Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_H08
(754 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 25 0.58
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 25 0.58
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 24 1.8
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 3.1
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 3.1
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 23 3.1
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 7.1
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 7.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 7.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 7.1
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 9.4
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 9.4
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 25.4 bits (53), Expect = 0.58
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 384 TTSQRWSRGSTPRSLNTSRANNHHIKP 464
T +Q WSRG+T SL+ S + + P
Sbjct: 18 TQAQHWSRGNTWLSLDNSNMSMSSVGP 44
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 25.4 bits (53), Expect = 0.58
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 384 TTSQRWSRGSTPRSLNTSRANNHHIKP 464
T +Q WSRG+T SL+ S + + P
Sbjct: 18 TQAQHWSRGNTWLSLDNSNMSMSSVGP 44
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 23.8 bits (49), Expect = 1.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 373 TNQPQHPSAGHGEAHHEASTLH 438
T P H + GHG +H A+ H
Sbjct: 411 TPGPHHHTMGHGHSHIHATPHH 432
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 3.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 61 CINTLHWLIILHES 20
C N ++W+I LH S
Sbjct: 418 CFNLMYWIIYLHIS 431
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 3.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -1
Query: 61 CINTLHWLIILHES 20
C N ++W+I LH S
Sbjct: 418 CFNLMYWIIYLHIS 431
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 23.0 bits (47), Expect = 3.1
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 283 SNYFWFSWYHSLFLGLVVHPFHFLQGHGRRTNQPQ 387
S+YF S+ L G V HP Q +G PQ
Sbjct: 2 SSYFANSYIPDLRNGGVEHPHQHQQHYGAAVQVPQ 36
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -1
Query: 421 RGVLPRDQRWDVVVDLFFYRDPEESEKDEQQAQ 323
R +LPR ++ + LF Y P SE ++ ++
Sbjct: 603 RLLLPRGKKEGMPFQLFLYVSPVSSEYNQYNSR 635
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -1
Query: 421 RGVLPRDQRWDVVVDLFFYRDPEESEKDEQQAQ 323
R +LPR ++ + LF Y P SE ++ ++
Sbjct: 603 RLLLPRGKKEGMPFQLFLYVSPVSSEYNQYNSR 635
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 326 GLLFILFTFFRVTVEEQ 376
G+LF+LF+F R + Q
Sbjct: 20 GVLFVLFSFLRTRTKLQ 36
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 326 GLLFILFTFFRVTVEEQ 376
G+LF+LF+F R + Q
Sbjct: 20 GVLFVLFSFLRTRTKLQ 36
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.4 bits (43), Expect = 9.4
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = -3
Query: 497 YPMQHQVFPLYWFDVVVV 444
+P ++++P Y+FD V+
Sbjct: 159 FPAIYEIYPNYFFDSSVI 176
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.4 bits (43), Expect = 9.4
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = -3
Query: 497 YPMQHQVFPLYWFDVVVV 444
+P ++++P Y+FD V+
Sbjct: 159 FPAIYEIYPNYFFDSSVI 176
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,285
Number of Sequences: 438
Number of extensions: 3786
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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