Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_H10
         (789 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    25   0.80 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   0.80 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.4  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   5.7  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   5.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   5.7  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   9.9  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 434 TTTDPNPRXTPAPCTTASPRPP 369
           ++  PNPR   AP ++ S  PP
Sbjct: 509 SSPSPNPRIASAPSSSTSSSPP 530


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 25.0 bits (52), Expect = 0.80
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 404 PAPCTTASPRPPREDTPRNSSTTPP 330
           P P    SP+ P+  +P N S  PP
Sbjct: 23  PQPSPHQSPQAPQRGSPPNPSQGPP 47


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
 Frame = -2

Query: 482 ASLGXTVRNRHRI*RATTTDPNPRXTPAPCTTASPRPPREDTPRN-SSTTPP 330
           ASL  T  + H      TT      T    TT +      +T +N S+TTPP
Sbjct: 639 ASLSSTHSHPHEPGAPATTITTITTTTTTTTTTTTTTTTPNTTQNASATTPP 690


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +1

Query: 37  SSTTLTEPSFDWRTAFRRHLLSHRTHRPELAQVRNVN 147
           SST+  +P   ++     H  SH+  R  L     VN
Sbjct: 104 SSTSSNDPKNQYKNQNNNHYTSHQHLRTHLRGTLTVN 140


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 258 IVDIADGADDYAPIEANETGFLSDTTGYL 172
           IV I+ GAD Y P+ A   G +     Y+
Sbjct: 320 IVVISAGADAYPPLAAIVLGAIGSIVFYI 348


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = -1

Query: 465 SPKSTPNLASNYNRPQPPPYAGALHHRKSTASTRGHTPELLHDPSRTVLEESLK 304
           +P+ST NL   YN     P++     R S   T  ++ +++ D S +  EE LK
Sbjct: 314 NPESTGNLVYIYNN----PFSDVEERRVS--KTAMNSNQIVSDNSLSSSEEKLK 361


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +1

Query: 379 GLAVVQGAGVXRGLGSVVV 435
           G+ +V G G+  G+G +++
Sbjct: 825 GVFIVVGVGIIGGIGLIII 843


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,044
Number of Sequences: 438
Number of extensions: 4024
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)