Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_J06
(781 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC113562-1|AAI13563.1| 416|Homo sapiens hepatocyte cell adhesio... 36 0.22
BC104831-1|AAI04832.1| 416|Homo sapiens hepatocyte cell adhesio... 36 0.22
AY047587-1|AAQ93018.1| 416|Homo sapiens hypothetical protein pr... 36 0.22
AL834419-1|CAD39081.1| 165|Homo sapiens hypothetical protein pr... 36 0.22
AK098396-1|BAC05297.1| 416|Homo sapiens protein ( Homo sapiens ... 36 0.22
AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein. 35 0.38
BC013284-1|AAH13284.1| 276|Homo sapiens LOC642031 protein protein. 34 0.50
AJ251004-1|CAB61345.1| 1873|Homo sapiens integrin beta 4 protein. 34 0.66
AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein. 33 0.87
AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein. 33 0.87
AK096721-1|BAC04850.1| 180|Homo sapiens protein ( Homo sapiens ... 33 1.5
AL162741-4|CAI23246.1| 255|Homo sapiens tumor necrosis factor r... 32 2.0
AF241229-1|AAF63506.1| 255|Homo sapiens GITR-D protein. 32 2.0
M33518-1|AAA35586.1| 2142|Homo sapiens protein ( Human HLA-B-ass... 32 2.7
M33509-1|AAA35585.1| 2142|Homo sapiens protein ( Human HLA-B-ass... 32 2.7
BX511262-1|CAI95572.1| 2157|Homo sapiens HLA-B associated transc... 32 2.7
BC060668-1|AAH60668.1| 2157|Homo sapiens HLA-B associated transc... 32 2.7
BC042295-1|AAH42295.1| 2157|Homo sapiens BAT2 protein protein. 32 2.7
BC030127-1|AAH30127.1| 696|Homo sapiens Similar to HLA-B associ... 32 2.7
BA000025-31|BAB63391.1| 2157|Homo sapiens BAT2 protein. 32 2.7
AL805934-4|CAI18500.1| 2157|Homo sapiens HLA-B associated transc... 32 2.7
AL662847-63|CAI17698.2| 2157|Homo sapiens HLA-B associated trans... 32 2.7
AL662801-47|CAI18313.1| 2157|Homo sapiens HLA-B associated trans... 32 2.7
AB210034-1|BAE06116.1| 1537|Homo sapiens C6orf21 variant protein... 32 2.7
X52486-1|CAA36728.1| 326|Homo sapiens protein ( Human mRNA for ... 31 3.5
M87499-1|AAB05817.1| 324|Homo sapiens uracil-DNA glycosylase pr... 31 3.5
BC030225-1|AAH30225.1| 134|Homo sapiens SNX22 protein protein. 31 6.1
BC028012-1|AAH28012.1| 670|Homo sapiens PML-RARA regulated adap... 31 6.1
AJ272324-1|CAC17767.1| 718|Homo sapiens adaptor molecule-1 prot... 31 6.1
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila... 27 7.0
X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific proteo... 27 7.7
BC110827-1|AAI10828.1| 132|Homo sapiens DENND3 protein protein. 30 8.1
BC068551-1|AAH68551.1| 582|Homo sapiens LYN protein protein. 30 8.1
BC059394-1|AAH59394.1| 582|Homo sapiens LYN protein protein. 30 8.1
>BC113562-1|AAI13563.1| 416|Homo sapiens hepatocyte cell adhesion
molecule protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -1
Query: 409 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 308
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>BC104831-1|AAI04832.1| 416|Homo sapiens hepatocyte cell adhesion
molecule protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -1
Query: 409 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 308
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>AY047587-1|AAQ93018.1| 416|Homo sapiens hypothetical protein
protein.
Length = 416
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -1
Query: 409 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 308
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>AL834419-1|CAD39081.1| 165|Homo sapiens hypothetical protein
protein.
Length = 165
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -1
Query: 409 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 308
P GP GYS +PA P GR GLP R RR+
Sbjct: 78 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 110
>AK098396-1|BAC05297.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ25530 fis, clone CBR07652. ).
Length = 416
Score = 35.5 bits (78), Expect = 0.22
Identities = 17/34 (50%), Positives = 19/34 (55%)
Frame = -1
Query: 409 PTRQAGSGPAGYSGTPAAPSGRPDGLPYRDGRRF 308
P GP GYS +PA P GR GLP R RR+
Sbjct: 329 PRSATEPGPPGYSVSPAVP-GRSPGLPIRSARRY 361
>AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 34.7 bits (76), Expect = 0.38
Identities = 26/92 (28%), Positives = 32/92 (34%), Gaps = 2/92 (2%)
Frame = +2
Query: 158 LHSYTRRPIPSXCQNPDEVGGLPRSTLQPDGAAHP--KDAQPTEPSRRIEGSETSAVSVR 331
LH +P + +GG S P G + PS T V +
Sbjct: 2050 LHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLY 2109
Query: 332 QPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 427
Q PP RW P W RT LP R+ RR
Sbjct: 2110 QQASPPDALRWIP--KPWERTGLPPREGPSRR 2139
>BC013284-1|AAH13284.1| 276|Homo sapiens LOC642031 protein protein.
Length = 276
Score = 34.3 bits (75), Expect = 0.50
Identities = 41/135 (30%), Positives = 57/135 (42%), Gaps = 1/135 (0%)
Frame = +2
Query: 32 RTSYEVPAQKGRAGYVRLNDLHGVVSRPRAQGILEPTH*TTPLHSYTRRPIPSXCQNPDE 211
R ++ P Q G+ L G SRPR + +L P L +P P P
Sbjct: 98 RRAFLAPCQYGQPR----RSLLGQPSRPR-RSLLRPRQ-PQRLVEAPEQPGPL---TPSL 148
Query: 212 VG-GLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWT 388
+G G PR QP P+ QP P R + G E +R +GP + C+ P +P
Sbjct: 149 LGPGRPRQQKQP--LMGPE--QPCPPKRPLMGPEQPCQPLRPLMGPNKPCKPQPLLPIPD 204
Query: 389 RTSLPGRDAIHRRPV 433
R SL G+ RP+
Sbjct: 205 RPSLLGQPGPPCRPL 219
>AJ251004-1|CAB61345.1| 1873|Homo sapiens integrin beta 4 protein.
Length = 1873
Score = 33.9 bits (74), Expect = 0.66
Identities = 24/72 (33%), Positives = 34/72 (47%)
Frame = +1
Query: 52 RAKGARGVCETQRSAWCCEQTAGPRYFRAHPLNDSSALLHPTSDPLXLSEPG*GRGATAV 231
R +GAR T RS W R++ A P + + PT+ P ++ P G TA+
Sbjct: 641 RRRGARVRNATSRSRWWTSLREARRWWCAAP-SGTRMTTAPTATPWKVTAP---LGPTAL 696
Query: 232 NTTTRRRGSPQG 267
+ TRRR P G
Sbjct: 697 SWCTRRRDCPPG 708
>AC006011-2|AAX82033.1| 1336|Homo sapiens unknown protein.
Length = 1336
Score = 33.5 bits (73), Expect = 0.87
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -1
Query: 409 PTRQAGSGPAGYSGTPAAPSGRPDGLP 329
P Q G GP G+ G P P G P GLP
Sbjct: 641 PLHQGGGGPQGFMG-PQGPQGPPQGLP 666
>AB044749-1|BAB32435.1| 1336|Homo sapiens WDC146 protein.
Length = 1336
Score = 33.5 bits (73), Expect = 0.87
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -1
Query: 409 PTRQAGSGPAGYSGTPAAPSGRPDGLP 329
P Q G GP G+ G P P G P GLP
Sbjct: 641 PLHQGGGGPQGFMG-PQGPQGPPQGLP 666
>AK096721-1|BAC04850.1| 180|Homo sapiens protein ( Homo sapiens
cDNA FLJ39402 fis, clone PLACE6011975. ).
Length = 180
Score = 32.7 bits (71), Expect = 1.5
Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +2
Query: 215 GGLPRSTLQPDGAAHPKDAQPTEPSRRIEGSETSAVSV-RQPVGPPRRCRWCPG 373
GG P L G HP +P EP R E + + SV P GP R R C G
Sbjct: 91 GGAPALLLPRPGCRHPHPPRP-EPRLRAEPGKVTGASVPAPPSGPLPRLRPCCG 143
>AL162741-4|CAI23246.1| 255|Homo sapiens tumor necrosis factor
receptor superfamily, member 18 protein.
Length = 255
Score = 32.3 bits (70), Expect = 2.0
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 242 PDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPR 382
P+ A+ P+ + ++ RR G ET +P GPP PG P+
Sbjct: 145 PEAASSPRKSGASDRQRRRGGWETCGCEPGRPPGPPTAASPSPGAPQ 191
>AF241229-1|AAF63506.1| 255|Homo sapiens GITR-D protein.
Length = 255
Score = 32.3 bits (70), Expect = 2.0
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 242 PDGAAHPKDAQPTEPSRRIEGSETSAVSVRQPVGPPRRCRWCPGIPR 382
P+ A+ P+ + ++ RR G ET +P GPP PG P+
Sbjct: 145 PEAASSPRKSGASDRQRRRGGWETCGCEPGRPPGPPTAASPSPGAPQ 191
>M33518-1|AAA35586.1| 2142|Homo sapiens protein ( Human
HLA-B-associated transcript 2 (BAT2) gene, 3' end. ).
Length = 2142
Score = 31.9 bits (69), Expect = 2.7
Identities = 25/92 (27%), Positives = 31/92 (33%), Gaps = 2/92 (2%)
Frame = +2
Query: 158 LHSYTRRPIPSXCQNPDEVGGLPRSTLQPDGAAHP--KDAQPTEPSRRIEGSETSAVSVR 331
LH +P + +GG S P G + PS T V +
Sbjct: 2035 LHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLY 2094
Query: 332 QPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 427
Q PP RW P W RT P R+ RR
Sbjct: 2095 QQASPPDALRWIP--KPWERTGPPPREGPSRR 2124
>M33509-1|AAA35585.1| 2142|Homo sapiens protein ( Human
HLA-B-associated transcript 2 (BAT2) mRNA, complete cds.
).
Length = 2142
Score = 31.9 bits (69), Expect = 2.7
Identities = 25/92 (27%), Positives = 31/92 (33%), Gaps = 2/92 (2%)
Frame = +2
Query: 158 LHSYTRRPIPSXCQNPDEVGGLPRSTLQPDGAAHP--KDAQPTEPSRRIEGSETSAVSVR 331
LH +P + +GG S P G + PS T V +
Sbjct: 2035 LHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLY 2094
Query: 332 QPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 427
Q PP RW P W RT P R+ RR
Sbjct: 2095 QQASPPDALRWIP--KPWERTGPPPREGPSRR 2124
>BX511262-1|CAI95572.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 31.9 bits (69), Expect = 2.7
Identities = 25/92 (27%), Positives = 31/92 (33%), Gaps = 2/92 (2%)
Frame = +2
Query: 158 LHSYTRRPIPSXCQNPDEVGGLPRSTLQPDGAAHP--KDAQPTEPSRRIEGSETSAVSVR 331
LH +P + +GG S P G + PS T V +
Sbjct: 2050 LHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLY 2109
Query: 332 QPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 427
Q PP RW P W RT P R+ RR
Sbjct: 2110 QQASPPDALRWIP--KPWERTGPPPREGPSRR 2139
>BC060668-1|AAH60668.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 31.9 bits (69), Expect = 2.7
Identities = 25/92 (27%), Positives = 31/92 (33%), Gaps = 2/92 (2%)
Frame = +2
Query: 158 LHSYTRRPIPSXCQNPDEVGGLPRSTLQPDGAAHP--KDAQPTEPSRRIEGSETSAVSVR 331
LH +P + +GG S P G + PS T V +
Sbjct: 2050 LHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLY 2109
Query: 332 QPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 427
Q PP RW P W RT P R+ RR
Sbjct: 2110 QQASPPDALRWIP--KPWERTGPPPREGPSRR 2139
>BC042295-1|AAH42295.1| 2157|Homo sapiens BAT2 protein protein.
Length = 2157
Score = 31.9 bits (69), Expect = 2.7
Identities = 25/92 (27%), Positives = 31/92 (33%), Gaps = 2/92 (2%)
Frame = +2
Query: 158 LHSYTRRPIPSXCQNPDEVGGLPRSTLQPDGAAHP--KDAQPTEPSRRIEGSETSAVSVR 331
LH +P + +GG S P G + PS T V +
Sbjct: 2050 LHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLY 2109
Query: 332 QPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 427
Q PP RW P W RT P R+ RR
Sbjct: 2110 QQASPPDALRWIP--KPWERTGPPPREGPSRR 2139
>BC030127-1|AAH30127.1| 696|Homo sapiens Similar to HLA-B
associated transcript 2 protein.
Length = 696
Score = 31.9 bits (69), Expect = 2.7
Identities = 25/92 (27%), Positives = 31/92 (33%), Gaps = 2/92 (2%)
Frame = +2
Query: 158 LHSYTRRPIPSXCQNPDEVGGLPRSTLQPDGAAHP--KDAQPTEPSRRIEGSETSAVSVR 331
LH +P + +GG S P G + PS T V +
Sbjct: 589 LHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLY 648
Query: 332 QPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 427
Q PP RW P W RT P R+ RR
Sbjct: 649 QQASPPDALRWIP--KPWERTGPPPREGPSRR 678
>BA000025-31|BAB63391.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 31.9 bits (69), Expect = 2.7
Identities = 25/92 (27%), Positives = 31/92 (33%), Gaps = 2/92 (2%)
Frame = +2
Query: 158 LHSYTRRPIPSXCQNPDEVGGLPRSTLQPDGAAHP--KDAQPTEPSRRIEGSETSAVSVR 331
LH +P + +GG S P G + PS T V +
Sbjct: 2050 LHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLY 2109
Query: 332 QPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 427
Q PP RW P W RT P R+ RR
Sbjct: 2110 QQASPPDALRWIP--KPWERTGPPPREGPSRR 2139
>AL805934-4|CAI18500.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 31.9 bits (69), Expect = 2.7
Identities = 25/92 (27%), Positives = 31/92 (33%), Gaps = 2/92 (2%)
Frame = +2
Query: 158 LHSYTRRPIPSXCQNPDEVGGLPRSTLQPDGAAHP--KDAQPTEPSRRIEGSETSAVSVR 331
LH +P + +GG S P G + PS T V +
Sbjct: 2050 LHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLY 2109
Query: 332 QPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 427
Q PP RW P W RT P R+ RR
Sbjct: 2110 QQASPPDALRWIP--KPWERTGPPPREGPSRR 2139
>AL662847-63|CAI17698.2| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 31.9 bits (69), Expect = 2.7
Identities = 25/92 (27%), Positives = 31/92 (33%), Gaps = 2/92 (2%)
Frame = +2
Query: 158 LHSYTRRPIPSXCQNPDEVGGLPRSTLQPDGAAHP--KDAQPTEPSRRIEGSETSAVSVR 331
LH +P + +GG S P G + PS T V +
Sbjct: 2050 LHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLY 2109
Query: 332 QPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 427
Q PP RW P W RT P R+ RR
Sbjct: 2110 QQASPPDALRWIP--KPWERTGPPPREGPSRR 2139
>AL662801-47|CAI18313.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 31.9 bits (69), Expect = 2.7
Identities = 25/92 (27%), Positives = 31/92 (33%), Gaps = 2/92 (2%)
Frame = +2
Query: 158 LHSYTRRPIPSXCQNPDEVGGLPRSTLQPDGAAHP--KDAQPTEPSRRIEGSETSAVSVR 331
LH +P + +GG S P G + PS T V +
Sbjct: 2050 LHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLY 2109
Query: 332 QPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 427
Q PP RW P W RT P R+ RR
Sbjct: 2110 QQASPPDALRWIP--KPWERTGPPPREGPSRR 2139
>AB210034-1|BAE06116.1| 1537|Homo sapiens C6orf21 variant protein
protein.
Length = 1537
Score = 31.9 bits (69), Expect = 2.7
Identities = 25/92 (27%), Positives = 31/92 (33%), Gaps = 2/92 (2%)
Frame = +2
Query: 158 LHSYTRRPIPSXCQNPDEVGGLPRSTLQPDGAAHP--KDAQPTEPSRRIEGSETSAVSVR 331
LH +P + +GG S P G + PS T V +
Sbjct: 1430 LHPVELKPFQDYQKLSSNLGGPGSSRTPPTGRSFSGLNSRLKATPSTYSGVFRTQRVDLY 1489
Query: 332 QPVGPPRRCRWCPGIPRWTRTSLPGRDAIHRR 427
Q PP RW P W RT P R+ RR
Sbjct: 1490 QQASPPDALRWIP--KPWERTGPPPREGPSRR 1519
>X52486-1|CAA36728.1| 326|Homo sapiens protein ( Human mRNA for
uracil-DNA glycosylase. ).
Length = 326
Score = 31.5 bits (68), Expect = 3.5
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 650 FLXKWWDSPKVXHXLSRXPSLPXHCXPXXPATKRPS 757
FL W++P+ L P LP H P PA+ PS
Sbjct: 52 FLPLSWEAPRFFLALPSLPQLPLHPKPSGPASPPPS 87
>M87499-1|AAB05817.1| 324|Homo sapiens uracil-DNA glycosylase
protein.
Length = 324
Score = 31.5 bits (68), Expect = 3.5
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 650 FLXKWWDSPKVXHXLSRXPSLPXHCXPXXPATKRPS 757
FL W++P+ L P LP H P PA+ PS
Sbjct: 52 FLPLSWEAPRFFLALPSLPQLPLHPKPSGPASPPPS 87
>BC030225-1|AAH30225.1| 134|Homo sapiens SNX22 protein protein.
Length = 134
Score = 30.7 bits (66), Expect = 6.1
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +2
Query: 290 RRIEGSETSAVSVRQPVGPPRRCRWCPGIPRWTRTSL 400
R +EG + S VRQPV P R R PG PR + +L
Sbjct: 96 RALEGPQGSEGQVRQPVLPGVRERRVPGQPRRRKAAL 132
>BC028012-1|AAH28012.1| 670|Homo sapiens PML-RARA regulated adaptor
molecule 1 protein.
Length = 670
Score = 30.7 bits (66), Expect = 6.1
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 209 EVGGLPRSTLQPDGAAHP-KDAQPTE--PSRRIEGSETSAVSVRQP 337
E+GGLPR++ +P+ + P K QP P R+ E SAV R P
Sbjct: 325 ELGGLPRTSSEPEFNSLPRKLLQPERRGPPRKFSQPEPSAVLKRHP 370
>AJ272324-1|CAC17767.1| 718|Homo sapiens adaptor molecule-1
protein.
Length = 718
Score = 30.7 bits (66), Expect = 6.1
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 209 EVGGLPRSTLQPDGAAHP-KDAQPTE--PSRRIEGSETSAVSVRQP 337
E+GGLPR++ +P+ + P K QP P R+ E SAV R P
Sbjct: 373 ELGGLPRTSSEPEFNSLPRKLLQPERRGPPRKFSQPEPSAVLKRHP 418
>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
proteoglycan core protein protein.
Length = 2316
Score = 26.6 bits (56), Expect(2) = 7.0
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 424 TVYRVPTRQ-AGSGPAGYSGTPAAPSGRPD 338
+V + PT Q AG GP+G A SG PD
Sbjct: 1829 SVTQAPTAQEAGEGPSGILELSGAHSGAPD 1858
Score = 22.2 bits (45), Expect(2) = 7.0
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 355 PSGRPDGLPYRDG 317
PSG P G PY G
Sbjct: 1879 PSGEPPGTPYFSG 1891
>X17406-1|CAA35463.1| 600|Homo sapiens cartilage specific
proteoglycan (600 AA) protein.
Length = 600
Score = 26.6 bits (56), Expect(2) = 7.7
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -1
Query: 424 TVYRVPTRQ-AGSGPAGYSGTPAAPSGRPD 338
+V + PT Q AG GP+G A SG PD
Sbjct: 52 SVTQAPTAQEAGEGPSGILELSGAHSGAPD 81
Score = 22.2 bits (45), Expect(2) = 7.7
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 355 PSGRPDGLPYRDG 317
PSG P G PY G
Sbjct: 102 PSGEPPGTPYFSG 114
>BC110827-1|AAI10828.1| 132|Homo sapiens DENND3 protein protein.
Length = 132
Score = 30.3 bits (65), Expect = 8.1
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = +2
Query: 347 PRRCRWCPGIPRWT--RTSLPGR 409
P RC W PG P T RT+ PGR
Sbjct: 106 PSRCAWSPGFPITTPSRTAFPGR 128
>BC068551-1|AAH68551.1| 582|Homo sapiens LYN protein protein.
Length = 582
Score = 30.3 bits (65), Expect = 8.1
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 242 PDGAAHPKDAQP--TEPSRRIEGSETSAVSVRQPVGPPRR 355
P A P+ +P + PS R++ S +A P GPPRR
Sbjct: 29 PRQAGRPRHPRPRASSPSPRVQRSRPAASPYAGPAGPPRR 68
>BC059394-1|AAH59394.1| 582|Homo sapiens LYN protein protein.
Length = 582
Score = 30.3 bits (65), Expect = 8.1
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 242 PDGAAHPKDAQP--TEPSRRIEGSETSAVSVRQPVGPPRR 355
P A P+ +P + PS R++ S +A P GPPRR
Sbjct: 29 PRQAGRPRHPRPRASSPSPRVQRSRPAASPYAGPAGPPRR 68
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,900,254
Number of Sequences: 237096
Number of extensions: 2873539
Number of successful extensions: 11097
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 8903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11029
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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