Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_H07
         (1195 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032632-7|CAA21586.1|  313|Caenorhabditis elegans Hypothetical ...    31   2.1  

>AL032632-7|CAA21586.1|  313|Caenorhabditis elegans Hypothetical
           protein Y11D7A.11 protein.
          Length = 313

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
 Frame = +2

Query: 470 PANRXXPTKTGXXATRXDXNAPNXKGGXEXPXDQXXEGRP--PSKDXPP 610
           P  R  P  TG    R +   P  KG    P DQ  +G P  P  D  P
Sbjct: 241 PGLRGAPGATGSQGPRGNDGRPGNKGPAGPPGDQGFDGAPGGPGADGEP 289


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.312    0.131    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,030,474
Number of Sequences: 27780
Number of extensions: 99627
Number of successful extensions: 257
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3276419812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)