BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_I04
(904 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M90422-1|AAA28741.1| 270|Drosophila melanogaster p40 protein. 109 5e-24
M77133-1|AAA28667.1| 253|Drosophila melanogaster laminin recept... 109 5e-24
BT029094-1|ABJ17027.1| 270|Drosophila melanogaster IP12946p pro... 109 5e-24
AY118899-1|AAM50759.1| 270|Drosophila melanogaster LD09376p pro... 109 5e-24
AL031027-8|CAA19839.1| 270|Drosophila melanogaster EG:80H7.6,FB... 109 5e-24
AE014298-225|AAN09049.1| 270|Drosophila melanogaster CG14792-PB... 109 5e-24
AE014298-224|AAF45638.2| 270|Drosophila melanogaster CG14792-PA... 109 5e-24
AE014298-223|AAN09050.2| 313|Drosophila melanogaster CG14792-PD... 109 5e-24
AE014297-3847|AAF56504.1| 276|Drosophila melanogaster CG17196-P... 29 6.6
>M90422-1|AAA28741.1| 270|Drosophila melanogaster p40 protein.
Length = 270
Score = 109 bits (262), Expect = 5e-24
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = -3
Query: 671 YVDIPVIALCXTDSPVRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLXGVLPRDQRWDVV 492
YV+IPVIA TDSP+R++DIAIPCN KS+HSIGLMWWLLAREVLRL G + R W VV
Sbjct: 139 YVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVV 198
Query: 491 VDLFF 477
VDLFF
Sbjct: 199 VDLFF 203
>M77133-1|AAA28667.1| 253|Drosophila melanogaster laminin receptor
protein.
Length = 253
Score = 109 bits (262), Expect = 5e-24
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = -3
Query: 671 YVDIPVIALCXTDSPVRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLXGVLPRDQRWDVV 492
YV+IPVIA TDSP+R++DIAIPCN KS+HSIGLMWWLLAREVLRL G + R W VV
Sbjct: 122 YVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVV 181
Query: 491 VDLFF 477
VDLFF
Sbjct: 182 VDLFF 186
>BT029094-1|ABJ17027.1| 270|Drosophila melanogaster IP12946p
protein.
Length = 270
Score = 109 bits (262), Expect = 5e-24
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = -3
Query: 671 YVDIPVIALCXTDSPVRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLXGVLPRDQRWDVV 492
YV+IPVIA TDSP+R++DIAIPCN KS+HSIGLMWWLLAREVLRL G + R W VV
Sbjct: 139 YVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVV 198
Query: 491 VDLFF 477
VDLFF
Sbjct: 199 VDLFF 203
>AY118899-1|AAM50759.1| 270|Drosophila melanogaster LD09376p
protein.
Length = 270
Score = 109 bits (262), Expect = 5e-24
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = -3
Query: 671 YVDIPVIALCXTDSPVRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLXGVLPRDQRWDVV 492
YV+IPVIA TDSP+R++DIAIPCN KS+HSIGLMWWLLAREVLRL G + R W VV
Sbjct: 139 YVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVV 198
Query: 491 VDLFF 477
VDLFF
Sbjct: 199 VDLFF 203
>AL031027-8|CAA19839.1| 270|Drosophila melanogaster
EG:80H7.6,FBgn0003517;sta protein.
Length = 270
Score = 109 bits (262), Expect = 5e-24
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = -3
Query: 671 YVDIPVIALCXTDSPVRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLXGVLPRDQRWDVV 492
YV+IPVIA TDSP+R++DIAIPCN KS+HSIGLMWWLLAREVLRL G + R W VV
Sbjct: 139 YVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVV 198
Query: 491 VDLFF 477
VDLFF
Sbjct: 199 VDLFF 203
>AE014298-225|AAN09049.1| 270|Drosophila melanogaster CG14792-PB,
isoform B protein.
Length = 270
Score = 109 bits (262), Expect = 5e-24
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = -3
Query: 671 YVDIPVIALCXTDSPVRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLXGVLPRDQRWDVV 492
YV+IPVIA TDSP+R++DIAIPCN KS+HSIGLMWWLLAREVLRL G + R W VV
Sbjct: 139 YVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVV 198
Query: 491 VDLFF 477
VDLFF
Sbjct: 199 VDLFF 203
>AE014298-224|AAF45638.2| 270|Drosophila melanogaster CG14792-PA,
isoform A protein.
Length = 270
Score = 109 bits (262), Expect = 5e-24
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = -3
Query: 671 YVDIPVIALCXTDSPVRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLXGVLPRDQRWDVV 492
YV+IPVIA TDSP+R++DIAIPCN KS+HSIGLMWWLLAREVLRL G + R W VV
Sbjct: 139 YVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVV 198
Query: 491 VDLFF 477
VDLFF
Sbjct: 199 VDLFF 203
>AE014298-223|AAN09050.2| 313|Drosophila melanogaster CG14792-PD,
isoform D protein.
Length = 313
Score = 109 bits (262), Expect = 5e-24
Identities = 48/65 (73%), Positives = 54/65 (83%)
Frame = -3
Query: 671 YVDIPVIALCXTDSPVRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLXGVLPRDQRWDVV 492
YV+IPVIA TDSP+R++DIAIPCN KS+HSIGLMWWLLAREVLRL G + R W VV
Sbjct: 182 YVNIPVIAFTNTDSPLRYIDIAIPCNNKSAHSIGLMWWLLAREVLRLRGTISRSVEWPVV 241
Query: 491 VDLFF 477
VDLFF
Sbjct: 242 VDLFF 246
>AE014297-3847|AAF56504.1| 276|Drosophila melanogaster CG17196-PA
protein.
Length = 276
Score = 29.5 bits (63), Expect = 6.6
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -3
Query: 320 CTRCSSCLKSTPCSRRMVCPGTR*VEHNCRRTSRRHXSALVGWIRSRLECCI 165
C R SS +KS P R++ PGT + H C + W + +CCI
Sbjct: 77 CYRTSSAVKSLPQERQIPKPGTEHLWHYCDICQKLMPPR--SWHCALCKCCI 126
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,174,323
Number of Sequences: 53049
Number of extensions: 666537
Number of successful extensions: 1619
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1616
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -