BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_H03
(824 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
K02575-1|AAA36502.1| 173|Homo sapiens protein ( Human salivary ... 31 3.8
AL137724-1|CAB70894.1| 439|Homo sapiens hypothetical protein pr... 31 5.1
AC078834-1|AAS01989.1| 439|Homo sapiens unknown protein. 31 5.1
X07517-1|CAA30395.2| 236|Homo sapiens salivary proline-rich pro... 31 6.7
X07516-1|CAA30394.2| 297|Homo sapiens salivary proline-rich pro... 31 6.7
S62928-1|AAB27288.2| 297|Homo sapiens PRB1M protein precursor p... 31 6.7
S52986-1|AAA13341.2| 331|Homo sapiens basic salivary proline-ri... 31 6.7
M97220-1|AAB05816.1| 331|Homo sapiens salivary proline-rich pro... 31 6.7
K03204-1|AAA60185.1| 331|Homo sapiens PRB1 protein. 31 6.7
BC044827-1|AAH44827.1| 338|Homo sapiens PRB2 protein protein. 31 6.7
Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase... 30 8.8
S62941-1|AAB27289.1| 358|Homo sapiens Ps 2 protein. 30 8.8
AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 30 8.8
AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 30 8.8
AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,... 30 8.8
>K02575-1|AAA36502.1| 173|Homo sapiens protein ( Human salivary
proline-rich protein 1 gene, segment 1. ).
Length = 173
Score = 31.5 bits (68), Expect = 3.8
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = +1
Query: 640 PPXKXNXXXGPPPX--RXXGTXAXQXXTPXGXPPXGPHXXPPTXXXPXKQSP 789
PP N GPPP + G P G PP G PP +SP
Sbjct: 23 PPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGKRSRSP 74
>AL137724-1|CAB70894.1| 439|Homo sapiens hypothetical protein
protein.
Length = 439
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 670 PPPXRXXGTXAXQXXTPXGXPPXGPHXXPPTXXXPXKQSPXQXXP 804
PPP + Q P PP P PP P Q P Q P
Sbjct: 31 PPPHQPQPQQPQQQPPPQHQPPHQPPHQPPPQHQPPPQHPPQHPP 75
>AC078834-1|AAS01989.1| 439|Homo sapiens unknown protein.
Length = 439
Score = 31.1 bits (67), Expect = 5.1
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 670 PPPXRXXGTXAXQXXTPXGXPPXGPHXXPPTXXXPXKQSPXQXXP 804
PPP + Q P PP P PP P Q P Q P
Sbjct: 31 PPPHQPQPQQPQQQPPPQHQPPHQPPHQPPPQHQPPPQHPPQHPP 75
>X07517-1|CAA30395.2| 236|Homo sapiens salivary proline-rich
protein protein.
Length = 236
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Frame = +1
Query: 640 PPXKXNXXXGPPPX--RXXGTXAXQXXTPXGXPPXGPHXXPPTXXXPXKQS 786
PP N GPPP + G P G PP G PP QS
Sbjct: 128 PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQS 178
>X07516-1|CAA30394.2| 297|Homo sapiens salivary proline-rich
protein protein.
Length = 297
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Frame = +1
Query: 640 PPXKXNXXXGPPPX--RXXGTXAXQXXTPXGXPPXGPHXXPPTXXXPXKQS 786
PP N GPPP + G P G PP G PP QS
Sbjct: 189 PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQS 239
>S62928-1|AAB27288.2| 297|Homo sapiens PRB1M protein precursor
protein.
Length = 297
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Frame = +1
Query: 640 PPXKXNXXXGPPPX--RXXGTXAXQXXTPXGXPPXGPHXXPPTXXXPXKQS 786
PP N GPPP + G P G PP G PP QS
Sbjct: 189 PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQS 239
>S52986-1|AAA13341.2| 331|Homo sapiens basic salivary proline-rich
protein protein.
Length = 331
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Frame = +1
Query: 640 PPXKXNXXXGPPPX--RXXGTXAXQXXTPXGXPPXGPHXXPPTXXXPXKQS 786
PP N GPPP + G P G PP G PP QS
Sbjct: 223 PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQS 273
>M97220-1|AAB05816.1| 331|Homo sapiens salivary proline-rich
protein protein.
Length = 331
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Frame = +1
Query: 640 PPXKXNXXXGPPPX--RXXGTXAXQXXTPXGXPPXGPHXXPPTXXXPXKQS 786
PP N GPPP + G P G PP G PP QS
Sbjct: 223 PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQS 273
>K03204-1|AAA60185.1| 331|Homo sapiens PRB1 protein.
Length = 331
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Frame = +1
Query: 640 PPXKXNXXXGPPPX--RXXGTXAXQXXTPXGXPPXGPHXXPPTXXXPXKQS 786
PP N GPPP + G P G PP G PP QS
Sbjct: 223 PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQS 273
>BC044827-1|AAH44827.1| 338|Homo sapiens PRB2 protein protein.
Length = 338
Score = 30.7 bits (66), Expect = 6.7
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Frame = +1
Query: 640 PPXKXNXXXGPPPX--RXXGTXAXQXXTPXGXPPXGPHXXPPTXXXPXKQS 786
PP N GPPP + G P G PP G PP QS
Sbjct: 230 PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQS 280
>Y11354-1|CAA72189.1| 1083|Homo sapiens subunit of RNA polymerase II
transcription factor protein.
Length = 1083
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +1
Query: 613 PATXPDPXAPPXKXNXXXGPPPXRXXGTXAXQXXTPXGXPPXGPHXXPP 759
PA P AP PPP T A P G P P PP
Sbjct: 250 PAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPP 298
>S62941-1|AAB27289.1| 358|Homo sapiens Ps 2 protein.
Length = 358
Score = 30.3 bits (65), Expect = 8.8
Identities = 17/51 (33%), Positives = 18/51 (35%), Gaps = 2/51 (3%)
Frame = +1
Query: 640 PPXKXNXXXGPPPX--RXXGTXAXQXXTPXGXPPXGPHXXPPTXXXPXKQS 786
PP N GPPP + G P G PP G PP QS
Sbjct: 250 PPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSQS 300
>AY623115-1|AAT38111.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +1
Query: 613 PATXPDPXAPPXKXNXXXGPPPXRXXGTXAXQXXTPXGXPPXGPHXXPP 759
PA P AP PPP T A P G P P PP
Sbjct: 252 PAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPP 300
>AL137077-2|CAI11045.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +1
Query: 613 PATXPDPXAPPXKXNXXXGPPPXRXXGTXAXQXXTPXGXPPXGPHXXPP 759
PA P AP PPP T A P G P P PP
Sbjct: 252 PAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPP 300
>AL109911-2|CAI19182.1| 1085|Homo sapiens TAF4 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 135kD
protein.
Length = 1085
Score = 30.3 bits (65), Expect = 8.8
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = +1
Query: 613 PATXPDPXAPPXKXNXXXGPPPXRXXGTXAXQXXTPXGXPPXGPHXXPP 759
PA P AP PPP T A P G P P PP
Sbjct: 252 PAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPP 300
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,729,876
Number of Sequences: 237096
Number of extensions: 1354225
Number of successful extensions: 3632
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3370
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -