Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_H02
         (982 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    25   1.4  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    25   1.4  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    22   7.4  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 521 WAXFWGFLGFXSA 483
           W  +WG LGF SA
Sbjct: 336 WNSYWGILGFPSA 348


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 521 WAXFWGFLGFXSA 483
           W  +WG LGF SA
Sbjct: 336 WNSYWGILGFPSA 348


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +3

Query: 462 PHNPXXTRGXEPQKXPEXXPTPPXTPP 542
           P++    +    ++  E  P PP TPP
Sbjct: 24  PNSGELFKAGSAEQPKEQEPLPPVTPP 50


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.313    0.139    0.483 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,481
Number of Sequences: 438
Number of extensions: 2380
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 32411652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)