Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_H22
(858 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 25 0.68
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.8
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.8
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.8
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.8
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.8
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.8
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 4.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.8
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 22 6.3
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 22 6.3
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 25.4 bits (53), Expect = 0.68
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2
Query: 776 PPPPPPPXXG 747
PPPPPPP G
Sbjct: 1356 PPPPPPPSSG 1365
Score = 23.8 bits (49), Expect = 2.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2
Query: 776 PPPPPPP 756
PPPPPPP
Sbjct: 1355 PPPPPPP 1361
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 5 PFWYKEKAXGTPLSLGAPS 61
P Y A GTP+S G P+
Sbjct: 362 PSGYIRSAFGTPISTGRPA 380
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 5 PFWYKEKAXGTPLSLGAPS 61
P Y A GTP+S G P+
Sbjct: 362 PSGYIRSAFGTPISTGRPA 380
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 5 PFWYKEKAXGTPLSLGAPS 61
P Y A GTP+S G P+
Sbjct: 362 PSGYIRSAFGTPISTGRPA 380
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 5 PFWYKEKAXGTPLSLGAPS 61
P Y A GTP+S G P+
Sbjct: 362 PSGYIRSAFGTPISTGRPA 380
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 5 PFWYKEKAXGTPLSLGAPS 61
P Y A GTP+S G P+
Sbjct: 362 PSGYIRSAFGTPISTGRPA 380
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 5 PFWYKEKAXGTPLSLGAPS 61
P Y A GTP+S G P+
Sbjct: 362 PSGYIRSAFGTPISTGRPA 380
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.6 bits (46), Expect = 4.8
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 775 PPPPPPXXGG 746
PPPPPP G
Sbjct: 343 PPPPPPSSSG 352
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 5 PFWYKEKAXGTPLSLGAPS 61
P Y A GTP+S G P+
Sbjct: 430 PSGYIRSAFGTPISTGRPA 448
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.8
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 5 PFWYKEKAXGTPLSLGAPS 61
P Y A GTP+S G P+
Sbjct: 430 PSGYIRSAFGTPISTGRPA 448
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 22.2 bits (45), Expect = 6.3
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 38 PLSLGAPSKGNIFKK 82
PLSLGA S NIF K
Sbjct: 980 PLSLGALSVPNIFVK 994
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 22.2 bits (45), Expect = 6.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3
Query: 772 PPPPPXXGG 746
PPPPP GG
Sbjct: 376 PPPPPIRGG 384
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,090
Number of Sequences: 438
Number of extensions: 3526
Number of successful extensions: 37
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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