Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_J05
         (757 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171...   127   1e-29
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160...   125   4e-29
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164...   125   4e-29
03_02_0966 + 12783515-12783901                                         30   2.3  
08_01_0532 - 4611650-4612706,4613405-4613757                           29   4.0  
01_05_0291 - 20515206-20516262,20516961-20517313                       29   4.0  

>08_01_0215 -
           1714224-1714364,1714795-1715187,1715279-1715377,
           1716248-1716316,1716408-1716665
          Length = 319

 Score =  127 bits (306), Expect = 1e-29
 Identities = 79/205 (38%), Positives = 100/205 (48%)
 Frame = -2

Query: 744 GAIAPXGQWSFPPTNTGLGSXGDXFXXGSXYPYQXFKGYYGNHQXCTHLGSPVNKVGASE 565
           G +AP      PP NTGL      F      P +  KG          L    +KVG+SE
Sbjct: 117 GLVAPVDV-VVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITP-VELIKKGDKVGSSE 174

Query: 564 ATLXNMLNISPFSYGLVVKQVYDSGTIFAPEIXDIKPGDLRAKFQAGVANVAALSLAIGY 385
           + L   L I PFSYGLV+  VYDSG++F+PE+ D+   DL  KF +GV+ VA++SLAI Y
Sbjct: 175 SALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISY 234

Query: 384 PTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXXXXXXXXXXXXXX 205
           PTIA+APH   NG+KN+L               IKE++KDPSKF                
Sbjct: 235 PTIAAAPHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKFAVAAPVAADSGAAAPS 294

Query: 204 XXXXXXXXXXXXXXSDDDMGFGLFD 130
                         SD D+G  LFD
Sbjct: 295 AAKEEEKKEEPEEESDGDLGMSLFD 319


>12_01_0211 -
           1601129-1601272,1601670-1602062,1602142-1602240,
           1602920-1602988,1603071-1603328
          Length = 320

 Score =  125 bits (301), Expect = 4e-29
 Identities = 72/164 (43%), Positives = 92/164 (56%)
 Frame = -2

Query: 744 GAIAPXGQWSFPPTNTGLGSXGDXFXXGSXYPYQXFKGYYGNHQXCTHLGSPVNKVGASE 565
           G +AP      PP NTGL      F      P +  KG          L    +KVG+SE
Sbjct: 117 GLVAPVDV-VVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITP-VELIKKGDKVGSSE 174

Query: 564 ATLXNMLNISPFSYGLVVKQVYDSGTIFAPEIXDIKPGDLRAKFQAGVANVAALSLAIGY 385
           + L   L I PFSYGLV+  VYDSG++F+PE+ D+   DL  KF +GV+ VA++SLAI Y
Sbjct: 175 SALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTEEDLMEKFASGVSMVASVSLAISY 234

Query: 384 PTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 253
           PTIA+APH   NG+KN+L               IKE++KDPSKF
Sbjct: 235 PTIAAAPHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKF 278


>11_01_0210 -
           1647922-1648065,1648459-1648851,1648930-1649028,
           1649706-1649774,1649877-1650134
          Length = 320

 Score =  125 bits (301), Expect = 4e-29
 Identities = 72/164 (43%), Positives = 92/164 (56%)
 Frame = -2

Query: 744 GAIAPXGQWSFPPTNTGLGSXGDXFXXGSXYPYQXFKGYYGNHQXCTHLGSPVNKVGASE 565
           G +AP      PP NTGL      F      P +  KG          L    +KVG+SE
Sbjct: 117 GLVAPVDV-VVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITP-VELIKKGDKVGSSE 174

Query: 564 ATLXNMLNISPFSYGLVVKQVYDSGTIFAPEIXDIKPGDLRAKFQAGVANVAALSLAIGY 385
           + L   L I PFSYGLV+  VYDSG++F+PE+ D+   DL  KF +GV+ VA++SLAI Y
Sbjct: 175 SALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTEEDLMEKFASGVSMVASVSLAISY 234

Query: 384 PTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKF 253
           PTIA+APH   NG+KN+L               IKE++KDPSKF
Sbjct: 235 PTIAAAPHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKF 278


>03_02_0966 + 12783515-12783901
          Length = 128

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -2

Query: 429 AGVANVAALSLAIGYPTIASAPHSIANGFKNLL 331
           AG+A VAA++ A+  P +A A  +++   KN L
Sbjct: 67  AGIAAVAAVAAALAVPEVAEAAPALSPSLKNFL 99


>08_01_0532 - 4611650-4612706,4613405-4613757
          Length = 469

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
 Frame = -2

Query: 714 FPPTNTGL-GSXGDXFXXGSX----YPYQXFKGYYGNHQXCTHL-GSPVNKVGAS 568
           FP ++  L  S GD    GS     +P   F  Y+GNH   +HL G+P+    AS
Sbjct: 98  FPSSSAWLDASGGDESSPGSCDKDVHPRGGFMSYFGNHAQNSHLVGAPIYIADAS 152


>01_05_0291 - 20515206-20516262,20516961-20517313
          Length = 469

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
 Frame = -2

Query: 714 FPPTNTGL-GSXGDXFXXGSX----YPYQXFKGYYGNHQXCTHL-GSPVNKVGAS 568
           FP ++  L  S GD    GS     +P   F  Y+GNH   +HL G+P+    AS
Sbjct: 98  FPSSSAWLDASGGDESSPGSWDKDVHPRGGFMSYFGNHAQNSHLVGAPIYIADAS 152


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,020,736
Number of Sequences: 37544
Number of extensions: 335608
Number of successful extensions: 783
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)