Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_I05
         (777 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...   206   1e-55
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...   206   1e-55
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    23   2.4  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   9.7  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   9.7  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  206 bits (504), Expect = 1e-55
 Identities = 102/140 (72%), Positives = 115/140 (82%)
 Frame = -3

Query: 610 REFSRXSGNCISKIFXSGRVXIGSVPEVSVCSVQGIIIXRASYFGLYDTARGMLPDXKNT 431
           REF+   GNC++KIF +  +  G      V SVQGIII RA+YFG YDTARGMLPD K T
Sbjct: 154 REFTGL-GNCLTKIFKADGIT-GLYRGFGV-SVQGIIIYRAAYFGFYDTARGMLPDPKKT 210

Query: 430 PIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTS 251
           P +ISW IAQ VTTVAGI+SYPFDTVRRRMMMQSGRAKS+ILYK+T+HCWATI KTEG +
Sbjct: 211 PFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGN 270

Query: 250 AFFKGAFSNVLRGTGGAFVL 191
           AFFKGAFSN+LRGTGGA VL
Sbjct: 271 AFFKGAFSNILRGTGGALVL 290



 Score = 31.9 bits (69), Expect = 0.007
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
 Frame = -3

Query: 412 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFFK 239
           A A + TTVA     P + V+  + +Q  S +   +  YK  I C+  I K +G  ++++
Sbjct: 20  AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74

Query: 238 GAFSNVLR 215
           G  +NV+R
Sbjct: 75  GNLANVIR 82



 Score = 28.7 bits (61), Expect = 0.064
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = -3

Query: 370 YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 236
           YP D  R R+    G+A  +  +    +C   I K +G +  ++G
Sbjct: 134 YPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRG 178


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  206 bits (504), Expect = 1e-55
 Identities = 102/140 (72%), Positives = 115/140 (82%)
 Frame = -3

Query: 610 REFSRXSGNCISKIFXSGRVXIGSVPEVSVCSVQGIIIXRASYFGLYDTARGMLPDXKNT 431
           REF+   GNC++KIF +  +  G      V SVQGIII RA+YFG YDTARGMLPD K T
Sbjct: 154 REFTGL-GNCLTKIFKADGIT-GLYRGFGV-SVQGIIIYRAAYFGFYDTARGMLPDPKKT 210

Query: 430 PIVISWAIAQTVTTVAGIISYPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTS 251
           P +ISW IAQ VTTVAGI+SYPFDTVRRRMMMQSGRAKS+ILYK+T+HCWATI KTEG +
Sbjct: 211 PFLISWGIAQVVTTVAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGN 270

Query: 250 AFFKGAFSNVLRGTGGAFVL 191
           AFFKGAFSN+LRGTGGA VL
Sbjct: 271 AFFKGAFSNILRGTGGALVL 290



 Score = 31.9 bits (69), Expect = 0.007
 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
 Frame = -3

Query: 412 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFFK 239
           A A + TTVA     P + V+  + +Q  S +   +  YK  I C+  I K +G  ++++
Sbjct: 20  AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74

Query: 238 GAFSNVLR 215
           G  +NV+R
Sbjct: 75  GNLANVIR 82



 Score = 28.7 bits (61), Expect = 0.064
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = -3

Query: 370 YPFDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 236
           YP D  R R+    G+A  +  +    +C   I K +G +  ++G
Sbjct: 134 YPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRG 178


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 18/92 (19%), Positives = 33/92 (35%)
 Frame = -3

Query: 523 VCSVQGIIIXRASYFGLYDTARGMLPDXKNTPIVISWAIAQTVTTVAGIISYPFDTVRRR 344
           +  + GIII   S FG+     G +    N            VT + G++ +   T+   
Sbjct: 275 IMKLVGIIIMWYSPFGIMCLIAGKIMSINNLTATAQMLGLYMVTVILGLLFHALITLPTI 334

Query: 343 MMMQSGRAKSDILYKNTIHCWATIAKTEGTSA 248
               + R      ++  +  W T   T  ++A
Sbjct: 335 FWFLT-RQNPAAFFRGMMQAWMTALGTASSAA 365


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +1

Query: 13  FLWNHCITLYLTKNKLLKSFSCLIIHDLRGVAATQN-HIE 129
           F +NH + L+   +   K + C + H+  G   T   HI+
Sbjct: 241 FGYNHVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELHIK 280


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = +2

Query: 389 CGYXLSDGPADYNGCVLXVGQHAAGRVVQTE 481
           CG  L  G        L  G+  A +++QTE
Sbjct: 69  CGTFLGSGGFGIVYKALYKGEQVAAKIIQTE 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,522
Number of Sequences: 438
Number of extensions: 4595
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)