Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_I10
         (777 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.60 
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              24   1.4  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   1.4  
M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee homeobox-...    23   4.2  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    23   4.2  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   7.3  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   7.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   9.7  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 593  GEGSAGVLLDSRXRSTSHRGVPRRXR 670
            G G+ G  LD+  RS+   G+PR  R
Sbjct: 1276 GSGANGSFLDNLIRSSLETGIPRDQR 1301



 Score = 24.2 bits (50), Expect = 1.4
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +3

Query: 216 RPMLYPQQQSRLDSATGSRSAHSPVSLR 299
           +P L PQ     DS++ SRSA SP+S++
Sbjct: 440 QPPLSPQS----DSSSSSRSAESPMSVQ 463


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 340 SCQDWE*SGGCKDSSNLLPC 399
           +C+D   S  CK SS LL C
Sbjct: 102 NCKDITESNSCKKSSKLLQC 121


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 229 YNMGRAWGDLCTPCPPRG 176
           Y  G  +   CTP PPRG
Sbjct: 384 YASGAQFATPCTPSPPRG 401


>M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E60. ).
          Length = 109

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 433 PRTRRCLRSCWRGDAG 480
           PRTRR  RS  RG+ G
Sbjct: 1   PRTRRVKRSDGRGNGG 16


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +3

Query: 204 SPQARPMLYPQQQSRLDSATGSRSAHSPVSLRYA*QLPTRPSI 332
           S  +R  L+P++   ++  +  R   SP +     QLPT  S+
Sbjct: 421 SLDSRDELHPRELEAVNLGSACRIHGSPATTAAPPQLPTEESV 463


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 341 EILY*RASGQLLRVPERD 288
           E  Y R  GQ+L +PE D
Sbjct: 290 EYSYLRLKGQMLYIPESD 307


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 341 EILY*RASGQLLRVPERD 288
           E  Y R  GQ+L +PE D
Sbjct: 290 EYSYLRLKGQMLYIPESD 307


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 160 HLCGGGAIPPNWRRNV 113
           H+CG   IP +W R +
Sbjct: 540 HVCGVKGIPCSWGRAI 555


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,588
Number of Sequences: 438
Number of extensions: 3252
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)