Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_G23
         (817 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown prot...    60   3e-09
X17551-2|CAA35587.1|  888|Drosophila melanogaster protein ( D.me...    54   2e-07
AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p pro...    54   2e-07
M22874-2|AAA28675.1|  916|Drosophila melanogaster protein ( D.me...    52   7e-07
AY089343-1|AAL90081.2|  718|Drosophila melanogaster AT16518p pro...    52   7e-07
AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p pro...    45   1e-04
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ...    40   0.004
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ...    40   0.004
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ...    40   0.004
AM040243-1|CAJ13339.1|  656|Drosophila melanogaster pol protein ...    40   0.005
M17214-2|AAA28508.1|  858|Drosophila melanogaster protein ( D.me...    37   0.038
AY058505-1|AAL13734.1|  422|Drosophila melanogaster LD21309p pro...    31   1.9  
AF325529-1|AAK01218.1|  422|Drosophila melanogaster elongation i...    31   1.9  
AE014297-297|AAN13249.1|  422|Drosophila melanogaster CG2922-PG,...    31   1.9  
AE014297-296|AAN13248.1|  422|Drosophila melanogaster CG2922-PF,...    31   1.9  
AE014297-295|AAN13247.1|  422|Drosophila melanogaster CG2922-PE,...    31   1.9  
AE014297-294|AAN13246.1|  422|Drosophila melanogaster CG2922-PD,...    31   1.9  
AE014297-293|AAF51995.1|  422|Drosophila melanogaster CG2922-PC,...    31   1.9  
AE014297-292|AAG22214.1|  422|Drosophila melanogaster CG2922-PB,...    31   1.9  
AE014297-291|AAF51996.1|  422|Drosophila melanogaster CG2922-PA,...    31   1.9  
AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.      30   4.4  
AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse tran...    30   4.4  
AY118395-1|AAM48424.1|  268|Drosophila melanogaster RE53819p pro...    29   7.6  
AE014296-1702|AAF50232.1|  268|Drosophila melanogaster CG18179-P...    29   7.6  

>AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown protein.
          Length = 908

 Score = 60.5 bits (140), Expect = 3e-09
 Identities = 32/89 (35%), Positives = 47/89 (52%)
 Frame = -2

Query: 576  HLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI 397
            H+K  Q IQ++  R+  G  WFVRN  LH DL L ++   +   S R+ D+  RH N L 
Sbjct: 817  HIKRIQAIQNKVARLITGCEWFVRNTTLHRDLKLATVFDEINKHSSRYHDRLERHRNRLA 876

Query: 396  VAAGNYIPDPADRMESSRRRPKHVISDPP 310
             A       P  R+  +RR+P+ +I+  P
Sbjct: 877  SALNR--SRPPRRL--NRRQPRDLITRSP 901


>X17551-2|CAA35587.1|  888|Drosophila melanogaster protein (
            D.melanogaster white-one mutant DNA with Doc retroposon,
            inserted inwhite locuspromoter region.  ).
          Length = 888

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 22/67 (32%), Positives = 40/67 (59%)
 Frame = -2

Query: 600  MFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKA 421
            ++ +A+R ++   Q  QSR  RI  GAPW++RN ++H DL ++ + + +     ++ +K 
Sbjct: 800  LWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKL 859

Query: 420  ARHENPL 400
              H NPL
Sbjct: 860  TTHTNPL 866


>AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p protein.
          Length = 888

 Score = 54.0 bits (124), Expect = 2e-07
 Identities = 22/67 (32%), Positives = 40/67 (59%)
 Frame = -2

Query: 600  MFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKA 421
            ++ +A+R ++   Q  QSR  RI  GAPW++RN ++H DL ++ + + +     ++ +K 
Sbjct: 800  LWGNASRSNIDIIQRAQSRILRIITGAPWYLRNENIHRDLKIKLVIEVIAEKKTKYNEKL 859

Query: 420  ARHENPL 400
              H NPL
Sbjct: 860  TTHTNPL 866


>M22874-2|AAA28675.1|  916|Drosophila melanogaster protein (
            D.melanogaster LINEelement J-1, clone J-1. ).
          Length = 916

 Score = 52.4 bits (120), Expect = 7e-07
 Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
 Frame = -2

Query: 600  MFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKA 421
            ++  AA+ HL   +I+Q++  R   GAPW++R  D+  DL +  +   LQ+ + ++ ++ 
Sbjct: 814  VYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYMERL 873

Query: 420  ARHENPLIVAAGNYIPDPAD-RMESSRRRPKHVISDPPD 307
              H N L    G      AD R    RR  +H   D P+
Sbjct: 874  NVHPNSLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPN 912


>AY089343-1|AAL90081.2|  718|Drosophila melanogaster AT16518p
           protein.
          Length = 718

 Score = 52.4 bits (120), Expect = 7e-07
 Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
 Frame = -2

Query: 600 MFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKA 421
           ++  AA+ HL   +I+Q++  R   GAPW++R  D+  DL +  +   LQ+ + ++ ++ 
Sbjct: 616 VYGIAAKSHLNKIRILQAKTLRRISGAPWYMRTRDIERDLKVPKLGDKLQNIAQKYLERL 675

Query: 420 ARHENPLIVAAGNYIPDPAD-RMESSRRRPKHVISDPPD 307
             H N L    G      AD R    RR  +H   D P+
Sbjct: 676 NVHPNSLARKLGTAAVVNADPRTRVKRRLKRHHPHDLPN 714


>AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p protein.
          Length = 906

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 19/63 (30%), Positives = 35/63 (55%)
 Frame = -2

Query: 588  AARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHE 409
            AA+ +    Q++Q+R  R     P++VR   LH DL+L ++ + +   + R+ D+  RH 
Sbjct: 819  AAKSNYNRIQVLQNRAMRAITDCPYYVRGTTLHRDLNLHTVEEQISRHTSRYSDRLRRHH 878

Query: 408  NPL 400
            + L
Sbjct: 879  SIL 881


>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
            protein.
          Length = 1103

 Score = 39.9 bits (89), Expect = 0.004
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
 Frame = -2

Query: 570  KSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI-- 397
            K  Q +++++ R  + A  + R  D+    +++S  +    AS R+ +    HENPLI  
Sbjct: 883  KKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYD 942

Query: 396  VAAGNYIPDPADRMESSRRR 337
            +    Y P   +R+E S+ R
Sbjct: 943  LLINAYKP---NRLELSKNR 959


>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
            protein.
          Length = 1103

 Score = 39.9 bits (89), Expect = 0.004
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
 Frame = -2

Query: 570  KSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI-- 397
            K  Q +++++ R  + A  + R  D+    +++S  +    AS R+ +    HENPLI  
Sbjct: 883  KKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYD 942

Query: 396  VAAGNYIPDPADRMESSRRR 337
            +    Y P   +R+E S+ R
Sbjct: 943  LLINAYKP---NRLELSKNR 959


>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
            protein.
          Length = 1103

 Score = 39.9 bits (89), Expect = 0.004
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
 Frame = -2

Query: 570  KSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI-- 397
            K  Q +++++ R  + A  + R  D+    +++S  +    AS R+ +    HENPLI  
Sbjct: 883  KKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDEIFDKASQRYANSLTDHENPLIYD 942

Query: 396  VAAGNYIPDPADRMESSRRR 337
            +    Y P   +R+E S+ R
Sbjct: 943  LLINAYKP---NRLELSKNR 959


>AM040243-1|CAJ13339.1|  656|Drosophila melanogaster pol protein
           protein.
          Length = 656

 Score = 39.5 bits (88), Expect = 0.005
 Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
 Frame = -2

Query: 570 KSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQSASMRHFDKAARHENPLI-- 397
           K  Q +++++ R  + A  + R  D+    +++S  +    AS R+ +    HENPLI  
Sbjct: 436 KKIQTMENKYIRRIINASRYTRQADIRTKYNIKSFDETFDKASQRYANSLTDHENPLIYD 495

Query: 396 VAAGNYIPDPADRMESSRRR 337
           +    Y P   +R+E S+ R
Sbjct: 496 LLINAYKP---NRLELSKNR 512


>M17214-2|AAA28508.1|  858|Drosophila melanogaster protein (
           D.melanogaster Fw repetitiveelement putative reverse
           transcriptase, complete cds,and putative binding
           protein, 3' end. ).
          Length = 858

 Score = 36.7 bits (81), Expect = 0.038
 Identities = 14/46 (30%), Positives = 29/46 (63%)
 Frame = -2

Query: 600 MFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESIS 463
           ++ +A+  ++   Q  QS+  R   GAPW+VR+ ++  DL++ S++
Sbjct: 802 LWGNASNSNIDIIQRAQSKILRTITGAPWYVRSENIQRDLNIPSVT 847


>AY058505-1|AAL13734.1|  422|Drosophila melanogaster LD21309p
           protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -2

Query: 480 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 304
           DLE ISKYL SA  +  + +       +++A G  +P  +   +  + R  + I D P+ 
Sbjct: 45  DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104

Query: 303 L 301
           +
Sbjct: 105 M 105


>AF325529-1|AAK01218.1|  422|Drosophila melanogaster elongation
           initiation factor 5C protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -2

Query: 480 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 304
           DLE ISKYL SA  +  + +       +++A G  +P  +   +  + R  + I D P+ 
Sbjct: 45  DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104

Query: 303 L 301
           +
Sbjct: 105 M 105


>AE014297-297|AAN13249.1|  422|Drosophila melanogaster CG2922-PG,
           isoform G protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -2

Query: 480 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 304
           DLE ISKYL SA  +  + +       +++A G  +P  +   +  + R  + I D P+ 
Sbjct: 45  DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104

Query: 303 L 301
           +
Sbjct: 105 M 105


>AE014297-296|AAN13248.1|  422|Drosophila melanogaster CG2922-PF,
           isoform F protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -2

Query: 480 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 304
           DLE ISKYL SA  +  + +       +++A G  +P  +   +  + R  + I D P+ 
Sbjct: 45  DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104

Query: 303 L 301
           +
Sbjct: 105 M 105


>AE014297-295|AAN13247.1|  422|Drosophila melanogaster CG2922-PE,
           isoform E protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -2

Query: 480 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 304
           DLE ISKYL SA  +  + +       +++A G  +P  +   +  + R  + I D P+ 
Sbjct: 45  DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104

Query: 303 L 301
           +
Sbjct: 105 M 105


>AE014297-294|AAN13246.1|  422|Drosophila melanogaster CG2922-PD,
           isoform D protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -2

Query: 480 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 304
           DLE ISKYL SA  +  + +       +++A G  +P  +   +  + R  + I D P+ 
Sbjct: 45  DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104

Query: 303 L 301
           +
Sbjct: 105 M 105


>AE014297-293|AAF51995.1|  422|Drosophila melanogaster CG2922-PC,
           isoform C protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -2

Query: 480 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 304
           DLE ISKYL SA  +  + +       +++A G  +P  +   +  + R  + I D P+ 
Sbjct: 45  DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104

Query: 303 L 301
           +
Sbjct: 105 M 105


>AE014297-292|AAG22214.1|  422|Drosophila melanogaster CG2922-PB,
           isoform B protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -2

Query: 480 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 304
           DLE ISKYL SA  +  + +       +++A G  +P  +   +  + R  + I D P+ 
Sbjct: 45  DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104

Query: 303 L 301
           +
Sbjct: 105 M 105


>AE014297-291|AAF51996.1|  422|Drosophila melanogaster CG2922-PA,
           isoform A protein.
          Length = 422

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -2

Query: 480 DLESISKYLQSASMR-HFDKAARHENPLIVAAGNYIPDPADRMESSRRRPKHVISDPPDP 304
           DLE ISKYL SA  +  + +       +++A G  +P  +   +  + R  + I D P+ 
Sbjct: 45  DLEQISKYLDSAGNKLDYRRYGEVLFDILIAGGLLVPGGSISQDGEKPRTSYCIFDAPES 104

Query: 303 L 301
           +
Sbjct: 105 M 105


>AY180919-1|AAN87272.1|  884|Drosophila melanogaster ORF1 protein.
          Length = 884

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 10/50 (20%), Positives = 26/50 (52%)
 Frame = -2

Query: 600 MFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQ 451
           ++   A+ H+K  QI Q++  ++ +  P++     LH    ++ + + +Q
Sbjct: 834 VWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQKIQ 883


>AF456125-1|AAL57609.1|  832|Drosophila melanogaster reverse
           transcriptase protein.
          Length = 832

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 10/50 (20%), Positives = 26/50 (52%)
 Frame = -2

Query: 600 MFAHAARIHLKSFQIIQSRFCRIAVGAPWFVRNVDLHDDLDLESISKYLQ 451
           ++   A+ H+K  QI Q++  ++ +  P++     LH    ++ + + +Q
Sbjct: 782 VWGRCAQTHIKKLQICQNKLLKLIMNLPYYTNTKYLHIKAGVQKVQQKIQ 831


>AY118395-1|AAM48424.1|  268|Drosophila melanogaster RE53819p
           protein.
          Length = 268

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -1

Query: 325 HLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLS 173
           H GS+   NGAFR    R  F S+P+   +G      +R   + F+ DL++
Sbjct: 95  HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRDIGLIRTPSVGFT-DLIN 144


>AE014296-1702|AAF50232.1|  268|Drosophila melanogaster CG18179-PA
           protein.
          Length = 268

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = -1

Query: 325 HLGSS*STNGAFRYFKHRSPFSSNPSLATKGSTSKLTLRHSPLSFSPDLLS 173
           H GS+   NGAFR    R  F S+P+   +G      +R   + F+ DL++
Sbjct: 95  HYGSNWGWNGAFRQSVRRDNFISHPNWPAEGGRDIGLIRTPSVGFT-DLIN 144


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,384,005
Number of Sequences: 53049
Number of extensions: 545275
Number of successful extensions: 1563
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1563
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)