Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_H05
         (798 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609...    31   0.80 
03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701,431...    31   1.1  
12_02_0640 - 21447470-21448309                                         30   2.5  
12_02_0635 - 21430245-21431156                                         30   2.5  
05_01_0380 + 2978256-2979284                                           29   4.3  
11_02_0073 - 8020401-8020512,8020594-8020679,8020761-8020921,802...    28   9.9  
01_06_0278 - 28111655-28112531,28113896-28114029,28114131-281149...    28   9.9  

>07_03_1272 -
           25360180-25360286,25360454-25360658,25360748-25360945,
           25361034-25361296,25361865-25362009
          Length = 305

 Score = 31.5 bits (68), Expect = 0.80
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -1

Query: 549 FCXTPXSPVRIXGPXVSXATPXCSXXXGLMWWVVGTWKWLRLRXVLPRDQRWDVVVDLFF 370
           FC T  SP+R     +  A        G ++W++     L++R  +    +WDV+VDLFF
Sbjct: 151 FCDTD-SPMRYVDIGIP-ANNKGKQSIGCLFWLLARMV-LQMRGTILPGHKWDVMVDLFF 207

Query: 369 W 367
           +
Sbjct: 208 Y 208


>03_01_0582 -
           4318837-4318967,4319219-4319399,4319504-4319701,
           4319791-4320053,4320453-4320597
          Length = 305

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -1

Query: 549 FCXTPXSPVRIXGPXVSXATPXCSXXXGLMWWVVGTWKWLRLRXVLPRDQRWDVVVDLFF 370
           FC T  SP+R     +  A        G ++W++     L++R  +    +WDV+VDLFF
Sbjct: 151 FCDTD-SPMRYVDIGIP-ANNKGRNSIGCLFWLLARMV-LQMRGTILPGHKWDVMVDLFF 207

Query: 369 W 367
           +
Sbjct: 208 Y 208


>12_02_0640 - 21447470-21448309
          Length = 279

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
 Frame = +3

Query: 618 PLTTXQXKXPRQXRLXPGLT---KXHRLXKPPRXPXXTPPPXPG 740
           P  T + K P+  R  P  T   +      PPR    TPPP PG
Sbjct: 192 PPPTTKKKKPQSSRRPPARTPPPERRESPSPPRGRPRTPPPPPG 235


>12_02_0635 - 21430245-21431156
          Length = 303

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
 Frame = +3

Query: 618 PLTTXQXKXPRQXRLXPGLT---KXHRLXKPPRXPXXTPPPXPG 740
           P  T + K P+  R  P  T   +      PPR    TPPP PG
Sbjct: 189 PPPTTKKKKPQSSRRPPARTPPPERRESPSPPRGRPRTPPPPPG 232


>05_01_0380 + 2978256-2979284
          Length = 342

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +3

Query: 651 QXRLXPGLTKXHRLXKPPRXPXXTPPPXP 737
           Q RL  G T+  R+  PP  P   PPP P
Sbjct: 12  QRRLALGRTERVRMPPPPPPPPPPPPPPP 40


>11_02_0073 -
           8020401-8020512,8020594-8020679,8020761-8020921,
           8021196-8021400,8021664-8021697,8022352-8022422,
           8023363-8023542,8023625-8023765,8023859-8023975,
           8024074-8024469
          Length = 500

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 14/49 (28%), Positives = 19/49 (38%)
 Frame = +3

Query: 591 GSNGPXAGXPLTTXQXKXPRQXRLXPGLTKXHRLXKPPRXPXXTPPPXP 737
           G  GP    P+   +   P   R+ P +    RL    + P   PPP P
Sbjct: 427 GGGGPGFNQPMIYGRGPAPAGMRMVPMVLPDGRLGYVLQQPGGIPPPPP 475


>01_06_0278 -
           28111655-28112531,28113896-28114029,28114131-28114992,
           28115636-28115735,28115848-28115939,28116031-28116122
          Length = 718

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 447 GTWKWLRLRXVLPRDQRWDVVVDL 376
           G+WKWL+   VL   Q W V+V L
Sbjct: 510 GSWKWLKSARVLLIIQFWAVLVSL 533


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,214,613
Number of Sequences: 37544
Number of extensions: 279901
Number of successful extensions: 1020
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)