Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_I20
(821 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 40 6e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.002
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.016
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 34 0.028
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.086
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.20
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.60
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.1
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 3.2
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 26 7.4
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 39.5 bits (88), Expect = 6e-04
Identities = 18/51 (35%), Positives = 19/51 (37%)
Frame = +1
Query: 463 IQTPXXSPPPXXPXXPXXXXLPPXPGXXPRPPXVXPXPXXPPXRPPXXXPA 615
+ TP P P PP P P PP P P PP PP PA
Sbjct: 1687 VSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPA 1737
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = +3
Query: 483 PPPXSPXXPXXXASPPXSXGPPPXXXGXSPXXPPPXXP 596
PPP P ++PP GPP P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 25.4 bits (53), Expect = 9.8
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +1
Query: 466 QTPXXSPPPXXPXXPXXXXLPPXPGXXPRPPXVXPXPXXPPXRPPXXXPAXXXA 627
Q +PPP P PP P PP P P P P A
Sbjct: 1701 QMSAPTPPPPPMSVPPPPSAPPMPAG---PPSAPPPPLPASSAPSVPNPGDRSA 1751
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.9 bits (84), Expect = 0.002
Identities = 35/145 (24%), Positives = 36/145 (24%), Gaps = 4/145 (2%)
Frame = +2
Query: 398 SPXXPPXXXLSAXPPXXPXPXXFKXPXXAPPXVXXXXPXXXXSPXXXGXXPXXXRXXPXR 577
S PP SA P P P P P +P P P
Sbjct: 1018 SSKAPPVPLPSADAPPIPVPST-APPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSI 1076
Query: 578 PXPXXAXPXXXPXXFXPXPPPLXLIP----XXAXTPPAXXXXXPXPXXXXSPLXXXXXXP 745
P P A P P P P P P PP P S P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 746 XANPPTXXPXXCLXXPRXXPSXXPP 820
PP P P PS PP
Sbjct: 1137 SGAPPVPKPSVA-APPVPAPSGAPP 1160
Score = 30.3 bits (65), Expect = 0.35
Identities = 18/68 (26%), Positives = 22/68 (32%), Gaps = 1/68 (1%)
Frame = +1
Query: 412 PXRXAXXXSXXLPXXXXIQTPXXSPPPXXPXXPXXXX-LPPXPGXXPRPPXVXPXPXXPP 588
P A + +P P +P P P +PP P PP P PP
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 589 XRPPXXXP 612
PP P
Sbjct: 1210 VPPPSTAP 1217
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +1
Query: 472 PXXSPPPXXPXXPXXXXLPPXPGXXPRPPXVXPXPXXPPXRPP 600
P +P P P PP P PP P PP P
Sbjct: 1065 PVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKP 1107
Score = 27.1 bits (57), Expect = 3.2
Identities = 20/85 (23%), Positives = 22/85 (25%)
Frame = +3
Query: 387 AKXPRPXXPPPXXXXRLXXAXXXXXHSNXXXEPPPXSPXXPXXXASPPXSXGPPPXXXGX 566
A PRP PP S + PP +P SP P
Sbjct: 958 ASGPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKL 1017
Query: 567 SPXXPPPXXPXXXXPRXXSGRXPPP 641
S PP P P PP
Sbjct: 1018 SSKAPPVPLPSADAPPIPVPSTAPP 1042
Score = 27.1 bits (57), Expect = 3.2
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Frame = +3
Query: 483 PPPXSPXXPXXXASPPXSXGPP--PXXXGXSPXXPPPXXPXXXXPRXXSGRXPPPS 644
PP P P S PP G P PP P P PPPS
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPS 1214
Score = 26.6 bits (56), Expect = 4.3
Identities = 14/44 (31%), Positives = 15/44 (34%), Gaps = 1/44 (2%)
Frame = +1
Query: 472 PXXSPPPXXPXXPXXXX-LPPXPGXXPRPPXVXPXPXXPPXRPP 600
P PP P P +PP P PP P PP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 25.8 bits (54), Expect = 7.4
Identities = 22/83 (26%), Positives = 25/83 (30%), Gaps = 1/83 (1%)
Frame = +3
Query: 396 PRPXXPPPXXXXRLXXAXXXXXHSNXXXEPPPXSPXXPXXXASPPXSXGPP-PXXXGXSP 572
P P PP + S P P + P PP S PP P P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPV----PPPSEAPPVPKPSVGVP 1208
Query: 573 XXPPPXXPXXXXPRXXSGRXPPP 641
PPP P +G P P
Sbjct: 1209 PVPPP-STAPPVPTPSAGLPPVP 1230
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = +1
Query: 472 PXXSPPPXXPXXPXXXXLPPXPGXXPRPPXVXPXPXXPPXRPP 600
P P P P PP P P V P PP P
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 25.4 bits (53), Expect = 9.8
Identities = 28/140 (20%), Positives = 32/140 (22%)
Frame = +2
Query: 401 PXXPPXXXLSAXPPXXPXPXXFKXPXXAPPXVXXXXPXXXXSPXXXGXXPXXXRXXPXRP 580
P P + P P K APP P P P
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Query: 581 XPXXAXPXXXPXXFXPXPPPLXLIPXXAXTPPAXXXXXPXPXXXXSPLXXXXXXPXANPP 760
P A P P P PP+ P P P+ P PP
Sbjct: 1163 KPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPV----PPPSTAPP 1218
Query: 761 TXXPXXCLXXPRXXPSXXPP 820
P L + PP
Sbjct: 1219 VPTPSAGLPPVPVPTAKAPP 1238
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 34.7 bits (76), Expect = 0.016
Identities = 29/82 (35%), Positives = 30/82 (36%), Gaps = 2/82 (2%)
Frame = -2
Query: 721 GGXGXXWXGXXXGPG-WGGXGXXRDQXEGGGXRPEXXRGXXXXGXXGGGXXGXXPXXXGG 545
GG G G GPG +GG G G G G G GG G P GG
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFG-------GFGGEGHHHGGHGGFGGGPGGFEGG-PGGFGG 242
Query: 544 GP-XXXGGXAXXXGXXGDXGGG 482
GP GG G G GGG
Sbjct: 243 GPGGFGGGLGGFGGGPGGFGGG 264
Score = 32.3 bits (70), Expect = 0.086
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -1
Query: 611 GXXXGGRXGGXXGXGXTXGGRGXXPGXGGRXXXXGXXGXXGGG 483
G GG GG G GG G G GG G G GGG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGG 229
Score = 29.9 bits (64), Expect = 0.46
Identities = 24/70 (34%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Frame = -2
Query: 685 GPGWGGXGXXRDQXEGGGXRPEXXRGXXXXGXXGG-GXXGXXPXXXGGGP-XXXGGXAXX 512
G G+GG G G G P G G GG G GGGP GG
Sbjct: 187 GGGFGGFGG------GSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGF 240
Query: 511 XGXXGDXGGG 482
G G GGG
Sbjct: 241 GGGPGGFGGG 250
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.9 bits (74), Expect = 0.028
Identities = 19/42 (45%), Positives = 19/42 (45%)
Frame = -1
Query: 611 GXXXGGRXGGXXGXGXTXGGRGXXPGXGGRXXXXGXXGXXGG 486
G GGR G G G GGRG G GGR G G GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARG-GGRGGARGGRGGRGG 52
Score = 31.9 bits (69), Expect = 0.11
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 599 GGRXGGXXGXGXTXGGRGXXPGXGGRXXXXGXXGXXGG 486
GGR G G G GGRG G G G G GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGG 46
Score = 30.7 bits (66), Expect = 0.26
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = -1
Query: 611 GXXXGGRXGGXXGXGXTXGGR--GXXPGXGGRXXXXGXXGXXGGG 483
G GGR G G G GG G G GGR G G GG
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 599 GGRXGGXXGXGXTXGGRGXXPG 534
GGR G G G + GGRG G
Sbjct: 48 GGRGGARGGRGGSSGGRGGAKG 69
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.086
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 483 PPPXSPXXPXXXASPPXSXGPPPXXXGXSPXXPPPXXP 596
P P P P PP PPP G P PPP P
Sbjct: 748 PIPVPPPAPIMGGPPPPP--PPPGVAGAGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.60
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +3
Query: 483 PPPXSPXXPXXXASPPXSXGPPPXXXGXSPXXPPPXXPXXXXPRXXSGRXPPP 641
PPP P +P PPP P PPP P +G PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP-------PPGVAGAGPPP 777
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/54 (29%), Positives = 19/54 (35%)
Frame = +3
Query: 483 PPPXSPXXPXXXASPPXSXGPPPXXXGXSPXXPPPXXPXXXXPRXXSGRXPPPS 644
PPP + P +P P P G P PPP P PPP+
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP---PPPPA 784
Score = 25.8 bits (54), Expect = 7.4
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 1/37 (2%)
Frame = +1
Query: 481 SPPPXXPXXPXXXXLP-PXPGXXPRPPXVXPXPXXPP 588
SPPP P P P P P P P P PP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.20
Identities = 19/80 (23%), Positives = 25/80 (31%)
Frame = +3
Query: 402 PXXPPPXXXXRLXXAXXXXXHSNXXXEPPPXSPXXPXXXASPPXSXGPPPXXXGXSPXXP 581
P PPP R A +++ PP +P A P PP +P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 582 PPXXPXXXXPRXXSGRXPPP 641
P P +G P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAP 467
Score = 30.7 bits (66), Expect = 0.26
Identities = 24/85 (28%), Positives = 27/85 (31%)
Frame = +3
Query: 387 AKXPRPXXPPPXXXXRLXXAXXXXXHSNXXXEPPPXSPXXPXXXASPPXSXGPPPXXXGX 566
A RP PPP SN PPP P ++ S PP
Sbjct: 306 ANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPP-----PPPRSNAAGSIPLPPQGRSA 360
Query: 567 SPXXPPPXXPXXXXPRXXSGRXPPP 641
P PP P +GR PPP
Sbjct: 361 PPPPPPRSAP-------STGRQPPP 378
Score = 29.9 bits (64), Expect = 0.46
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Frame = +1
Query: 445 LPXXXXIQTPXXSPPPXXPXXPXXXXLPP-XPGXXPRP---PXVXPXPXXPPXRPPXXXP 612
LP P +PP P LPP P P P P P P P PP P
Sbjct: 423 LPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Query: 613 A 615
A
Sbjct: 483 A 483
Score = 27.5 bits (58), Expect = 2.4
Identities = 20/79 (25%), Positives = 22/79 (27%)
Frame = +2
Query: 437 PPXXPXPXXFKXPXXAPPXVXXXXPXXXXSPXXXGXXPXXXRXXPXRPXPXXAXPXXXPX 616
PP P P APP + P P P P P A P P
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP- 478
Query: 617 XFXPXPPPLXLIPXXAXTP 673
P P P + A P
Sbjct: 479 --APAPAPAAPVASIAELP 495
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.60
Identities = 16/57 (28%), Positives = 21/57 (36%), Gaps = 2/57 (3%)
Frame = +1
Query: 463 IQTPXXSPPPXXPXXPXXXXLPPXPGXXPRPPXVXPXPXXP--PXRPPXXXPAXXXA 627
++ P +PP P PP P P P P P P P + P P+ A
Sbjct: 137 LRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSA 193
Score = 27.9 bits (59), Expect = 1.8
Identities = 18/54 (33%), Positives = 20/54 (37%)
Frame = +3
Query: 483 PPPXSPXXPXXXASPPXSXGPPPXXXGXSPXXPPPXXPXXXXPRXXSGRXPPPS 644
P +P P PP S P P SP PP P P S PPP+
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPP-IPSKAPPIPSS--LPPPA 175
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/40 (30%), Positives = 15/40 (37%)
Frame = +3
Query: 525 PPXSXGPPPXXXGXSPXXPPPXXPXXXXPRXXSGRXPPPS 644
PP + PPP G P PP P + + P S
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTPAQS 44
Score = 25.4 bits (53), Expect = 9.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 523 LPPXPGXXPRPPXVXPXPXXPPXRPP 600
LPP P PP P PP PP
Sbjct: 4 LPPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.1 bits (57), Expect = 3.2
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Frame = -1
Query: 599 GGRXG--GXXGXGXTXGGRGXXPGXGGRXXXXGXXGXXGGGLXXG 471
G R G G G G GGRG G G G G GG G
Sbjct: 129 GARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGG 173
Score = 25.4 bits (53), Expect = 9.8
Identities = 19/68 (27%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
Frame = -2
Query: 664 GXXRDQXEGGGXRPEXXRGXXXXGXXG--GGXXGXXPXXXGGGPXXXGGXAXXXGXXGDX 491
G + + G RG G G GG G GGG G G G
Sbjct: 123 GPKKPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGF 182
Query: 490 GGGSXXXF 467
GGS F
Sbjct: 183 RGGSRGGF 190
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 25.8 bits (54), Expect = 7.4
Identities = 21/73 (28%), Positives = 25/73 (34%), Gaps = 8/73 (10%)
Frame = +1
Query: 403 RQXPXRXAXXXSXXLPXXXXIQTPXXSPP-PXXPXXPXXXXLPPXPG-------XXPRPP 558
+Q + A S +P P S P P P LPP PG +PP
Sbjct: 464 QQPTQQSAVQPSNLVPSQNAPFIPGTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPP 523
Query: 559 XVXPXPXXPPXRP 597
V P PP P
Sbjct: 524 MVPPGMALPPGMP 536
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,525,433
Number of Sequences: 5004
Number of extensions: 19690
Number of successful extensions: 198
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 119
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 402440190
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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