Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_G20
(829 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.004
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.009
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.037
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.15
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.20
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 30 0.46
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 0.61
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.1
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 28 1.9
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 2.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.2
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 5.7
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 26 7.5
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.7 bits (81), Expect = 0.004
Identities = 32/126 (25%), Positives = 34/126 (26%), Gaps = 4/126 (3%)
Frame = +2
Query: 398 PXPXXXXPXPXXXPPXXPXPXXP--PGGXXPXXPGGPXXAXPXX--PXXXXXPPXPXAXX 565
P P P PP P P PG A P PP P
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPS 422
Query: 566 XXXXPPPDXPPXSPPXXXXXXPPPPXXPXFRXLRXXXXXXRGXPXXXALPPXPXXPWXPP 745
PP PP +PP P P P + G P LPP P PP
Sbjct: 423 LPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPI--APPLPAGMPAAPPLPPAAPAP--PP 478
Query: 746 XXXXPP 763
P
Sbjct: 479 APAPAP 484
Score = 33.1 bits (72), Expect = 0.049
Identities = 24/67 (35%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Frame = +1
Query: 580 PXXXPPXLPPXXXXXGPPPPXPSXLPXASXAARXPXRXPRPGSXPXXPXXP-XXPXXXXX 756
P PP LPP PP PS LP + AA P P S P P P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPS-LPMGAPAA-----PPLPPSAPIAPPLPAGMPAAPPL 469
Query: 757 SPTXPPP 777
P P P
Sbjct: 470 PPAAPAP 476
Score = 32.3 bits (70), Expect = 0.086
Identities = 33/136 (24%), Positives = 37/136 (27%), Gaps = 16/136 (11%)
Frame = +3
Query: 336 KNPPXPPXGXGSXXXPXXTXTXPPXXXXR-------RXXSXPPXXPXRGXPPGG------ 476
+N PP G GS PP + S PP P R P G
Sbjct: 320 RNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPL 379
Query: 477 ---XXXXXPXXPPXXXLXPRPXPXXPPXXQPRXXRXRPXXTPPXXPPXXAXXXXPPPXXX 647
P PP + R P PP P TPP PP P
Sbjct: 380 SSSRAVSNPPAPP-PAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPS 438
Query: 648 XPSGGFACXXXSXAXP 695
P G A + P
Sbjct: 439 LPMGAPAAPPLPPSAP 454
Score = 31.1 bits (67), Expect = 0.20
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = +1
Query: 244 PPPPXPLXXX*KTPXXLGXGAPPFLXXGGGXKTPPXPPXGGXPPXXPXXXXPXP 405
PP P P P L APP L G PP PP P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPM-GAPAAPPLPPSAPIAPPLPAGMPAAP 467
Score = 30.7 bits (66), Expect = 0.26
Identities = 19/69 (27%), Positives = 20/69 (28%), Gaps = 3/69 (4%)
Frame = +2
Query: 437 PPXXPXPXXPPGGXXPXXPGG---PXXAXPXXPXXXXXPPXPXAXXXXXXPPPDXPPXSP 607
PP P P G P P G P P P P + PP PP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 608 PXXXXXXPP 634
PP
Sbjct: 397 GRSAPALPP 405
Score = 30.3 bits (65), Expect = 0.35
Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Frame = +1
Query: 592 PPXLPPXXXXXGPPPPXPSXLPXASXAARXPXRXPRPGSXPXXPXXPXXPXXXXXS--PT 765
PP L PP P P+ +P S A P S P P P P S P+
Sbjct: 376 PPPLSSSRAVSNPPAPPPA-IPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPS 434
Query: 766 XPP 774
PP
Sbjct: 435 APP 437
Score = 30.3 bits (65), Expect = 0.35
Identities = 16/63 (25%), Positives = 20/63 (31%)
Frame = +1
Query: 604 PPXXXXXGPPPPXPSXLPXASXAARXPXRXPRPGSXPXXPXXPXXPXXXXXSPTXPPPXX 783
PP PP P LP ++ + P P P P P +P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 784 XXP 792
P
Sbjct: 475 APP 477
Score = 28.3 bits (60), Expect = 1.4
Identities = 27/114 (23%), Positives = 31/114 (27%), Gaps = 4/114 (3%)
Frame = +2
Query: 404 PXXXXPXPXXXPPXXPXPXXPPGGXXPXXPGGPXXAXPXXPXXXXXP----PXPXAXXXX 571
P P P P PP P G + P P P P +
Sbjct: 234 PSIPSSRPPERVPSLSAPAPPP---IPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKP 290
Query: 572 XXPPPDXPPXSPPXXXXXXPPPPXXPXFRXLRXXXXXXRGXPXXXALPPXPXXP 733
PPP + PPP P R R G +LPP P P
Sbjct: 291 PLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNG-SSNSSLPPPPPPP 343
Score = 26.6 bits (56), Expect = 4.3
Identities = 19/74 (25%), Positives = 23/74 (31%)
Frame = +1
Query: 136 KDRVXXGXKXLNXAXXPXPPXXXXXXXXPXXKXGGXPPPPXPLXXX*KTPXXLGXGAPPF 315
K + G + P PP P G PPP P ++ G PP
Sbjct: 324 KPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP----RSAPSTGRQPPP- 378
Query: 316 LXXGGGXKTPPXPP 357
L PP PP
Sbjct: 379 LSSSRAVSNPPAPP 392
Score = 25.8 bits (54), Expect = 7.5
Identities = 19/76 (25%), Positives = 19/76 (25%), Gaps = 8/76 (10%)
Frame = +2
Query: 437 PPXXPXPXXPPGGXXPXXPGGPXXAXPXXPXXXXXPPXPXAXXXXXXPPPDXPPXS---- 604
PP P P P PP PPP PP S
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAG 349
Query: 605 ----PPXXXXXXPPPP 640
PP PPPP
Sbjct: 350 SIPLPPQGRSAPPPPP 365
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.5 bits (78), Expect = 0.009
Identities = 41/159 (25%), Positives = 45/159 (28%), Gaps = 4/159 (2%)
Frame = +3
Query: 342 PPXPPXGXGSXXXPXXTXTXPPXXXXRRXXSXPPXXPXRGX--PPGGXXXXXPXXPPXXX 515
PP P + P T T P S PP P P P P
Sbjct: 1032 PPIPVPST-APPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSG 1090
Query: 516 LXPRPXPXX--PPXXQPRXXRXRPXXTPPXXPPXXAXXXXPPPXXXXPSGGFACXXXSXA 689
+ P P P PP +P P P PP PP PSG S A
Sbjct: 1091 IPPVPKPSVAAPPVPKPSVA-VPPVPAPSGAPPVPKPSVAAPPVP-VPSGAPPVPKPSVA 1148
Query: 690 XPPXXXXSXXXXGSXGAXPXXGXPHXXAASXRXPXIPXP 806
PP S P P A S P +P P
Sbjct: 1149 APPVPAPS---GAPPVPKPSVAAPPVPAPSSGIPPVPKP 1184
Score = 33.9 bits (74), Expect = 0.028
Identities = 23/83 (27%), Positives = 24/83 (28%), Gaps = 2/83 (2%)
Frame = +2
Query: 398 PXPXXXXPXPXXXPPXXPXPXXPPGGXXPXXPGGPXXAXPXXPXXXXXPPXPX--AXXXX 571
P P P P P P G P P A P PP P A
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPV-PKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 572 XXPPPDXPPXSPPXXXXXXPPPP 640
PP + PP P PPP
Sbjct: 1191 VPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 32.3 bits (70), Expect = 0.086
Identities = 21/87 (24%), Positives = 21/87 (24%), Gaps = 2/87 (2%)
Frame = +2
Query: 383 PXXXXPXPXXXXPXPXXXPPXXPXPXXPPGGXXPXXPGGPXXAXPXXPXXXXXPPXPXAX 562
P P P P P P P P P P PP P
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPS 1195
Query: 563 XXXXXPPPD--XPPXSPPXXXXXXPPP 637
P P PP PP P P
Sbjct: 1196 EAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 32.3 bits (70), Expect = 0.086
Identities = 21/81 (25%), Positives = 22/81 (27%), Gaps = 1/81 (1%)
Frame = +2
Query: 398 PXPXXXXPXPXXXPPXXPXPXXPPGGXXPXXPGGPXXAXPXXPXXXXXPPXPX-AXXXXX 574
P P P P P P P P P P P PP P +
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK-PAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 575 XPPPDXPPXSPPXXXXXXPPP 637
PPP P P P P
Sbjct: 1210 VPPPSTAPPVPTPSAGLPPVP 1230
Score = 31.9 bits (69), Expect = 0.11
Identities = 23/84 (27%), Positives = 23/84 (27%), Gaps = 3/84 (3%)
Frame = +2
Query: 398 PXPXXXXPXPXXXPPXXPXPXXPPGGXXPXXPGGPXXAXPXXPXXXXXPPXP---XAXXX 568
P P P P P P G P P A P P PP P A
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPK--PSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Query: 569 XXXPPPDXPPXSPPXXXXXXPPPP 640
P PP P PPP
Sbjct: 1171 VPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 29.1 bits (62), Expect = 0.80
Identities = 22/83 (26%), Positives = 23/83 (27%)
Frame = +1
Query: 544 PXPXSXEXXXXAPXXXPPXLPPXXXXXGPPPPXPSXLPXASXAARXPXRXPRPGSXPXXP 723
P P P PP P PP P PS P + P P S
Sbjct: 1124 PKPSVAAPPVPVPSGAPPV--PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSS----- 1176
Query: 724 XXPXXPXXXXXSPTXPPPXXXXP 792
P P P PPP P
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 29.1 bits (62), Expect = 0.80
Identities = 22/87 (25%), Positives = 22/87 (25%), Gaps = 1/87 (1%)
Frame = +2
Query: 383 PXXXXPXPXXXXPXPXXXPPXXPXPXXP-PGGXXPXXPGGPXXAXPXXPXXXXXPPXPXA 559
P P P P P P P P P P P A P PP P
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP-PSEAPPVPKPSVGVPPVPPP 1213
Query: 560 XXXXXXPPPDXPPXSPPXXXXXXPPPP 640
P P P PP P
Sbjct: 1214 STAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 28.3 bits (60), Expect = 1.4
Identities = 43/209 (20%), Positives = 48/209 (22%), Gaps = 8/209 (3%)
Frame = +1
Query: 190 PPXXXXXXXXPXXKXG-GXP--PPPXPLXXX*KTPXXLGXGAPPFLXXGGGXKTPPXPPX 360
PP P K G P PPP P GAPP + G P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPP-VPAPSGIPPVPKPSV 1099
Query: 361 GGXP-PXXPXXXXPXPXXXXTXAXXXXXXXXXXXXXXXXXXXXXTRXXXRXXXXXPXXXR 537
P P P P P
Sbjct: 1100 AAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAP 1159
Query: 538 XXPXPXSXEXXXXAPXXXPPXLPPXXXXXGPPPPXPSXLPXASXAARXPXRXPRPGSXPX 717
P P AP P +P P PP P + P P P + P
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP-VPPPSTAPP 1218
Query: 718 XP----XXPXXPXXXXXSPTXPPPXXXXP 792
P P P +P P P P
Sbjct: 1219 VPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 28.3 bits (60), Expect = 1.4
Identities = 27/119 (22%), Positives = 31/119 (26%), Gaps = 1/119 (0%)
Frame = +3
Query: 345 PXPPXGXGSXXXPXXTXTXPPXXXXRRXXSXPPXXPXRGXPPGGXXXXXPXXP-PXXXLX 521
P P G+ P + PP + P P PP P P P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPS--GAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAP 1169
Query: 522 PRPXPXXPPXXQPRXXRXRPXXTPPXXPPXXAXXXXPPPXXXXPSGGFACXXXSXAXPP 698
P P P P+ P PP P P PS S PP
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 27.5 bits (58), Expect = 2.5
Identities = 27/111 (24%), Positives = 31/111 (27%), Gaps = 6/111 (5%)
Frame = +3
Query: 342 PPXPPXGXGSXXXPXXTXTXPPXXXXRRXXSXPPXXPXRGXPP-GGXXXXXPXXPPXXXL 518
PP P + P + P + P P G PP P PP
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPS--VAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEA 1197
Query: 519 XPRPXP--XXPPXXQPRXXRXRPXXT---PPXXPPXXAXXXXPPPXXXXPS 656
P P P PP P P + PP P P P PS
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPS 1248
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.5 bits (73), Expect = 0.037
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = +1
Query: 628 PPPPXPSXLPXASXAARXPXRXPRP--GSXPXXPXXPXXPXXXXXSPTXPPP 777
PPPP P+ + A P P P G P P P P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.1 bits (72), Expect = 0.049
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = +1
Query: 244 PPPPXPLXXX*KTPXXLGXGAPPFLXXGGGXKTPPXPP--XGGXPPXXP 384
PPPP P TP PP GG PP PP G PP P
Sbjct: 732 PPPPPPAVIV-PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 32.3 bits (70), Expect = 0.086
Identities = 17/57 (29%), Positives = 18/57 (31%)
Frame = +3
Query: 492 PXXPPXXXLXPRPXPXXPPXXQPRXXRXRPXXTPPXXPPXXAXXXXPPPXXXXPSGG 662
P PP + P P P P P P PP A PPP S G
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 31.5 bits (68), Expect = 0.15
Identities = 15/51 (29%), Positives = 15/51 (29%)
Frame = +2
Query: 455 PXXPPGGXXPXXPGGPXXAXPXXPXXXXXPPXPXAXXXXXXPPPDXPPXSP 607
P PP P P P P PP P PP PP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.35
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +1
Query: 592 PPXLPPXXXXXGPPPPXPSXLPXASXAARXPXRXPRPGSXP 714
PP PP GPPPP P P A A P P + P
Sbjct: 763 PPPPPPGVAGAGPPPPPPP--PPAVSAGGSRYYAPAPQAEP 801
Score = 29.9 bits (64), Expect = 0.46
Identities = 20/72 (27%), Positives = 20/72 (27%)
Frame = +2
Query: 425 PXXXPPXXPXPXXPPGGXXPXXPGGPXXAXPXXPXXXXXPPXPXAXXXXXXPPPDXPPXS 604
P PP P P P P P P P PP P PPP PP
Sbjct: 732 PPPPPPAVIVPTPAPA-PIPVPPPAPIMGGPPPP-----PPPPGVAGAGPPPPPPPPPAV 785
Query: 605 PPXXXXXXPPPP 640
P P
Sbjct: 786 SAGGSRYYAPAP 797
Score = 29.1 bits (62), Expect = 0.80
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +1
Query: 544 PXPXSXEXXXXAPXXXPPXLPPXXXXXGPPPPXPSXLPXASXAARXPXRXPRP 702
P P P P +PP G PPP P P + A P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP-PGVAGAGPPPPPPPPP 783
Score = 27.5 bits (58), Expect = 2.5
Identities = 20/68 (29%), Positives = 20/68 (29%), Gaps = 1/68 (1%)
Frame = +2
Query: 398 PXPXXXXPXPXXXPPXXPXPXXPPGGXXPXXPGGPXXAXPXXPXXXXXPPXPXA-XXXXX 574
P P P P P P P GG P P P A P PP A
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP-PPGVAGAGPPPPPPPPPAVSAGGSRYY 793
Query: 575 XPPPDXPP 598
P P P
Sbjct: 794 APAPQAEP 801
Score = 26.2 bits (55), Expect = 5.7
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +1
Query: 592 PPXLPPXXXXXGPPPPXPSXLPXASXAARXPXRXPRPGSXPXXPXXPXXP 741
PP PP P P P A P P PG P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 26.2 bits (55), Expect = 5.7
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +1
Query: 184 PXPPXXXXXXXXPXXKXGGXPPPPXPLXXX*KTPXXLGXGAPP 312
P P P GG PPPP P P G G PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPP-------PGVAGAGPPP 777
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.5 bits (68), Expect = 0.15
Identities = 20/66 (30%), Positives = 20/66 (30%)
Frame = -2
Query: 648 GXXGGGGXXXXXXGGEXGGXSGGGXXXXLXAXGXGGXXXXXGXXGXAXXGPPGXXGXXPP 469
G GG G GG G G G GG G G GP G G
Sbjct: 208 GGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Query: 468 GGXXGW 451
G GW
Sbjct: 268 HGGPGW 273
Score = 27.9 bits (59), Expect = 1.9
Identities = 21/68 (30%), Positives = 23/68 (33%)
Frame = -2
Query: 585 GGGXXXXLXAXGXGGXXXXXGXXGXAXXGPPGXXGXXPPGGXXGWGXXGGXXXGXGXXXX 406
GG L + G G G G G G PPG G+G GG G G
Sbjct: 164 GGLALGGLASHALGNLFHHRGHNGGGFGGFGGGSGGPPPG-PGGFGGFGG-FGGEGHHHG 221
Query: 405 GXGXXXXG 382
G G G
Sbjct: 222 GHGGFGGG 229
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.1 bits (67), Expect = 0.20
Identities = 21/79 (26%), Positives = 24/79 (30%), Gaps = 8/79 (10%)
Frame = +2
Query: 437 PPXXPXPXXPPGGXXPXXPGGPXXAXP------XXPXXXXXPPXPXAXXXXXXP--PPDX 592
PP P P P P P + P P PP P + P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 593 PPXSPPXXXXXXPPPPXXP 649
PP +P P PP P
Sbjct: 184 PPSAPSLPSAVPPMPPKVP 202
Score = 29.5 bits (63), Expect = 0.61
Identities = 19/78 (24%), Positives = 23/78 (29%)
Frame = +1
Query: 544 PXPXSXEXXXXAPXXXPPXLPPXXXXXGPPPPXPSXLPXASXAARXPXRXPRPGSXPXXP 723
P P + + P PP PP PS P + P + P P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP--P 185
Query: 724 XXPXXPXXXXXSPTXPPP 777
P P P PP
Sbjct: 186 SAPSLPSAVPPMPPKVPP 203
Score = 28.7 bits (61), Expect = 1.1
Identities = 25/109 (22%), Positives = 26/109 (23%)
Frame = +3
Query: 369 SXXXPXXTXTXPPXXXXRRXXSXPPXXPXRGXPPGGXXXXXPXXPPXXXLXPRPXPXXPP 548
S P P R S PP P PP P P P
Sbjct: 121 SAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Query: 549 XXQPRXXRXRPXXTPPXXPPXXAXXXXPPPXXXXPSGGFACXXXSXAXP 695
P P PP P PPP P + S A P
Sbjct: 181 VKSPPSAPSLPSAVPPMPP-----KVPPPPLSQAPVANTSSRPSSFAPP 224
Score = 26.2 bits (55), Expect = 5.7
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Frame = +1
Query: 592 PPXLPPXXXXXGPPPPXPSXLPXASXAARXPXRXPRPGSXPXXP--XXPXXPXXXXXSPT 765
P PP PPP S P S A P P P + P P P P P
Sbjct: 140 PTSAPPRPSI--PPPSPASAPPIPSKAPPIPSSLP-PPAQPAAPVKSPPSAPSLPSAVPP 196
Query: 766 XPPPXXXXP 792
PP P
Sbjct: 197 MPPKVPPPP 205
Score = 25.8 bits (54), Expect = 7.5
Identities = 24/95 (25%), Positives = 27/95 (28%)
Frame = +3
Query: 246 PPPKXPXXXVKNPPXFGGGXPXLFXXGGGXKNPPXPPXGXGSXXXPXXTXTXPPXXXXRR 425
PPP P VK+PP P PP + + PP
Sbjct: 172 PPPAQPAAPVKSPPS-APSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPN 230
Query: 426 XXSXPPXXPXRGXPPGGXXXXXPXXPPXXXLXPRP 530
S P P RG P P P L RP
Sbjct: 231 VTSESPKFPNRG-PSIPSASVPPVPPSSYVLQQRP 264
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.9 bits (64), Expect = 0.46
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -2
Query: 285 GGFSPXXKGXWGGGXPPXFXXGXXXGXXGXXRXGGXG 175
GGF +G +GGG F G G G R G G
Sbjct: 152 GGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRG 188
Score = 26.2 bits (55), Expect = 5.7
Identities = 17/57 (29%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Frame = -2
Query: 744 GGXXGXXGXGGXAXXXGXPRXXXXXXRSXRKXGXXGG--GGXXXXXXGGEXGGXSGG 580
G G G GG G + G GG GG GG GG GG
Sbjct: 129 GARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGG 185
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.5 bits (63), Expect = 0.61
Identities = 26/120 (21%), Positives = 28/120 (23%), Gaps = 1/120 (0%)
Frame = +2
Query: 419 PXPXXXPPXXPXPXXPPGGXXPXXPGGPXX-AXPXXPXXXXXPPXPXAXXXXXXPPPDXP 595
P P P P P P P A P P P P A P P
Sbjct: 533 PAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQP 592
Query: 596 PXSPPXXXXXXPPPPXXPXFRXLRXXXXXXRGXPXXXALPPXPXXPWXPPXXXXPPXXRR 775
P +P P P P P P P P P +R
Sbjct: 593 PVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQR 652
Score = 27.5 bits (58), Expect = 2.5
Identities = 21/82 (25%), Positives = 22/82 (26%), Gaps = 5/82 (6%)
Frame = +2
Query: 419 PXPXXXPPXXPXPXXPPGGXXPXXPGGPXX----AXPXXPXXXXXPPXPXAXXXXXXPPP 586
P P P P P P P P A P P P P P
Sbjct: 605 PQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSV 664
Query: 587 DXPPXSP-PXXXXXXPPPPXXP 649
PP +P P PP P
Sbjct: 665 PQPPAAPVVPEVPSVPQPPAVP 686
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 1.1
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = +2
Query: 425 PXXXPPXXPXPXXPPGGXXPXXPGGPXXAXPXXPXXXXXPPXPXAXXXXXXPPPDXPPXS 604
P PP P PP P P P PP P A PP PP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPP----------PPPMSVPPPPSAPPMPAGPPSAPPPPL 1735
Query: 605 PPXXXXXXPPP 637
P P P
Sbjct: 1736 PASSAPSVPNP 1746
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.9 bits (59), Expect = 1.9
Identities = 19/72 (26%), Positives = 19/72 (26%), Gaps = 2/72 (2%)
Frame = +2
Query: 425 PXXXPPXXPXPXXPPGGXXPXXPGGPXXAXPXXPXXXXXPPXPXAXXXXXXPPPDXP--P 598
P P P PPG P PG P PP P P P P
Sbjct: 487 PGTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVP 546
Query: 599 XSPPXXXXXXPP 634
P PP
Sbjct: 547 AMPGIPGATAPP 558
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 578 PPPDXPPXSPPXXXXXXPPPP 640
PPP PP P PPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 4.3
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 404 PXXXXPXPXXXPPXXPXPXXPPG 472
P P P PP P P PPG
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPG 31
Score = 25.8 bits (54), Expect = 7.5
Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Frame = +2
Query: 578 PPPDXPPXSPP--XXXXXXPPPPXXPXF 655
PP + PP PP PPPP P +
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGY 32
Score = 25.4 bits (53), Expect = 9.9
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +1
Query: 331 GXKTPPXPPXGGXPPXXPXXXXP 399
G PP PP G PP P P
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPP 29
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 3.2
Identities = 28/117 (23%), Positives = 31/117 (26%), Gaps = 8/117 (6%)
Frame = +2
Query: 419 PXPXXXPPXXPXPXXP-PGGXXPXXPGGPXXAXPXXPXXXXXPPXPXAXXXXXXP--PPD 589
P P PP P P P P P A P + P PP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPT 226
Query: 590 XPPX-SPPXXXXXXPPPPXXP----XFRXLRXXXXXXRGXPXXXALPPXPXXPWXPP 745
P + P PPPP P L +PP P P PP
Sbjct: 227 YTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPP 283
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +1
Query: 628 PPPPXPSXLPXASXAARXPXRXPRPGSXP 714
PPPP P LP A + P P P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 25.8 bits (54), Expect = 7.5
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = -2
Query: 666 RSXRKXGXXGGG-GXXXXXXGGEXGGXSGGG 577
R + G GGG G GG GG S GG
Sbjct: 75 REYNRGGHYGGGEGRQNNYRGGREGGYSNGG 105
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,862,390
Number of Sequences: 5004
Number of extensions: 29090
Number of successful extensions: 316
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 406444570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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