Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_J14
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71181-6|CAA94899.1|  647|Caenorhabditis elegans Hypothetical pr...   163   9e-41
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass...    30   2.0  
AF022985-15|AAB69969.2|  435|Caenorhabditis elegans Hypothetical...    29   4.7  
AC084158-15|AAK68556.1|  190|Caenorhabditis elegans Hypothetical...    29   4.7  
AC006816-3|AAK85510.3|  508|Caenorhabditis elegans Hypothetical ...    29   4.7  
Z74040-6|CAA98509.2|  457|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AC024810-3|AAU20831.1|  660|Caenorhabditis elegans Vasa- and bel...    28   6.2  
AC024810-2|AAK68520.1|  644|Caenorhabditis elegans Vasa- and bel...    28   6.2  
AC024810-1|AAF60764.1|  641|Caenorhabditis elegans Vasa- and bel...    28   6.2  
U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical pr...    28   8.1  
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr...    28   8.1  
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z71181-6|CAA94899.1|  647|Caenorhabditis elegans Hypothetical
           protein K07C5.6 protein.
          Length = 647

 Score =  163 bits (397), Expect = 9e-41
 Identities = 72/163 (44%), Positives = 106/163 (65%)
 Frame = -2

Query: 509 SGXTAQHAAAQLFAWEARAHGLDLHLLAEPTKLQMLQAHYKRDQQRYKSQVKQSILEKYG 330
           SG       AQ+FAW+A   G+  H +AEPTKL+ L+  Y++++   K++ ++ +L+KYG
Sbjct: 294 SGEVTAANEAQVFAWQATRGGVYAHSIAEPTKLEALKKEYEKEKSTLKNETQKELLDKYG 353

Query: 329 GEEHLQSVPRELLLAQTEVFTRYNRDGTLVSGAEKQLAKSKYEEDALINNHTTVWGSYWR 150
           G EH++    ELLLAQTE +  YNR G ++ G EK    S+++ED    NHT+V+GS+WR
Sbjct: 354 GGEHMERPADELLLAQTESYIEYNRKGKVIKGKEKVAISSRFKEDIYPQNHTSVFGSFWR 413

Query: 149 DGQWGYKCCHSFIKMSYCVGEAGKTVVLPVSDDKKLSTSTDGI 21
           +G+WGYKCCH F+K SYC G+ G  +    S  K  +TS + I
Sbjct: 414 EGRWGYKCCHQFVKNSYCTGKQG--IEAETSAAKGTTTSNEEI 454



 Score = 35.1 bits (77), Expect = 0.054
 Identities = 21/51 (41%), Positives = 26/51 (50%)
 Frame = -3

Query: 688 DXKQRITVXNLXIPGGHSQVPAEXWTPNSAXYDPKTRXMRDNPTPNVPEXE 536
           D + RITV NL I    ++        NS  YDPK+R MR+NP   V   E
Sbjct: 230 DSRTRITVRNLRIREDTAKYLYNL-AENSPYYDPKSRSMRENPFAGVAGKE 279


>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 59 protein.
          Length = 1592

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/48 (22%), Positives = 27/48 (56%)
 Frame = -2

Query: 437 HLLAEPTKLQMLQAHYKRDQQRYKSQVKQSILEKYGGEEHLQSVPREL 294
           H      +++ L+AHY+R Q+  +  V+Q  +E  G  + ++ + +++
Sbjct: 687 HTAQSEQEMKQLEAHYERAQKMLQDNVEQMNVENRGLRDEIEKLSQQM 734



 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -2

Query: 131 KCCHSFIKMSYCVGEAGKTVVLPVSDDKKLSTSTDGIKQKK 9
           +CC+S ++   C+ E  ++V   +S  KKL  S D  +  K
Sbjct: 47  ECCNSTLRKEKCIAEFVESVKTVISKAKKLRLSRDDFEVLK 87


>AF022985-15|AAB69969.2|  435|Caenorhabditis elegans Hypothetical
           protein T15B7.16 protein.
          Length = 435

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 643 GHSQVPAEXWTPNSAXYDPKTRXMRDNPTPNV 548
           G+S V  + WTPN    + K   +  +PTPN+
Sbjct: 108 GYSMVE-KLWTPNVCFVNSKKTEIHSSPTPNI 138


>AC084158-15|AAK68556.1|  190|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.12 protein.
          Length = 190

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 434 LLAEPTKLQMLQAHYKRDQQRYKSQVKQSILEKYG 330
           LL     LQ ++AH K++  R+KS  + S  +K G
Sbjct: 89  LLETQANLQKIRAHMKKNALRHKSDTRTSKFKKMG 123


>AC006816-3|AAK85510.3|  508|Caenorhabditis elegans Hypothetical
           protein Y71D11A.5 protein.
          Length = 508

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 616 WTPNSAXYDPKTRXMRDNPTPNV 548
           WTPNS   + KT  +  +P PN+
Sbjct: 146 WTPNSCFINSKTADIHKSPFPNI 168


>Z74040-6|CAA98509.2|  457|Caenorhabditis elegans Hypothetical
           protein K10D6.1 protein.
          Length = 457

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 634 QVPAEXWTPNSAXYDPKTRXMRDNPTPNV 548
           QV  + WTPNS   + K   + D+P  NV
Sbjct: 131 QVLEQLWTPNSCFVNSKFAEIHDSPFKNV 159


>Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical protein
            F11A10.4 protein.
          Length = 1646

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -2

Query: 422  PTKLQMLQAHYKRDQQRYKSQVKQSILE-KYGGEEHLQSVPRELLLAQTEVFTRYNRDGT 246
            P  +Q++ A    D +   S V+Q  L  +    + LQS+P + +    E  +RY++  T
Sbjct: 876  PNVIQIISAIIDSDTECELSLVRQGYLGLRLVSSDFLQSIPFDCISGLVEAISRYSKQNT 935


>Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical protein
            F11A10.4 protein.
          Length = 1646

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -2

Query: 422  PTKLQMLQAHYKRDQQRYKSQVKQSILE-KYGGEEHLQSVPRELLLAQTEVFTRYNRDGT 246
            P  +Q++ A    D +   S V+Q  L  +    + LQS+P + +    E  +RY++  T
Sbjct: 876  PNVIQIISAIIDSDTECELSLVRQGYLGLRLVSSDFLQSIPFDCISGLVEAISRYSKQNT 935


>AC024810-3|AAU20831.1|  660|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform c protein.
          Length = 660

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -2

Query: 434 LLAEPTKLQMLQAHYKRDQQRYKSQVKQSILEKYGGEEH 318
           L+  PT+   +Q H +  +  YKS ++ +IL  YGG E+
Sbjct: 226 LVLSPTRELAIQIHKEATKFSYKSNIQTAIL--YGGREN 262


>AC024810-2|AAK68520.1|  644|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform b protein.
          Length = 644

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -2

Query: 434 LLAEPTKLQMLQAHYKRDQQRYKSQVKQSILEKYGGEEH 318
           L+  PT+   +Q H +  +  YKS ++ +IL  YGG E+
Sbjct: 210 LVLSPTRELAIQIHKEATKFSYKSNIQTAIL--YGGREN 246


>AC024810-1|AAF60764.1|  641|Caenorhabditis elegans Vasa- and
           belle-like helicase protein1, isoform a protein.
          Length = 641

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -2

Query: 434 LLAEPTKLQMLQAHYKRDQQRYKSQVKQSILEKYGGEEH 318
           L+  PT+   +Q H +  +  YKS ++ +IL  YGG E+
Sbjct: 207 LVLSPTRELAIQIHKEATKFSYKSNIQTAIL--YGGREN 243


>U80846-5|AAP82647.1|  825|Caenorhabditis elegans Hypothetical
           protein K06A9.1c protein.
          Length = 825

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -3

Query: 322 STSSPYPGSCCWPRPKCSPATTGTARSSAGQRS 224
           S++SP P S   P P  SPA+TG+  + +G  S
Sbjct: 318 SSTSPAPSSS--PNPSSSPASTGSTITISGSSS 348


>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
           protein K06A9.1a protein.
          Length = 1032

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -3

Query: 322 STSSPYPGSCCWPRPKCSPATTGTARSSAGQRS 224
           S++SP P S   P P  SPA+TG+  + +G  S
Sbjct: 525 SSTSPAPSSS--PNPSSSPASTGSTITISGSSS 555


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
           protein K06A9.1b protein.
          Length = 2232

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -3

Query: 322 STSSPYPGSCCWPRPKCSPATTGTARSSAGQRS 224
           S++SP P S   P P  SPA+TG+  + +G  S
Sbjct: 525 SSTSPAPSSS--PNPSSSPASTGSTITISGSSS 555


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,823,143
Number of Sequences: 27780
Number of extensions: 289440
Number of successful extensions: 1012
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1011
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)