Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_K05
(1190 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 30 2.8
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 30 2.8
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 30 3.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.9
Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 29 6.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 6.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 8.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 8.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 8.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 8.5
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/57 (31%), Positives = 21/57 (36%)
Frame = -2
Query: 493 PXXPXPXGXPPGPRPXLKXGNSPPFXPQEXRGGGXPPXQKXXLXKXPGARYXAXPPP 323
P P P P P + +PP Q G G PP Q G +Y PPP
Sbjct: 599 PQAP-PVQAAPAPVQAPQAPQAPPQAYQGYGGPGGPPQQAYRYPPQQGQQYSPYPPP 654
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 30.3 bits (65), Expect = 2.8
Identities = 18/57 (31%), Positives = 21/57 (36%)
Frame = -2
Query: 493 PXXPXPXGXPPGPRPXLKXGNSPPFXPQEXRGGGXPPXQKXXLXKXPGARYXAXPPP 323
P P P P P + +PP Q G G PP Q G +Y PPP
Sbjct: 599 PQAP-PVQAAPAPVQAPQAPQAPPQAYQGYGGPGGPPQQAYRYPPQQGQQYSPYPPP 654
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 29.9 bits (64), Expect = 3.7
Identities = 17/60 (28%), Positives = 21/60 (35%)
Frame = -2
Query: 502 WXXPXXPXPXGXPPGPRPXLKXGNSPPFXPQEXRGGGXPPXQKXXLXKXPGARYXAXPPP 323
W P P G PP P + PPF P PP ++ + P PPP
Sbjct: 29 WFFPGPLRPWGPPP---PWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRPPWGLPPPPPP 85
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 4.9
Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Frame = -3
Query: 522 PPNPNLVGPXRXG----LXPXGXRRGPGLX*RXVIPPPFXPRXXGGGGXPPPKXXXXIKX 355
PP P+ GP G P G R G+ PPP P G PPP
Sbjct: 319 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMP---PPPPPRYPSAGPGMYPPPPPSRPPAPP 375
Query: 354 XGQDIXPXPP 325
G + P PP
Sbjct: 376 SGHGMIPPPP 385
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/71 (28%), Positives = 21/71 (29%), Gaps = 1/71 (1%)
Frame = -2
Query: 505 GWXXPXXPXPXGXPPGPRPXLKXGNSPPFXPQEXRGGGXPPXQKXXLXKXPG-ARYXAXP 329
G P P P P P P P P G PP + PG P
Sbjct: 258 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 317
Query: 328 PPXXXIIFLPP 296
PP F PP
Sbjct: 318 PPPPPSRFGPP 328
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 4.9
Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Frame = -3
Query: 522 PPNPNLVGPXRXG----LXPXGXRRGPGLX*RXVIPPPFXPRXXGGGGXPPPKXXXXIKX 355
PP P+ GP G P G R G+ PPP P G PPP
Sbjct: 329 PPPPSRFGPPGMGGMPPPPPPGMRYPGGMP---PPPPPRYPSAGPGMYPPPPPSRPPAPP 385
Query: 354 XGQDIXPXPP 325
G + P PP
Sbjct: 386 SGHGMIPPPP 395
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/71 (28%), Positives = 21/71 (29%), Gaps = 1/71 (1%)
Frame = -2
Query: 505 GWXXPXXPXPXGXPPGPRPXLKXGNSPPFXPQEXRGGGXPPXQKXXLXKXPG-ARYXAXP 329
G P P P P P P P P G PP + PG P
Sbjct: 268 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 327
Query: 328 PPXXXIIFLPP 296
PP F PP
Sbjct: 328 PPPPPSRFGPP 338
>Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 29.1 bits (62), Expect = 6.5
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -2
Query: 442 KXGNSPPFXPQEXRGGGXPPXQKXXLXKXPGARYXAXPPP 323
K N PP PQ+ G PP Q+ P Y + PPP
Sbjct: 136 KPANPPPNAPQQG-PGAQPPQQQNNGGYVPPTVYPSAPPP 174
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 6.5
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -2
Query: 472 GXPPGPRPXLKXGNSPPFXPQEXRG 398
G PP P + G PPF P+ RG
Sbjct: 795 GGPPPPHFDRRGGGGPPFRPENGRG 819
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 8.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 1035 PPPPPXFFXGXPPAXP 988
PPPPP F G PP P
Sbjct: 84 PPPPPMFAGGIPPPPP 99
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 8.5
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -2
Query: 493 PXXPXPXGXPP-GPRPXLKXGNSPPFXPQEXRGGGXPPXQK 374
P P P G PP G P + G SPP P PP QK
Sbjct: 298 PPPPPPRGSPPTGSLPPPQAGGSPP--PAGTGSPPPPPRQK 336
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 8.5
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -2
Query: 493 PXXPXPXGXPP-GPRPXLKXGNSPPFXPQEXRGGGXPPXQK 374
P P P G PP G P + G SPP P PP QK
Sbjct: 319 PPPPPPRGSPPTGSLPPPQAGGSPP--PAGTGSPPPPPRQK 357
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 8.5
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = -2
Query: 493 PXXPXPXGXPP-GPRPXLKXGNSPPFXPQEXRGGGXPPXQK 374
P P P G PP G P + G SPP P PP QK
Sbjct: 304 PPPPPPRGSPPTGSLPPPQAGGSPP--PAGTGSPPPPPRQK 342
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,876,685
Number of Sequences: 27780
Number of extensions: 236557
Number of successful extensions: 850
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3265985354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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