Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_J05
         (757 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   145   3e-35
Z96100-7|CAB09531.1|  824|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z79698-2|CAB01976.1|  824|Caenorhabditis elegans Hypothetical pr...    28   6.2  
Z79698-1|CAL44963.1|  758|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U61945-5|AAB03128.1|  517|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  145 bits (351), Expect = 3e-35
 Identities = 86/205 (41%), Positives = 108/205 (52%)
 Frame = -2

Query: 744 GAIAPXGQWSFPPTNTGLGSXGDXFXXGSXYPYQXFKGYYGNHQXCTHLGSPVNKVGASE 565
           GAIAP      PP NTG+G     F      P +  +G         HL    +KVGASE
Sbjct: 114 GAIAPCDV-KLPPQNTGMGPEKTSFFQALQIPTKIARGTIEILND-VHLIKEGDKVGASE 171

Query: 564 ATLXNMLNISPFSYGLVVKQVYDSGTIFAPEIXDIKPGDLRAKFQAGVANVAALSLAIGY 385
           + L NML ++PFSYGLVV+QVYD GT++ PE+ D+   +LR +F +GV NVA++SLA+ Y
Sbjct: 172 SALLNMLGVTPFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNY 231

Query: 384 PTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXXXXXXXXXXXXXX 205
           PT+AS  HS+ANG +N+L               IK FI DPSKF                
Sbjct: 232 PTLASVAHSLANGLQNMLGVAAVTDVSFKEAETIKAFIADPSKF----AAAAPAAAAAPA 287

Query: 204 XXXXXXXXXXXXXXSDDDMGFGLFD 130
                         SDDDMGFGLFD
Sbjct: 288 AAAPAAKKEEPKEESDDDMGFGLFD 312


>Z96100-7|CAB09531.1|  824|Caenorhabditis elegans Hypothetical
           protein H15N14.2a protein.
          Length = 824

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = -2

Query: 576 GASEATLXNMLNISPFSYGLVVKQVYDSGTIFAPEIXDIKPGDLRAKFQAGVANVAALSL 397
           G S+ +L   L+     +G  V ++ D G++ A  + + +    R    AG A     SL
Sbjct: 570 GRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTSL 629

Query: 396 A 394
           A
Sbjct: 630 A 630


>Z79698-2|CAB01976.1|  824|Caenorhabditis elegans Hypothetical
           protein H15N14.2a protein.
          Length = 824

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = -2

Query: 576 GASEATLXNMLNISPFSYGLVVKQVYDSGTIFAPEIXDIKPGDLRAKFQAGVANVAALSL 397
           G S+ +L   L+     +G  V ++ D G++ A  + + +    R    AG A     SL
Sbjct: 570 GRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTSL 629

Query: 396 A 394
           A
Sbjct: 630 A 630


>Z79698-1|CAL44963.1|  758|Caenorhabditis elegans Hypothetical
           protein H15N14.2b protein.
          Length = 758

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = -2

Query: 576 GASEATLXNMLNISPFSYGLVVKQVYDSGTIFAPEIXDIKPGDLRAKFQAGVANVAALSL 397
           G S+ +L   L+     +G  V ++ D G++ A  + + +    R    AG A     SL
Sbjct: 504 GRSDESLNRFLSRGMIVWGPEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTSL 563

Query: 396 A 394
           A
Sbjct: 564 A 564


>U61945-5|AAB03128.1|  517|Caenorhabditis elegans Hypothetical
           protein C49C8.1 protein.
          Length = 517

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -3

Query: 503 YMILELFLHLKXWTSNQEISVPSSK 429
           YM+ E F+ L  WTSN+EI++   K
Sbjct: 302 YMVAEFFVELP-WTSNEEIALEELK 325


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,300,256
Number of Sequences: 27780
Number of extensions: 260807
Number of successful extensions: 580
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 577
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)