Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_I04
         (904 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical pr...    75   9e-14
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    30   2.0  
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical
           protein B0393.1 protein.
          Length = 276

 Score = 74.5 bits (175), Expect = 9e-14
 Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
 Frame = -3

Query: 671 YVDIPVIALCXTDSPVRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLXGVLPRDQRW--- 501
           YV +PVI+   T+SP++ +DI +PCN K   SIGLMWW+LARE+L L G + R   +   
Sbjct: 139 YVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAREILILRGKISRQTGFVLE 198

Query: 500 --DVVVDLFF 477
             +++ DL+F
Sbjct: 199 GKEIMPDLYF 208


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
            protein T19D12.1 protein.
          Length = 1844

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
 Frame = +1

Query: 487  STTTSQRWSRGSTPXSLSTSRANNHHIKPIEWEDLV------LHGIAMSTNLTGESVXHK 648
            STTTS   + GSTP   S++ A+   + P    + +        G + +  LT  S    
Sbjct: 840  STTTSPSTTTGSTPAPQSSTVASTTTVSPYTTTECICTTVSNTFGTSTTQGLTSSSAQST 899

Query: 649  AITGMST 669
            A TG+ST
Sbjct: 900  ASTGVST 906


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = -3

Query: 332 RPACCTRCSSCLKSTPCSRRMVCPGTR*VEHNCRRTSRRHXSALV 198
           R  CCTRC +C +   C     C G     H  + T+      L+
Sbjct: 105 RTCCCTRCCTCCRPCCCGCGCGCCGCGGGGHFLKSTAMARPKPLI 149


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,217,942
Number of Sequences: 27780
Number of extensions: 322446
Number of successful extensions: 741
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)