Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_J15
(641 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0083 + 631196-631675 31 1.0
03_06_0100 - 31647506-31647664,31647752-31647835,31647933-316480... 30 1.4
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 30 1.4
03_01_0129 - 1005010-1005042,1005227-1005413,1005516-1005763,100... 29 3.1
01_05_0423 + 22032940-22033695 29 3.1
01_03_0005 + 11568545-11569119,11569179-11569191 29 3.1
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 5.5
12_02_0416 - 18891945-18892319,18892416-18892550,18892634-18893638 25 6.3
05_01_0141 - 937428-937717,938483-938705 25 7.0
07_03_1136 + 24218601-24218734,24218769-24219906 28 7.2
07_01_0080 + 587674-588510 28 7.2
06_01_0522 + 3787054-3788004,3788094-3788422,3788640-3788796 28 7.2
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 28 7.2
02_05_0686 - 30900748-30902167,30903442-30904742 28 7.2
02_03_0279 + 17250347-17252098 24 8.1
>01_01_0083 + 631196-631675
Length = 159
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +3
Query: 357 GGGGKKKXXXPPXGGGGKXKKXXFFFXXPPPP 452
GGGG PP GGGG F + PPPP
Sbjct: 83 GGGGYIPYYQPPAGGGGGG--GGFNYPAPPPP 112
>03_06_0100 -
31647506-31647664,31647752-31647835,31647933-31648089,
31648181-31648446,31648524-31648796,31648874-31648985,
31649112-31649331,31649476-31649899
Length = 564
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +3
Query: 357 GGGGKKKXXXPPXGGGGKXKKXXFFFXXPPPPXXXG 464
GGGG K+ P G GK KK FF PP G
Sbjct: 49 GGGGVKREAIP--AGTGKAKKQVVFFDAAPPVSQRG 82
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1
Query: 548 PPXGGXXPPPPPP 510
PP GG PPPPPP
Sbjct: 298 PPVGGTQPPPPPP 310
>03_01_0129 -
1005010-1005042,1005227-1005413,1005516-1005763,
1006224-1006406
Length = 216
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +1
Query: 439 SPPPXXXXXKXKXFXXKKKXXXXXGGGGGGXXPP 540
+PPP K K GGGGGG PP
Sbjct: 9 APPPQQQRRNKSSAANKGKKGGASGGGGGGRWPP 42
>01_05_0423 + 22032940-22033695
Length = 251
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 406 PPPPXGGXXXFFFPPPP 356
PPPP G F PPPP
Sbjct: 169 PPPPQGQQQLLFLPPPP 185
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +3
Query: 390 PXGGGGKXKKXXFFFXXPPPPXXXGXXKXFXXKKKXKXXXXGGGGGXXPPXGGXXXXXXX 569
P GGGG + PPPP G GGGG GG
Sbjct: 76 PSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGGG--GGGWQQGGGG 133
Query: 570 XXFXXXPPPP 599
PPPP
Sbjct: 134 GGAYPTPPPP 143
Score = 28.3 bits (60), Expect = 5.5
Identities = 25/85 (29%), Positives = 27/85 (31%), Gaps = 4/85 (4%)
Frame = +3
Query: 357 GGGGKKKXXXPPX---GGGGKXKKXXFFFXXPPPPXXXGXXKXFXXKKKXKXXXXGGGGG 527
GGGG PP GGGG PPP G + GGGGG
Sbjct: 83 GGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGGGGGGWQQ-------GGGGGG 135
Query: 528 XXP-PXGGXXXXXXXXXFXXXPPPP 599
P P + PPPP
Sbjct: 136 AYPTPPPPNPFLPYFPFYYYSPPPP 160
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 406 PPPPXGGXXXFFFPPPP 356
PPPP G F PPPP
Sbjct: 550 PPPPPSGNKPAFSPPPP 566
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 406 PPPPXGGXXXFFFPPPP 356
PPPP G F PPPP
Sbjct: 551 PPPPSGNKPAFSPPPPP 567
>12_02_0416 - 18891945-18892319,18892416-18892550,18892634-18893638
Length = 504
Score = 24.6 bits (51), Expect(2) = 6.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 527 PPPPPPXXXFXFFF 486
PPPPPP F F +
Sbjct: 173 PPPPPPVSLFRFSY 186
Score = 21.8 bits (44), Expect(2) = 6.3
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1
Query: 539 GGXXPPPPPP 510
GG PPP PP
Sbjct: 165 GGAPPPPSPP 174
>05_01_0141 - 937428-937717,938483-938705
Length = 170
Score = 24.6 bits (51), Expect(2) = 7.0
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = -2
Query: 598 GGGGXXKKXXXXXXXXXPPXGGXXPPPPP 512
GGGG PP PPPPP
Sbjct: 23 GGGGGHGYPYPPQQGYYPPPPTAYPPPPP 51
Score = 21.8 bits (44), Expect(2) = 7.0
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 406 PPPPXGGXXXFFFPP 362
PPPP G + +PP
Sbjct: 48 PPPPAGYGGGYGYPP 62
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/64 (31%), Positives = 23/64 (35%)
Frame = +3
Query: 357 GGGGKKKXXXPPXGGGGKXKKXXFFFXXPPPPXXXGXXKXFXXKKKXKXXXXGGGGGXXP 536
GGGG PP GGG + PP P G ++ GGG P
Sbjct: 111 GGGGGGPPSLPPGAGGGGGAR-------PPAPGGGGGG---GAPRRVLGGGGGGGALARP 160
Query: 537 PXGG 548
P GG
Sbjct: 161 PGGG 164
>07_01_0080 + 587674-588510
Length = 278
Score = 27.9 bits (59), Expect = 7.2
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 548 PPXGGXXPPPPPP 510
PP G PPPPPP
Sbjct: 98 PPSSGSPPPPPPP 110
>06_01_0522 + 3787054-3788004,3788094-3788422,3788640-3788796
Length = 478
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 536 GXXPPPPPPXXXFXFFF 486
G PPPPPP F FF
Sbjct: 48 GVAPPPPPPLTVFRHFF 64
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 27.9 bits (59), Expect = 7.2
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = -2
Query: 547 PPXGGXXPPPPPXXXXLXFFXXXKXXFXPXXXGGGGXXKKKXXFXXFPPPPXGGXXXFFF 368
PP G PPPP L P G GG PPPP GG
Sbjct: 1114 PPGGITGVPPPPPIGGLG--GHQAPPAPPLPEGIGGVP---------PPPPVGGLGGPPA 1162
Query: 367 PPPP 356
PPPP
Sbjct: 1163 PPPP 1166
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -2
Query: 547 PPXGGXXPPPPPXXXXLXFFXXXKXXFXPXXXGGGGXXKKKXXFXXFPPPPXGGXXXFFF 368
P PPPPP K P G PPPP GG
Sbjct: 319 PKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPP 378
Query: 367 PPPP 356
PPPP
Sbjct: 379 PPPP 382
>02_03_0279 + 17250347-17252098
Length = 583
Score = 23.8 bits (49), Expect(2) = 8.1
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 548 PPXGGXXPPPPPP 510
PP PPPPPP
Sbjct: 124 PPPPPPPPPPPPP 136
Score = 22.2 bits (45), Expect(2) = 8.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1
Query: 527 PPPPPPXXXF 498
PPPPPP F
Sbjct: 129 PPPPPPPPLF 138
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,136,939
Number of Sequences: 37544
Number of extensions: 413127
Number of successful extensions: 5158
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4120
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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