Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_H02
(982 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.007
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.007
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 1.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 5.3
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 5.3
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 7.1
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 36.3 bits (80), Expect = 0.007
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = +1
Query: 481 PADXNPKXPQKXAQHPXX--PRPQNXPXSPANXTPXPXXXXPHQPXPXAXTXPXPTXPAX 654
P+ P PQ + P PRP P SPA+ P P + P + P P PA
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPP-----IPSKAPPIPSSLPPPAQPAA 179
Query: 655 TXKTPP 672
K+PP
Sbjct: 180 PVKSPP 185
Score = 32.7 bits (71), Expect = 0.081
Identities = 19/80 (23%), Positives = 25/80 (31%)
Frame = +1
Query: 439 AXPPPPXXPTTXXXPADXNPKXPQKXAQHPXXPRPQNXPXSPANXTPXPXXXXPHQPXPX 618
A PP P ++ P P P + P P+ P P P P
Sbjct: 120 ASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP-PAQPA 178
Query: 619 AXTXPXPTXPAXTXKTPPXP 678
A P+ P+ PP P
Sbjct: 179 APVKSPPSAPSLPSAVPPMP 198
Score = 29.5 bits (63), Expect = 0.76
Identities = 22/90 (24%), Positives = 27/90 (30%), Gaps = 1/90 (1%)
Frame = +3
Query: 414 PXSPHRTXRPXXP-PXXPHNPXXTRGXEPQKXPEXXPTPPXTPPXKQXXKPSXRHXRXAT 590
P +P RP P P P + P + P P PP Q P + A
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP-VKSPPSAP 188
Query: 591 TXPXPTXPXSXHXPXPHXXXXXXQNTPXTP 680
+ P P P P NT P
Sbjct: 189 SLPSAVPPMPPKVPPPPLSQAPVANTSSRP 218
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 36.3 bits (80), Expect = 0.007
Identities = 23/87 (26%), Positives = 27/87 (31%), Gaps = 1/87 (1%)
Frame = +1
Query: 421 AXTGHXAXPPPPXXPTTXXXPADXNPKXPQKXAQHPXXPRPQNXPXSPANXTPXPXXXXP 600
A +G P P P+ P P+ A P P P P P P P
Sbjct: 1154 APSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Query: 601 HQPXP-XAXTXPXPTXPAXTXKTPPXP 678
P + P P T K PP P
Sbjct: 1214 STAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 31.1 bits (67), Expect = 0.25
Identities = 28/111 (25%), Positives = 34/111 (30%), Gaps = 5/111 (4%)
Frame = +1
Query: 361 KPTTXXXPXXXRRATXXDRXAXTGHXAXPPPPXXPTTXXXPADXNPKXPQKXAQHPXXPR 540
KP+ P A +G P P P+ P P+ P P
Sbjct: 1096 KPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGA-PPVPKPSVAAPPVPA 1154
Query: 541 PQNXPXSP-----ANXTPXPXXXXPHQPXPXAXTXPXPTXPAXTXKTPPXP 678
P P P A P P P P P A P P P+ + PP P
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP-PPS---EAPPVP 1201
Score = 29.1 bits (62), Expect = 1.0
Identities = 22/79 (27%), Positives = 26/79 (32%), Gaps = 1/79 (1%)
Frame = +1
Query: 445 PPPPXXPTTXXXPADXN-PKXPQKXAQHPXXPRPQNXPXSPANXTPXPXXXXPHQPXPXA 621
PP P T P + P P+ + P P P P S P P P P P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPP-VPAPSG 1090
Query: 622 XTXPXPTXPAXTXKTPPXP 678
P P + PP P
Sbjct: 1091 ----IPPVPKPSVAAPPVP 1105
Score = 27.9 bits (59), Expect = 2.3
Identities = 22/87 (25%), Positives = 27/87 (31%), Gaps = 1/87 (1%)
Frame = +1
Query: 421 AXTGHXAXPPPPXXPTTXXXPADXNPKXPQKXAQHPXXPRPQNXPXSPANXTPXPXXXXP 600
A +G P P P P+ P P+ P P P P P P P
Sbjct: 1078 APSGAPPVPAPSGIPPVPK-PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 601 H-QPXPXAXTXPXPTXPAXTXKTPPXP 678
P + P PA + PP P
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSG-APPVP 1162
Score = 27.9 bits (59), Expect = 2.3
Identities = 21/76 (27%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
Frame = +1
Query: 448 PPPXXPTTXXXPADXNPKXPQKXAQHPXXPRPQNXPXSPANXTPXPXXXXPHQPXPXAXT 627
PP P P + P P P P S A P P P P P A
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPP--VPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKA 1236
Query: 628 XPXP--TXPAXTXKTP 669
P P + A + TP
Sbjct: 1237 PPVPAPSSEAPSVSTP 1252
Score = 27.5 bits (58), Expect = 3.1
Identities = 31/158 (19%), Positives = 37/158 (23%), Gaps = 5/158 (3%)
Frame = +1
Query: 454 PXXPTTXXXPADXNPKXPQKXAQHPXXPRPQNXPXSPANX----TPXPXXXXPHQPXPXA 621
P P + P P ++ P P P P PA P P P P P
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV 1109
Query: 622 XTXPXPTXPAXTXKTPPXPXGTXXXXN-DXXXXXXXXXXXXXXXXXXXXXXXXXPXPKTX 798
P P PP P + P PK
Sbjct: 1110 AVPPVPAPSG----APPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPS 1165
Query: 799 PXPPPXKXDTXXGPHXXXXXXXXXXXPPXXKTPXXPXP 912
PP + P PP + P P P
Sbjct: 1166 VAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 27.5 bits (58), Expect = 3.1
Identities = 19/74 (25%), Positives = 26/74 (35%)
Frame = +1
Query: 448 PPPXXPTTXXXPADXNPKXPQKXAQHPXXPRPQNXPXSPANXTPXPXXXXPHQPXPXAXT 627
PPP P+ P P A+ P P P + +P+ TP PH +
Sbjct: 1211 PPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSS--EAPSVSTPRSSVPSPH-----SNA 1263
Query: 628 XPXPTXPAXTXKTP 669
P PT + P
Sbjct: 1264 SPSPTSSSMASAAP 1277
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/78 (23%), Positives = 25/78 (32%)
Frame = +1
Query: 445 PPPPXXPTTXXXPADXNPKXPQKXAQHPXXPRPQNXPXSPANXTPXPXXXXPHQPXPXAX 624
P PP P P+ P + P P+P P +P + P P A
Sbjct: 575 PQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVP--VVPEAP 632
Query: 625 TXPXPTXPAXTXKTPPXP 678
+ P P + P P
Sbjct: 633 SVPQPPAAPVVPEVPSVP 650
Score = 26.6 bits (56), Expect = 5.3
Identities = 22/82 (26%), Positives = 27/82 (32%), Gaps = 4/82 (4%)
Frame = +1
Query: 445 PPPPXXPTTXXXPADXNPKXPQKXAQHPXXPRPQNXPXSPANXTPXPXXXXPHQP----X 612
P PP P A P PQ+ A P P + P PA P +P
Sbjct: 605 PQPPVAPV-----APEVPSVPQRPAV-PVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVV 658
Query: 613 PXAXTXPXPTXPAXTXKTPPXP 678
P A + P P + P P
Sbjct: 659 PEAPSVPQPPAAPVVPEVPSVP 680
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 5.3
Identities = 21/78 (26%), Positives = 23/78 (29%)
Frame = +1
Query: 445 PPPPXXPTTXXXPADXNPKXPQKXAQHPXXPRPQNXPXSPANXTPXPXXXXPHQPXPXAX 624
PPPP P AD N + P P TP P P P
Sbjct: 191 PPPPPPPAVEDQAADANEPDDYYSSGRAVSPE------IPPTYTPKQADPLPAPPPP--- 241
Query: 625 TXPXPTXPAXTXKTPPXP 678
P PT P + T P
Sbjct: 242 --PPPTLPPQSTNTSQLP 257
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.6 bits (56), Expect = 5.3
Identities = 19/82 (23%), Positives = 23/82 (28%), Gaps = 2/82 (2%)
Frame = +3
Query: 441 PXXPPXXPHNPXXTRGXEPQKXPEXXPTPPXTPPXKQXXKPSXRHXRXATT--XPXPTXP 614
P PP N + PQ P PP + P P R + P P P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 615 XSXHXPXPHXXXXXXQNTPXTP 680
P +TP P
Sbjct: 397 GRSAPALPPLGNASRTSTPPVP 418
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 7.1
Identities = 19/78 (24%), Positives = 23/78 (29%), Gaps = 3/78 (3%)
Frame = +1
Query: 439 AXPPPPXXPTTXXXPADXNPKXP---QKXAQHPXXPRPQNXPXSPANXTPXPXXXXPHQP 609
A PPPP T P + P Q +P P P + A+ P P
Sbjct: 924 ASPPPPKVGETYHPPTASGTRVPPVQQPSHPNPYTPVAPQSPVAAASRISSSPNMPPSNP 983
Query: 610 XPXAXTXPXPTXPAXTXK 663
PA T K
Sbjct: 984 YTPIAVASSTVNPAHTYK 1001
Score = 25.8 bits (54), Expect = 9.3
Identities = 20/79 (25%), Positives = 23/79 (29%), Gaps = 1/79 (1%)
Frame = +1
Query: 445 PPPPXXPTTXXXPADXNPKXPQKXAQHPXXPRPQNXPXSPANXTPXPXXXXPHQP-XPXA 621
PPPP T PA +P P K + P P P P P P A
Sbjct: 909 PPPPTASMTASAPAIASP-PPPKVGETYHPPTASGTRVPPVQQPSHPNPYTPVAPQSPVA 967
Query: 622 XTXPXPTXPAXTXKTPPXP 678
+ P P P
Sbjct: 968 AASRISSSPNMPPSNPYTP 986
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.139 0.483
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,450,680
Number of Sequences: 5004
Number of extensions: 15026
Number of successful extensions: 66
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 505288058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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