Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_J17
(664 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.24
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.73
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.73
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.73
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 0.96
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 0.96
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 1.3
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 30 1.7
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 30 1.7
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 2.2
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 2.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 2.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 2.9
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 2.9
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 28 6.8
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 28 6.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 6.8
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 27 9.0
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 27 9.0
AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math ... 27 9.0
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 460 PPPXKKGGGXXFFPPXXGGGXXXXXPXXKXGXXPPPPP 573
PPP G F PP G G P G PPPPP
Sbjct: 66 PPPVPNG----FIPPPPGPGGIPPPPPMFAGGIPPPPP 99
Score = 31.9 bits (69), Expect = 0.42
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -1
Query: 523 FXPPPXXGEKXXXPPPFFXGGGXPXXXXFXXXXKXXXPPPKNPPXRXXXGPPTPP 359
F PPP PPP F GG P PPP PP PP PP
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMM-----GGIPPP--PPMFGAPPPPPPP 120
Score = 31.1 bits (67), Expect = 0.73
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +1
Query: 424 FXKXKXGRXXXXPPPXKKGGGXXFFPPXXGGGXXXXXPXXKXGXXPPPPP 573
F G PPP GG PP GG P G PPPPP
Sbjct: 73 FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGG---IPPPPPMFGAPPPPPP 119
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = +3
Query: 453 GXPPPXKKGGGXXFFSPXXGGGXXXXXPPXKXXGXXPPPPPXF 581
G PP GG P GG PP G PPPPP F
Sbjct: 72 GFIPPPPGPGGIPPPPPMFAGGIP---PPPPMMGGIPPPPPMF 111
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 459 PPPXKKGGGXXFFSPXXGGGXXXXXPPXKXXGXXPPPPP 575
PPP GG P GG PP PPPPP
Sbjct: 85 PPPPMFAGGIPPPPPMMGG---IPPPPPMFGAPPPPPPP 120
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.1 bits (67), Expect = 0.73
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 453 GXPPPXKKGGGXXFFSPXXGGGXXXXXPPXKXXGXXPPPPP 575
G PPP GG P GG PP PPPPP
Sbjct: 740 GGPPPPPPPGGL----PPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 31.1 bits (67), Expect = 0.73
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 453 GXPPPXKKGGGXXFFSPXXGGGXXXXXPPXKXXGXXPPPPP 575
G PPP GG P GG PP PPPPP
Sbjct: 741 GPPPPPPPGG----LPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 31.1 bits (67), Expect = 0.73
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -3
Query: 515 PPXXGGKKXXPPPFFXGGGXXXXRPXXXFXKKXXPPPXKPPFXXXXWAPNPP 360
PP GG PPP GG P K PPP PP AP P
Sbjct: 752 PPISGGPPPPPPP--PGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Frame = -1
Query: 514 PPXXGEKXXXPPPFFX---GGGXPXXXXFXXXXKXXXPPPKNPPXRXXXGPPTPP 359
PP G PPP GG P PPP PP GPP PP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPP--PPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +1
Query: 460 PPPXKKGGGXXFFPPXXGGGXXXXXPXXKXGXXPPPPPXXF 582
PPP GG PP GG K G PPPPP F
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGF-------KGGPPPPPPPGMF 793
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 465 PXKKGGGXXFFSPXXGGGXXXXXPPXKXXGXXPPPPP 575
P GG P GG P G PPPPP
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPP 732
Score = 27.9 bits (59), Expect = 6.8
Identities = 22/75 (29%), Positives = 22/75 (29%), Gaps = 5/75 (6%)
Frame = -3
Query: 569 GGGGXXPXFXXGXXXXXP-PPXXGGKKXXPPPF----FXGGGXXXXRPXXXFXKKXXPPP 405
GG P G PP GG PPP GG P PPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 404 XKPPFXXXXWAPNPP 360
PP P PP
Sbjct: 761 PPPPPGGCPPPPPPP 775
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 569 GGGGXXPXFXXGXXXXXPPPXXGGKKXXPPP 477
GG P G PPP GG K PPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.1 bits (67), Expect = 0.73
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 453 GXPPPXKKGGGXXFFSPXXGGGXXXXXPPXKXXGXXPPPPP 575
G PPP GG P GG PP PPPPP
Sbjct: 740 GGPPPPPPPGGL----PPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 31.1 bits (67), Expect = 0.73
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 453 GXPPPXKKGGGXXFFSPXXGGGXXXXXPPXKXXGXXPPPPP 575
G PPP GG P GG PP PPPPP
Sbjct: 741 GPPPPPPPGG----LPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 31.1 bits (67), Expect = 0.73
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -3
Query: 515 PPXXGGKKXXPPPFFXGGGXXXXRPXXXFXKKXXPPPXKPPFXXXXWAPNPP 360
PP GG PPP GG P K PPP PP AP P
Sbjct: 752 PPISGGPPPPPPP--PGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 801
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Frame = -1
Query: 514 PPXXGEKXXXPPPFFX---GGGXPXXXXFXXXXKXXXPPPKNPPXRXXXGPPTPP 359
PP G PPP GG P PPP PP GPP PP
Sbjct: 736 PPITGGPPPPPPPGGLPPISGGPPPPPP--PPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +1
Query: 460 PPPXKKGGGXXFFPPXXGGGXXXXXPXXKXGXXPPPPPXXF 582
PPP GG PP GG K G PPPPP F
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGF-------KGGPPPPPPPGMF 793
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 465 PXKKGGGXXFFSPXXGGGXXXXXPPXKXXGXXPPPPP 575
P GG P GG P G PPPPP
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPP 732
Score = 27.9 bits (59), Expect = 6.8
Identities = 22/75 (29%), Positives = 22/75 (29%), Gaps = 5/75 (6%)
Frame = -3
Query: 569 GGGGXXPXFXXGXXXXXP-PPXXGGKKXXPPPF----FXGGGXXXXRPXXXFXKKXXPPP 405
GG P G PP GG PPP GG P PPP
Sbjct: 701 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 404 XKPPFXXXXWAPNPP 360
PP P PP
Sbjct: 761 PPPPPGGCPPPPPPP 775
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 569 GGGGXXPXFXXGXXXXXPPPXXGGKKXXPPP 477
GG P G PPP GG K PPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.1 bits (67), Expect = 0.73
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 453 GXPPPXKKGGGXXFFSPXXGGGXXXXXPPXKXXGXXPPPPP 575
G PPP GG P GG PP PPPPP
Sbjct: 323 GGPPPPPPPGGL----PPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 31.1 bits (67), Expect = 0.73
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 453 GXPPPXKKGGGXXFFSPXXGGGXXXXXPPXKXXGXXPPPPP 575
G PPP GG P GG PP PPPPP
Sbjct: 324 GPPPPPPPGG----LPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 31.1 bits (67), Expect = 0.73
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -3
Query: 515 PPXXGGKKXXPPPFFXGGGXXXXRPXXXFXKKXXPPPXKPPFXXXXWAPNPP 360
PP GG PPP GG P K PPP PP AP P
Sbjct: 335 PPISGGPPPPPPP--PGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIP 384
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 3/55 (5%)
Frame = -1
Query: 514 PPXXGEKXXXPPPFFX---GGGXPXXXXFXXXXKXXXPPPKNPPXRXXXGPPTPP 359
PP G PPP GG P PPP PP GPP PP
Sbjct: 319 PPITGGPPPPPPPGGLPPISGGPPPPPP--PPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +1
Query: 460 PPPXKKGGGXXFFPPXXGGGXXXXXPXXKXGXXPPPPPXXF 582
PPP GG PP GG K G PPPPP F
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGF-------KGGPPPPPPPGMF 376
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 465 PXKKGGGXXFFSPXXGGGXXXXXPPXKXXGXXPPPPP 575
P GG P GG P G PPPPP
Sbjct: 279 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPP 315
Score = 27.9 bits (59), Expect = 6.8
Identities = 22/75 (29%), Positives = 22/75 (29%), Gaps = 5/75 (6%)
Frame = -3
Query: 569 GGGGXXPXFXXGXXXXXP-PPXXGGKKXXPPPF----FXGGGXXXXRPXXXFXKKXXPPP 405
GG P G PP GG PPP GG P PPP
Sbjct: 284 GGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Query: 404 XKPPFXXXXWAPNPP 360
PP P PP
Sbjct: 344 PPPPPGGCPPPPPPP 358
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 569 GGGGXXPXFXXGXXXXXPPPXXGGKKXXPPP 477
GG P G PPP GG K PPP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.7 bits (66), Expect = 0.96
Identities = 23/69 (33%), Positives = 24/69 (34%)
Frame = -1
Query: 568 GGGXXPXFFXGGXXXFXPPPXXGEKXXXPPPFFXGGGXPXXXXFXXXXKXXXPPPKNPPX 389
GG P G PPP G PPP GG P + PPP PP
Sbjct: 1557 GGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLM--GGPP--------PRLGMPPPGPPPP 1606
Query: 388 RXXXGPPTP 362
GPP P
Sbjct: 1607 N--GGPPPP 1613
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.7 bits (66), Expect = 0.96
Identities = 23/71 (32%), Positives = 24/71 (33%), Gaps = 2/71 (2%)
Frame = -1
Query: 565 GGXXPXFFXGGXXX--FXPPPXXGEKXXXPPPFFXGGGXPXXXXFXXXXKXXXPPPKNPP 392
G P F G F PPP G PPP F GG PPP +
Sbjct: 754 GAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGG----------RGGHGGPPPPHFD 803
Query: 391 XRXXXGPPTPP 359
R GPP P
Sbjct: 804 RRGGGGPPFRP 814
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 5/46 (10%)
Frame = +3
Query: 459 PPPXKKGGGXXF-FSPXXGGGXXXXXPPXK----XXGXXPPPPPXF 581
PPP +G G F P GG PP G PPPP F
Sbjct: 757 PPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHF 802
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 459 PPPXKKGGGXXFFSPXXGGGXXXXXPPXKXXGXXPPPPPXF 581
PPP G + P GG PP G PPP F
Sbjct: 411 PPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGF 451
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = -3
Query: 572 GGGGGXXPXFXXGXXXXXPPPXXGGKKXXPPPFFXGGGXXXXRPXXXFXKKXXPPPXKP 396
G GGG F PPP GG P+ GGG RP + PPP +P
Sbjct: 56 GNGGG----FGGNNYNNGPPPFDGGYNR---PYGGGGGGGYGRP-QGYVPPPPPPPTQP 106
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 2/62 (3%)
Frame = -1
Query: 538 GGXXXFXPPPXXGEKXXX--PPPFFXGGGXPXXXXFXXXXKXXXPPPKNPPXRXXXGPPT 365
G + PPP G PPP G P F + P P P GP
Sbjct: 94 GPPRGYPPPPPQGADTWRGAPPPAHHGHFGPPGHHFQGPPQHFPPGPPRPHFPGPPGPHR 153
Query: 364 PP 359
PP
Sbjct: 154 PP 155
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/61 (34%), Positives = 22/61 (36%), Gaps = 5/61 (8%)
Frame = -1
Query: 523 FXPPPXXGEKXXXPPPFFXGGG-----XPXXXXFXXXXKXXXPPPKNPPXRXXXGPPTPP 359
F PPP G PPP F G G P F PP +P G P PP
Sbjct: 295 FFPPPPRGH-FPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHP--MMFRGGPYPP 351
Query: 358 F 356
F
Sbjct: 352 F 352
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/61 (34%), Positives = 22/61 (36%), Gaps = 5/61 (8%)
Frame = -1
Query: 523 FXPPPXXGEKXXXPPPFFXGGG-----XPXXXXFXXXXKXXXPPPKNPPXRXXXGPPTPP 359
F PPP G PPP F G G P F PP +P G P PP
Sbjct: 295 FFPPPPRGH-FPPPPPHFMGRGMPPPFMPPPPHFGMGPPRGFMPPPHP--MMFRGGPYPP 351
Query: 358 F 356
F
Sbjct: 352 F 352
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -1
Query: 517 PPPXXGEKXXXPPPFFXGGGXPXXXXFXXXXKXXXPPPKNPPXRXXXGPPTPP 359
PPP + PP P F PPP P R G P PP
Sbjct: 299 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP 351
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +3
Query: 453 GXPPPXKKGGGXXFFSPXXGGGXXXXXPPXKXXGXXPPPPP 575
G PPP F P GG P + G PPPPP
Sbjct: 315 GMPPPPPPS---RFGPPGMGGMPPPPPPGMRYPGGMPPPPP 352
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -1
Query: 517 PPPXXGEKXXXPPPFFXGGGXPXXXXFXXXXKXXXPPPKNPPXRXXXGPPTPP 359
PPP + PP P F PPP P R G P PP
Sbjct: 309 PPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPP 361
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +3
Query: 453 GXPPPXKKGGGXXFFSPXXGGGXXXXXPPXKXXGXXPPPPP 575
G PPP F P GG P + G PPPPP
Sbjct: 325 GMPPPPPPS---RFGPPGMGGMPPPPPPGMRYPGGMPPPPP 362
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 453 GXPPPXKKGGGXXFFSPXXGGGXXXXXPPXKXXGXXPPPP 572
G PPP G S G PP K G PPPP
Sbjct: 72 GTPPPPPTGEPQDL-SAEEGNASRRPPPPPKGTGTPPPPP 110
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/52 (28%), Positives = 18/52 (34%)
Frame = +3
Query: 363 GVGGPXXXLKGGFXGGGXXFFXKXXXXXXXGXPPPXKKGGGXXFFSPXXGGG 518
G G P GGG + PPP GGG + +P G G
Sbjct: 36 GGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGGPG 87
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/52 (28%), Positives = 18/52 (34%)
Frame = +3
Query: 363 GVGGPXXXLKGGFXGGGXXFFXKXXXXXXXGXPPPXKKGGGXXFFSPXXGGG 518
G G P GGG + PPP GGG + +P G G
Sbjct: 36 GGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGGPG 87
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 27.9 bits (59), Expect = 6.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 412 PPPKNPPXRXXXGPPTPP 359
PPP PP GPP PP
Sbjct: 576 PPPPPPPPPMLGGPPPPP 593
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 27.5 bits (58), Expect = 9.0
Identities = 30/114 (26%), Positives = 31/114 (27%), Gaps = 4/114 (3%)
Frame = +3
Query: 303 APPPXNXKIFXGIXXXXXKGGVGGPXXXLKGGFXGGGXXFFXKXXXXXXXGXPPPXKKGG 482
APP + GG GG GG GGG G GG
Sbjct: 69 APPAAYCPQVQPVYVQSGGGGCGGGGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGG 128
Query: 483 GXXFFSPXXGG-GXXXXXP---PXKXXGXXPPPPPXFXXXXXXXKKXXXXXGGG 632
G GG G P P G PPP P F GGG
Sbjct: 129 GGGGGGYASGGSGGFASAPVSLPAPSYGGPPPPAPSFSHAPSGGYSSGGSSGGG 182
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 412 PPPKNPPXRXXXGPPTPP 359
P P PP R GPP PP
Sbjct: 247 PGPPGPPTRRPPGPPGPP 264
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 412 PPPKNPPXRXXXGPPTPP 359
P P PP R GPP PP
Sbjct: 258 PGPPGPPTRRPPGPPGPP 275
>AF077540-8|AAC26310.2| 683|Caenorhabditis elegans Btb and math
domain containingprotein 47 protein.
Length = 683
Score = 27.5 bits (58), Expect = 9.0
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -1
Query: 478 PFFXGGGXPXXXXFXXXXKXXXPPPKNPPXRXXXGPPTPPFXXK 347
P F GG P PPPK P PP PP K
Sbjct: 363 PLFPSGGAPSSPSAPEAPSEP-PPPKIYPTLGANAPPAPPVQGK 405
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,542,216
Number of Sequences: 27780
Number of extensions: 303715
Number of successful extensions: 1345
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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