Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_H09
(773 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 34 0.65
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 34 0.65
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 34 0.65
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 34 0.65
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 34 0.65
BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding prote... 33 1.5
BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein. 33 1.5
BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding prote... 33 1.5
AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding prot... 33 1.5
AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein N... 33 1.5
DQ854815-1|ABI75145.1| 112|Homo sapiens hyperpolarization-activ... 30 8.0
BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein. 30 8.0
AK025429-1|BAB15128.1| 274|Homo sapiens protein ( Homo sapiens ... 30 8.0
AJ133727-1|CAB42630.1| 889|Homo sapiens hyperpolarization-activ... 30 8.0
AJ012582-1|CAB42602.1| 889|Homo sapiens hyperpolarization-activ... 30 8.0
AF279145-1|AAK52094.1| 564|Homo sapiens tumor endothelial marke... 30 8.0
AC112230-1|AAX88860.1| 329|Homo sapiens unknown protein. 30 8.0
AC005559-2|AAC33280.2| 528|Homo sapiens hyperpolarization activ... 30 8.0
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein. 30 8.0
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 33.9 bits (74), Expect = 0.65
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +3
Query: 627 PXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
P P P P P P GPP P P P RPP
Sbjct: 287 PPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPP 328
Score = 31.9 bits (69), Expect = 2.6
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 612 PGXXXPXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
PG P P P P P PR GPP + P P PP
Sbjct: 307 PGPPPPQQGPPPP-PGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPP 352
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 33.9 bits (74), Expect = 0.65
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +3
Query: 627 PXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
P P P P P P GPP P P P RPP
Sbjct: 287 PPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPP 328
Score = 31.9 bits (69), Expect = 2.6
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 612 PGXXXPXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
PG P P P P P PR GPP + P P PP
Sbjct: 307 PGPPPPQQGPPPP-PGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPP 352
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 33.9 bits (74), Expect = 0.65
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +3
Query: 627 PXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
P P P P P P GPP P P P RPP
Sbjct: 214 PPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPP 255
Score = 31.9 bits (69), Expect = 2.6
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 612 PGXXXPXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
PG P P P P P PR GPP + P P PP
Sbjct: 234 PGPPPPQQGPPPP-PGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPP 279
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 33.9 bits (74), Expect = 0.65
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +3
Query: 627 PXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
P P P P P P GPP P P P RPP
Sbjct: 324 PPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPP 365
Score = 31.9 bits (69), Expect = 2.6
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 612 PGXXXPXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
PG P P P P P PR GPP + P P PP
Sbjct: 344 PGPPPPQQGPPPP-PGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPP 389
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 33.9 bits (74), Expect = 0.65
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +3
Query: 627 PXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
P P P P P P GPP P P P RPP
Sbjct: 287 PPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPP 328
Score = 31.9 bits (69), Expect = 2.6
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 612 PGXXXPXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
PG P P P P P PR GPP + P P PP
Sbjct: 307 PGPPPPQQGPPPP-PGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPP 352
>BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 32.7 bits (71), Expect = 1.5
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 612 PGXXXPXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
PG P P P P P GPP +P P P P PP
Sbjct: 448 PGLRGPLPRLLPPGPPPGRP-PGPPPGPPPGLPPGPPPRGPPPRLPP 493
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +3
Query: 627 PXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
P P P P P P GPP +P P P RPP
Sbjct: 406 PMPGPPPLGPPPAPP--LRPPGPPTGLPPGPPPGAPPFLRPP 445
>BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein.
Length = 400
Score = 32.7 bits (71), Expect = 1.5
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 612 PGXXXPXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
PG P P P P P GPP +P P P P PP
Sbjct: 207 PGLRGPLPRLLPPGPPPGRP-PGPPPGPPPGLPPGPPPRGPPPRLPP 252
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +3
Query: 627 PXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
P P P P P P GPP +P P P RPP
Sbjct: 165 PMPGPPPLGPPPAPP--LRPPGPPTGLPPGPPPGAPPFLRPP 204
>BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 32.7 bits (71), Expect = 1.5
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 612 PGXXXPXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
PG P P P P P GPP +P P P P PP
Sbjct: 448 PGLRGPLPRLLPPGPPPGRP-PGPPPGPPPGLPPGPPPRGPPPRLPP 493
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +3
Query: 627 PXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
P P P P P P GPP +P P P RPP
Sbjct: 406 PMPGPPPLGPPPAPP--LRPPGPPTGLPPGPPPGAPPFLRPP 445
>AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding protein
SNP70 protein.
Length = 641
Score = 32.7 bits (71), Expect = 1.5
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 612 PGXXXPXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
PG P P P P P GPP +P P P P PP
Sbjct: 448 PGLRGPLPRLLPPGPPPGRP-PGPPPGPPPGLPPGPPPRGPPPRLPP 493
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +3
Query: 627 PXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
P P P P P P GPP +P P P RPP
Sbjct: 406 PMPGPPPLGPPPAPP--LRPPGPPTGLPPGPPPGAPPFLRPP 445
>AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein
NpwBP protein.
Length = 641
Score = 32.7 bits (71), Expect = 1.5
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 612 PGXXXPXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
PG P P P P P GPP +P P P P PP
Sbjct: 448 PGLRGPLPRLLPPGPPPGRP-PGPPPGPPPGLPPGPPPRGPPPRLPP 493
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +3
Query: 627 PXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
P P P P P P GPP +P P P RPP
Sbjct: 406 PMPGPPPLGPPPAPP--LRPPGPPTGLPPGPPPGAPPFLRPP 445
>DQ854815-1|ABI75145.1| 112|Homo sapiens
hyperpolarization-activated cyclic nucleotide-gated
potassium channel 2 protein.
Length = 112
Score = 30.3 bits (65), Expect = 8.0
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +3
Query: 627 PXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
P PAP P P P PP P P P P + P
Sbjct: 14 PGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHP 55
>BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein.
Length = 600
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +3
Query: 591 PXLXXXSPGXXXPXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
P L P P P P P P P PP + P P PP
Sbjct: 87 PLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPP 140
>AK025429-1|BAB15128.1| 274|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21776 fis, clone HEP00171. ).
Length = 274
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 639 PAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
P P AP P P PP P P P P RPP
Sbjct: 234 PPPSAPTPPIPSPPSTLPPPPQAP--PPNRAPPPSRPP 269
>AJ133727-1|CAB42630.1| 889|Homo sapiens
hyperpolarization-activated cyclic nucleotide-gated
channel hHCN2 protein.
Length = 889
Score = 30.3 bits (65), Expect = 8.0
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +3
Query: 627 PXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
P PAP P P P PP P P P P + P
Sbjct: 14 PGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHP 55
>AJ012582-1|CAB42602.1| 889|Homo sapiens
hyperpolarization-activated cation channel HCN2 protein.
Length = 889
Score = 30.3 bits (65), Expect = 8.0
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +3
Query: 627 PXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
P PAP P P P PP P P P P + P
Sbjct: 14 PGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHP 55
>AF279145-1|AAK52094.1| 564|Homo sapiens tumor endothelial marker 8
precursor protein.
Length = 564
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 639 PAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
P P AP P P PP P P P P RPP
Sbjct: 524 PPPSAPTPPIPSPPSTLPPPPQAP--PPNRAPPPSRPP 559
>AC112230-1|AAX88860.1| 329|Homo sapiens unknown protein.
Length = 329
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +3
Query: 639 PAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
P P AP P P PP P P P P RPP
Sbjct: 289 PPPSAPTPPIPSPPSTLPPPPQAP--PPNRAPPPSRPP 324
>AC005559-2|AAC33280.2| 528|Homo sapiens hyperpolarization
activated cyclic nucleotide-gated potassium channel 2
protein.
Length = 528
Score = 30.3 bits (65), Expect = 8.0
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +3
Query: 627 PXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
P PAP P P P PP P P P P + P
Sbjct: 14 PGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHP 55
>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
Length = 1217
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/54 (27%), Positives = 16/54 (29%)
Frame = +3
Query: 591 PXLXXXSPGXXXPXXXPAPXAPXPXXPRXAXXXGPPXXIPXXXPXXXPXPXRPP 752
P L P P P P P P P PP + P P PP
Sbjct: 632 PLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPP 685
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,562,089
Number of Sequences: 237096
Number of extensions: 671033
Number of successful extensions: 4277
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3824
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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