Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_J10
(1013 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 0.71
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.75
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.75
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.75
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 30 2.3
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 30 2.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 3.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 3.0
L25598-5|AAM15550.1| 113|Caenorhabditis elegans Calpain family ... 30 3.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 29 5.3
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 5.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 5.3
AC024817-54|AAF59564.1| 229|Caenorhabditis elegans Hypothetical... 26 6.5
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 7.0
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 7.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 7.0
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 7.0
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 29 7.0
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 7.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 7.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 9.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 9.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 9.2
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 24 9.4
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 4.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1
Query: 584 PPPPPXXXKXNNXPPPP 534
PPPPP N PPPP
Sbjct: 538 PPPPPPVGMANGGPPPP 554
Score = 29.1 bits (62), Expect(2) = 0.71
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPP 532
PPPP PPPPPP
Sbjct: 540 PPPPVGMANGGPPPPPP 556
Score = 21.4 bits (43), Expect(2) = 0.71
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -3
Query: 549 PPPPPPXKXXXFF 511
PPPPPP F
Sbjct: 577 PPPPPPPPPSFMF 589
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.75
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPP 532
PPPP K PPPPPP
Sbjct: 774 PPPPGGFKGGPPPPPPP 790
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 614 PPRXXXXXXXPPPPPXXXKXNNXPPPP 534
PP PPPPP K PPPP
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPPXKXXXF 514
PPPP PPPPPP F
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGF 780
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -1
Query: 614 PPRXXXXXXXPPPPPXXXKXNNXPPPPXXKXXF 516
PP PPPPP PPPP F
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 583 PPPPPXXKXXTTXPPPP 533
PPPPP T PPPP
Sbjct: 713 PPPPPGLPPITGGPPPP 729
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.75
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPP 532
PPPP K PPPPPP
Sbjct: 774 PPPPGGFKGGPPPPPPP 790
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 614 PPRXXXXXXXPPPPPXXXKXNNXPPPP 534
PP PPPPP K PPPP
Sbjct: 763 PPPGGCPPPPPPPPPGGFKGGPPPPPP 789
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPPXKXXXF 514
PPPP PPPPPP F
Sbjct: 758 PPPPPPPPGGCPPPPPPPPPGGF 780
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -1
Query: 614 PPRXXXXXXXPPPPPXXXKXNNXPPPPXXKXXF 516
PP PPPPP PPPP F
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 583 PPPPPXXKXXTTXPPPP 533
PPPPP T PPPP
Sbjct: 713 PPPPPGLPPITGGPPPP 729
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.75
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPP 532
PPPP K PPPPPP
Sbjct: 357 PPPPGGFKGGPPPPPPP 373
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 614 PPRXXXXXXXPPPPPXXXKXNNXPPPP 534
PP PPPPP K PPPP
Sbjct: 346 PPPGGCPPPPPPPPPGGFKGGPPPPPP 372
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPPXKXXXF 514
PPPP PPPPPP F
Sbjct: 341 PPPPPPPPGGCPPPPPPPPPGGF 363
Score = 29.1 bits (62), Expect = 5.3
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -1
Query: 614 PPRXXXXXXXPPPPPXXXKXNNXPPPPXXKXXF 516
PP PPPPP PPPP F
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 583 PPPPPXXKXXTTXPPPP 533
PPPPP T PPPP
Sbjct: 296 PPPPPGLPPITGGPPPP 312
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 30.3 bits (65), Expect = 2.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPP 532
PPPP + PPPPPP
Sbjct: 298 PPPPIKEESPPPPPPPP 314
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPP 532
P PP K PPPPPP
Sbjct: 296 PIPPPPIKEESPPPPPP 312
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 30.3 bits (65), Expect = 2.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPP 532
PPPP + PPPPPP
Sbjct: 298 PPPPIKEESPPPPPPPP 314
Score = 28.3 bits (60), Expect = 9.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPP 532
P PP K PPPPPP
Sbjct: 296 PIPPPPIKEESPPPPPP 312
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 3.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPPXK 526
PPPP PPPPPP +
Sbjct: 288 PPPPSSGMWPPPPPPPPGR 306
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPP 532
PPPP PPPPPP
Sbjct: 287 PPPPPSSGMWPPPPPPP 303
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 3.0
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPPXK 526
PPPP PPPPPP +
Sbjct: 298 PPPPSSGMWPPPPPPPPGR 316
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPP 532
PPPP PPPPPP
Sbjct: 297 PPPPPSSGMWPPPPPPP 313
>L25598-5|AAM15550.1| 113|Caenorhabditis elegans Calpain family
protein 1, isoform c protein.
Length = 113
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +2
Query: 524 FFXGGGGGGCXXFXXXGGGGXXXXXXPXXGGVFL 625
FF GGGGGG GGGG GG+F+
Sbjct: 50 FFGGGGGGG----GGGGGGGFGGGNGGFGGGIFI 79
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 533 GGGGGGCXXFXXXGGGGXXXXXXPXXGG 616
GGGGGGC GGG P GG
Sbjct: 93 GGGGGGCGGGGGCGGGCAPPPPPPACGG 120
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 533 GGGGGGCXXFXXXGGGG 583
GGGGGGC GGGG
Sbjct: 73 GGGGGGCGGGGGCGGGG 89
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 533 GGGGGGCXXFXXXGGGG 583
GGGGGGC GGGG
Sbjct: 123 GGGGGGCGGGCGGGGGG 139
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.5 bits (63), Expect = 4.0
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 533 GGGGGGCXXFXXXGGGGXXXXXXPXXGG 616
GGGGGGC GGGG GG
Sbjct: 96 GGGGGGCGGGGGCGGGGGGGCGGGGGGG 123
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 533 GGGGGGCXXFXXXGGGG 583
GGGGGGC GGGG
Sbjct: 118 GGGGGGCGGGGGGGGGG 134
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPP 532
PPPP PPPPPP
Sbjct: 43 PPPPCGGGYEAPPPPPP 59
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPP 532
PPPP PPPPPP
Sbjct: 41 PPPPPMCGCAPPPPPPP 57
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPP 532
PPPP PPPPPP
Sbjct: 42 PPPPMCGCAPPPPPPPP 58
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPP 532
PPPP PPPPPP
Sbjct: 578 PPPPPPPMLGGPPPPPP 594
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPP 532
PPPP PPPPPP
Sbjct: 579 PPPPPPMLGGPPPPPPP 595
Score = 29.1 bits (62), Expect = 5.3
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPP 532
PPPP PPPPPP
Sbjct: 580 PPPPPMLGGPPPPPPPP 596
>AC024817-54|AAF59564.1| 229|Caenorhabditis elegans Hypothetical
protein Y54G2A.27 protein.
Length = 229
Score = 26.2 bits (55), Expect(2) = 6.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 700 FFFFFFFFXXXXXXPPP 650
FFFFFFFF PP
Sbjct: 177 FFFFFFFFSGRIDLTPP 193
Score = 21.0 bits (42), Expect(2) = 6.5
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -2
Query: 721 PPPPXXXFFFFFFFF 677
PP ++ FFFFF
Sbjct: 167 PPDVFYYYYCFFFFF 181
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPP 532
PPPP PPPPPP
Sbjct: 111 PPPPAPAAPCCPPPPPP 127
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 533 GGGGGGCXXFXXXGGGG 583
GGGGGGC GGGG
Sbjct: 91 GGGGGGCGGGGGCGGGG 107
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 533 GGGGGGCXXFXXXGGGGXXXXXXPXXGG 616
GGGGGGC GGGG P GG
Sbjct: 60 GGGGGGCG-----GGGGCAPPPAPCGGG 82
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 533 GGGGGGCXXFXXXGGGG 583
GGGGGGC GGGG
Sbjct: 91 GGGGGGCGGGGGCGGGG 107
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 533 GGGGGGCXXFXXXGGGGXXXXXXPXXGG 616
GGGGGGC GGGG P GG
Sbjct: 60 GGGGGGCG-----GGGGCAPPPAPCGGG 82
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPP 532
PPPP PPPPPP
Sbjct: 64 PPPPPPPPPMCPPPPPP 80
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 28.7 bits (61), Expect = 7.0
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -1
Query: 623 KKRPPRXXXXXXXPPPPPXXXKXNNXPPP 537
+K+PP PPPPP + PPP
Sbjct: 17 RKQPPPPPSPRRAPPPPPHRKPASLSPPP 45
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPP 535
PPPP QPPPPP
Sbjct: 95 PPPPPPHYYTQPPPPP 110
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 583 PPPPPXXKXXTTXPPPP 533
PPPPP T PPPP
Sbjct: 1343 PPPPPPSDDLTPVPPPP 1359
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPP 532
PPPP PPPPPP
Sbjct: 1345 PPPPSDDLTPVPPPPPP 1361
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = -2
Query: 658 PPPXXXXXXXX*KNAPXXXXXXXXXPPPPPXXKXXTTXPPPP 533
PPP +P PPPPP T PPP
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = -2
Query: 658 PPPXXXXXXXX*KNAPXXXXXXXXXPPPPPXXKXXTTXPPPP 533
PPP +P PPPPP T PPP
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 9.2
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = -2
Query: 658 PPPXXXXXXXX*KNAPXXXXXXXXXPPPPPXXKXXTTXPPPP 533
PPP +P PPPPP T PPP
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 23.8 bits (49), Expect(2) = 9.4
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -3
Query: 549 PPPPPPXKXXXFF 511
PPPPPP FF
Sbjct: 1012 PPPPPPPPPADFF 1024
Score = 22.6 bits (46), Expect(2) = 9.4
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = -3
Query: 582 PPPPXXXKXXQPPPPPP 532
P P PPPPPP
Sbjct: 1003 PKAPAGPGGPPPPPPPP 1019
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.147 0.459
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,835,975
Number of Sequences: 27780
Number of extensions: 219000
Number of successful extensions: 2664
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1593
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2667870690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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