Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_K08
(748 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 34 0.093
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 1.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 1.1
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 29 2.6
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 28 6.1
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 28 6.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 6.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 6.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 6.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 8.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 8.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 8.1
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 34.3 bits (75), Expect = 0.093
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +2
Query: 383 FFPGAPXKRVFXXXPFXXGGXGPPXXXFXGGXXXPPPXGGG 505
FF P F P GG PP F GG PPP GG
Sbjct: 63 FFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGG 103
Score = 31.9 bits (69), Expect = 0.50
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = -2
Query: 624 KXXFFXXPPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGP 445
K FF PP P P P PP F PPP PP G P
Sbjct: 60 KPSFFIPPPVPN-----GFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAP 114
Query: 444 XPP 436
PP
Sbjct: 115 PPP 117
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 381 FFSRGPXXKGFFXXPXFXXGXXXPPXXXFXGGPXPPXPXGG 503
FF P GF P G PP G P PP GG
Sbjct: 63 FFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGG 103
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 503 PPPXXGGXGXPPKXXXGGXPXPXXKXG 423
PPP GG PP GG P P G
Sbjct: 76 PPPGPGGIPPPPPMFAGGIPPPPPMMG 102
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/75 (29%), Positives = 22/75 (29%), Gaps = 1/75 (1%)
Frame = -1
Query: 613 FXXPPPPXKKKXXXXKXXPPXXXKXXXXPPXF-FXXXXPPXGXGGXGPPXKXXXGGXXXP 437
F PPPP P PP F P G GG GPP GG P
Sbjct: 364 FGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPP---PPGGPGAP 420
Query: 436 XXKXGXXKNPFXXGP 392
P GP
Sbjct: 421 GSYGPPQGGPGGFGP 435
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Frame = -2
Query: 603 PPP---PXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGPXPP 436
PPP P + + P P PP F PPP G P GP PP
Sbjct: 671 PPPMGFPFQHQLTQLPGQPRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPP 729
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -2
Query: 528 PPFFXXXXPPPXGGGXXXPPXXXXXGGPXPPF 433
PP F PPP G PP GP P F
Sbjct: 88 PPCFGPACPPPCFGPACAPPAPIIVNGPPPCF 119
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -2
Query: 528 PPFFXXXXPPPXGGGXXXPPXXXXXGGPXPPFXXGXKXKTLFXGAPGKKIP 376
PP PP GG PP GGP P G G PG +P
Sbjct: 174 PPGHGGMGGPPGHGGQGGPPGHGGMGGPPP--GQGGPGGPGGPGGPGGMLP 222
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -2
Query: 528 PPFFXXXXPPPXGGGXXXPPXXXXXGGPXPPFXXGXKXKTLFXGAPGKKIP 376
PP PP GG PP GGP P G G PG +P
Sbjct: 454 PPGHGGMGGPPGHGGQGGPPGHGGMGGPPP--GQGGPGGPGGPGGPGGMLP 502
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGPXPP 436
PPPP P PP PPP G PP G P PP
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS---PPPPPAGGSPPPP 292
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/69 (28%), Positives = 20/69 (28%)
Frame = -2
Query: 642 PPXXKKKXXFFXXPPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXX 463
PP PPPP P P PP PPP GG PP
Sbjct: 242 PPKGSPPLAGSGSPPPPPAA-----GSPPPPRTGSPPPPP--TGSPPPPPAGGSPPPPRA 294
Query: 462 XXXGGPXPP 436
P PP
Sbjct: 295 GSPPPPPPP 303
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGPXPP 436
PPPP P PP PPP G PP G P PP
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS---PPPPPAGGSPPPP 313
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/69 (28%), Positives = 20/69 (28%)
Frame = -2
Query: 642 PPXXKKKXXFFXXPPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXX 463
PP PPPP P P PP PPP GG PP
Sbjct: 263 PPKGSPPLAGSGSPPPPPAA-----GSPPPPRTGSPPPPP--TGSPPPPPAGGSPPPPRA 315
Query: 462 XXXGGPXPP 436
P PP
Sbjct: 316 GSPPPPPPP 324
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXXXGGPXPP 436
PPPP P PP PPP G PP G P PP
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGS---PPPPPAGGSPPPP 298
Score = 28.3 bits (60), Expect = 6.1
Identities = 20/69 (28%), Positives = 20/69 (28%)
Frame = -2
Query: 642 PPXXKKKXXFFXXPPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXX 463
PP PPPP P P PP PPP GG PP
Sbjct: 248 PPKGSPPLAGSGSPPPPPAA-----GSPPPPRTGSPPPPP--TGSPPPPPAGGSPPPPRA 300
Query: 462 XXXGGPXPP 436
P PP
Sbjct: 301 GSPPPPPPP 309
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 5/61 (8%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXX-----XGGPXP 439
PPPP P PP PPP G PP GGP P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 438 P 436
P
Sbjct: 787 P 787
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 450 PPXXXFXGGPXPPXPXG 500
PP F GGP PP P G
Sbjct: 775 PPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 5/61 (8%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXX-----XGGPXP 439
PPPP P PP PPP G PP GGP P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 438 P 436
P
Sbjct: 787 P 787
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 450 PPXXXFXGGPXPPXPXG 500
PP F GGP PP P G
Sbjct: 775 PPPGGFKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 5/61 (8%)
Frame = -2
Query: 603 PPPPXKKKXXXKXXXPXXXKKXPXXPPFFXXXXPPPXGGGXXXPPXXXX-----XGGPXP 439
PPPP P PP PPP G PP GGP P
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Query: 438 P 436
P
Sbjct: 370 P 370
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 450 PPXXXFXGGPXPPXPXG 500
PP F GGP PP P G
Sbjct: 358 PPPGGFKGGPPPPPPPG 374
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,164,049
Number of Sequences: 27780
Number of extensions: 215412
Number of successful extensions: 798
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 596
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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