Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_J05
         (757 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    25   1.0  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    25   1.0  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   7.1  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   9.4  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 540 ISPFSYGLVVKQVYDSGTIFAP 475
           ISP + GLV + +  SGT+ AP
Sbjct: 264 ISPVTRGLVRRGILQSGTLNAP 285


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 540 ISPFSYGLVVKQVYDSGTIFAP 475
           ISP + GLV + +  SGT+ AP
Sbjct: 264 ISPVTRGLVRRGILQSGTLNAP 285


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 618 HQXCTHLGSPVNKVG 574
           H+ CT +GS +  VG
Sbjct: 193 HRVCTQIGSSMKSVG 207


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 11/46 (23%), Positives = 17/46 (36%)
 Frame = -3

Query: 725 GSGHSRPQTPGLGPXETXXXQALXIXTKXSKGTMEIIXDVHILEAR 588
           G G + P +P L    T       +  K  K  +    D+H  + R
Sbjct: 20  GGGSTTPASPTLSTPPTLNLMEQILLAKIEKQNLHESDDLHESDGR 65


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,751
Number of Sequences: 438
Number of extensions: 3346
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)