Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_J01
         (740 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0435 + 3428552-3428636,3429242-3429352,3429434-3429738,342...   210   7e-55
11_01_0427 + 3274817-3274901,3275587-3275697,3275979-3276283,327...   210   7e-55
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    30   1.7  
03_05_1096 - 30364144-30365310,30365825-30365971,30366087-303663...    29   5.1  
04_01_0376 - 4929447-4929731                                           28   9.0  

>12_01_0435 +
           3428552-3428636,3429242-3429352,3429434-3429738,
           3429821-3430230,3430323-3430556,3430934-3431378,
           3432300-3432390,3433292-3433518,3433786-3433861,
           3434009-3434134,3434221-3434384
          Length = 757

 Score =  210 bits (514), Expect = 7e-55
 Identities = 98/143 (68%), Positives = 114/143 (79%)
 Frame = -3

Query: 582 KVPRKTHKGXRKVACIGAXHPXRVSFXVARAGQKGYHHRTEMNXKIYRIGQGIHKKDGKV 403
           ++PRKTH+G RKVACIGA HP RVS+ VARAGQ GYHHRTEMN K+Y+IG     K G+ 
Sbjct: 240 RLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQE 294

Query: 402 IKNNASTEYDLXEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRA 223
             + A TE+D  EK ITPMGGFPHYG V  D++MIKGCC+GPKKR++TLR+SL   T R 
Sbjct: 295 -SHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRL 353

Query: 222 ALEKINLKFIDTSSKFGHGRFQT 154
           ALE+I LKFIDTSSKFGHGRFQT
Sbjct: 354 ALEEIKLKFIDTSSKFGHGRFQT 376


>11_01_0427 +
           3274817-3274901,3275587-3275697,3275979-3276283,
           3276406-3276815,3276942-3277200
          Length = 389

 Score =  210 bits (514), Expect = 7e-55
 Identities = 98/143 (68%), Positives = 114/143 (79%)
 Frame = -3

Query: 582 KVPRKTHKGXRKVACIGAXHPXRVSFXVARAGQKGYHHRTEMNXKIYRIGQGIHKKDGKV 403
           ++PRKTH+G RKVACIGA HP RVS+ VARAGQ GYHHRTEMN K+Y+IG     K G+ 
Sbjct: 240 RLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKIG-----KSGQE 294

Query: 402 IKNNASTEYDLXEKSITPMGGFPHYGEVNNDFVMIKGCCMGPKKRIITLRKSLRVHTKRA 223
             + A TE+D  EK ITPMGGFPHYG V  D++MIKGCC+GPKKR++TLR+SL   T R 
Sbjct: 295 -SHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKRVVTLRQSLLKQTSRL 353

Query: 222 ALEKINLKFIDTSSKFGHGRFQT 154
           ALE+I LKFIDTSSKFGHGRFQT
Sbjct: 354 ALEEIKLKFIDTSSKFGHGRFQT 376


>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = +3

Query: 3   FFFFFFALSNVYFHGRHLRLRSSRWGCGSRSFFANTILLEC 125
           FFFFFF   +VY   RH R R  R     R  F ++    C
Sbjct: 102 FFFFFFFSGDVYCGHRHFRRRRRRRQWDGRLVFGSSGASAC 142


>03_05_1096 - 30364144-30365310,30365825-30365971,30366087-30366393,
            30366541-30366849,30367544-30370567,30370640-30372290,
            30372373-30373463,30373544-30373646,30373737-30374439,
            30374654-30375783,30375913-30376027,30376504-30376695,
            30377443-30377616,30378438-30378494,30378581-30378716,
            30378842-30378927,30379023-30379092,30379993-30380021,
            30380444-30380456,30380762-30381006
          Length = 3582

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -3

Query: 375  DLXEKSITPMGGFPHYGEVNNDFVMIKGCCMG 280
            D    + +P+GG P YG ++ D  +   C +G
Sbjct: 1371 DPTSAAASPIGGIPRYGRLSGDVYVCNQCTIG 1402


>04_01_0376 - 4929447-4929731
          Length = 94

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -3

Query: 186 SSKFGHGRFQTPAXQGCIHGYTQEGSYSRRSCGYHNPSGCCAA 58
           +++ G G   +   +G +HG+   G+ + RSC      G C+A
Sbjct: 34  AARSGGGVHASAVRRGAVHGHAWCGARAERSCAAWLQQGRCSA 76


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,797,107
Number of Sequences: 37544
Number of extensions: 401464
Number of successful extensions: 741
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)