Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_I06
         (887 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0658 - 20366559-20367562,20367745-20367937                       30   2.1  
07_01_0004 + 35300-35533,35617-35732,39044-39287,39451-40578,406...    29   4.9  
03_01_0615 + 4523202-4524518                                           29   4.9  
02_05_0197 - 26641356-26642188,26642312-26642398,26643373-266434...    29   6.5  

>07_03_0658 - 20366559-20367562,20367745-20367937
          Length = 398

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/57 (29%), Positives = 24/57 (42%)
 Frame = +2

Query: 170 VVVGSRHRMRMILRQHGFGHCVEQRPLVPEVPVKRRLLNLXPFRQFACRQTVYADLF 340
           V+ G+ H + M L +HG    V  + L+P        L    FRQ       + DLF
Sbjct: 251 VIPGTEHALNMRLTEHGLDGHVSIKDLIPLAAANADELLSDAFRQLGLAGVEWNDLF 307


>07_01_0004 +
           35300-35533,35617-35732,39044-39287,39451-40578,
           40657-40833
          Length = 632

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -3

Query: 537 YSTSLYKKXGXYRSGIPRALCDIHCAGADSLSLISWW 427
           Y TSL  + G ++ G+PR  C    AG D L     W
Sbjct: 285 YQTSLSPRCGAFKDGVPRMSC-AKIAGRDKLKRRGDW 320


>03_01_0615 + 4523202-4524518
          Length = 438

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 40  GCPSRDTLVAAATCSSSTWCHCA 108
           G PS+  L+A  T + +TW HC+
Sbjct: 86  GSPSQQLLLALDTSADATWAHCS 108


>02_05_0197 - 26641356-26642188,26642312-26642398,26643373-26643452,
            26643948-26644120,26644227-26644308,26644623-26644758,
            26644777-26644833,26644905-26645120,26645939-26646335,
            26646458-26646544,26647063-26647324,26648892-26648972,
            26649176-26650350
          Length = 1221

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 25   WAA*YGCPSRDTLVAAATCSSSTWCHCAGGRR 120
            W A +G P+  TL AA  CSS       G RR
Sbjct: 1091 WPAGHGHPASGTLAAAMACSSRPVARQQGNRR 1122


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,415,137
Number of Sequences: 37544
Number of extensions: 412134
Number of successful extensions: 1011
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)