Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_G16
         (763 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical pr...    73   2e-13
Z69790-4|CAA93655.1|  282|Caenorhabditis elegans Hypothetical pr...    32   0.51 
Z75531-4|CAA99805.1|  408|Caenorhabditis elegans Hypothetical pr...    30   1.6  
U41545-5|AAK39137.2|  243|Caenorhabditis elegans Tetraspanin fam...    30   2.1  
AL132948-5|CAC51071.1|  321|Caenorhabditis elegans Hypothetical ...    29   2.7  
U97549-5|AAO91739.1|  212|Caenorhabditis elegans Dopamine recept...    28   8.3  
U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine recept...    28   8.3  

>Z81128-2|CAB03397.2|  232|Caenorhabditis elegans Hypothetical
           protein T23D8.2 protein.
          Length = 232

 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 44/168 (26%), Positives = 81/168 (48%), Gaps = 1/168 (0%)
 Frame = -2

Query: 576 CSXSRFWECCGAXRESHCMXVTYAXFLLXXXXXXXXXXXXXFTYGESIKESIMDGVGVLF 397
           C+   F  CCGA RE++C+ V++A  L              +   +S +  I + +    
Sbjct: 63  CTLLGFLGCCGAIRENYCLTVSFAVLLALLITCEIAAVIIGYALHDSFRLGIGNQLQTGM 122

Query: 396 KKRSDANADEAAEAVFSELQRQFECCGNTGAINYGQF-TLPESCCVKKSILSTFAGNNCT 220
            +  ++   E+A   + +  + FECCG T + ++  F T+P+SCC+++  +   A  N  
Sbjct: 123 VRYHESRGVESA---WDKTHQLFECCGVTNSSDWLTFTTIPDSCCIEE--IEGCARENAP 177

Query: 219 VDAANPGCGPKIGELYQKWNKPIAGVALGVACVEVVGALFALCLANSI 76
           +    PGC   + +   K    + G+   +A +++VG  FA CL+ SI
Sbjct: 178 L--FEPGCIHSVEQWVLKNGAMVGGICAVLAAIQLVGVCFACCLSKSI 223


>Z69790-4|CAA93655.1|  282|Caenorhabditis elegans Hypothetical
           protein F33C8.3 protein.
          Length = 282

 Score = 31.9 bits (69), Expect = 0.51
 Identities = 18/82 (21%), Positives = 33/82 (40%)
 Frame = -2

Query: 561 FWECCGAXRESHCMXVTYAXFLLXXXXXXXXXXXXXFTYGESIKESIMDGVGVLFKKRSD 382
           ++ C GA + + C    +   L+             F   E IK  +   +    + R  
Sbjct: 72  YFGCIGAWKMNQCALAFFCCILILAFFLELAAAVTLFHKQEHIKHYVESSMYDTIRNRY- 130

Query: 381 ANADEAAEAVFSELQRQFECCG 316
            +++ A +  F  +Q +FECCG
Sbjct: 131 -SSETAFKDAFDTVQEKFECCG 151


>Z75531-4|CAA99805.1|  408|Caenorhabditis elegans Hypothetical
           protein C54D10.4 protein.
          Length = 408

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 354 VFSELQRQFECCGNTGAINYGQF 286
           +   +QR++ CCG  GAI+YG F
Sbjct: 276 IADRVQRRYCCCGYNGAIDYGFF 298


>U41545-5|AAK39137.2|  243|Caenorhabditis elegans Tetraspanin family
           protein 17 protein.
          Length = 243

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 41/193 (21%), Positives = 69/193 (35%), Gaps = 30/193 (15%)
 Frame = -2

Query: 561 FWECCGAXRESHCMXVTYAXFLLXXXXXXXXXXXXXFTYGE---SIKESIMDGVGVLFKK 391
           F   CGA   S  + + +  FL+               Y +   S+KE++ + V   +  
Sbjct: 42  FLGLCGAVNRSRFLLLAFVMFLIGTFLADVAMGTLSLFYKDKVYSVKENVREIVKSKYGV 101

Query: 390 RSDANADEAAEAVFSELQRQFECCGNTGAINY-----GQFT-----------LPESCCVK 259
            +    ++       +LQ   +CCG+ G  +Y      Q T            P SCC +
Sbjct: 102 MTSEPENKMVTEFIDKLQFYEKCCGSLGPTDYISSRWSQSTNQDSEEIESPLFPVSCCTQ 161

Query: 258 ---KSILSTFAGN--NCTVDAAN------PGCGPKIGELYQKWNKPIAGVALGVACVEVV 112
               S L+  A +   C    AN       GC  ++   + +      G   G A   ++
Sbjct: 162 ITGASALNPLAKSYARCQQIGANRQWRHAVGCSERLMSWFNEQIWIFVGFGFGSALTMML 221

Query: 111 GALFALCLANSIR 73
           G   + CL + IR
Sbjct: 222 GICLSCCLISKIR 234


>AL132948-5|CAC51071.1|  321|Caenorhabditis elegans Hypothetical
           protein Y39B6A.6 protein.
          Length = 321

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -2

Query: 342 LQRQFECCGNTGAINYGQF--TLPESCCVK 259
           LQ  F CCGN G  ++  F   +P SC ++
Sbjct: 200 LQTAFRCCGNAGCSDFRVFRQDIPRSCDIR 229


>U97549-5|AAO91739.1|  212|Caenorhabditis elegans Dopamine receptor
           protein 1, isoformd protein.
          Length = 212

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 77  MELARHSANRAPTTSTQATPR 139
           M ++RH + R+ TT+T ATPR
Sbjct: 1   MTVSRHYSRRSTTTTTTATPR 21


>U97549-4|AAO91736.1|  460|Caenorhabditis elegans Dopamine receptor
           protein 1, isoforma protein.
          Length = 460

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +2

Query: 77  MELARHSANRAPTTSTQATPR 139
           M ++RH + R+ TT+T ATPR
Sbjct: 249 MTVSRHYSRRSTTTTTTATPR 269


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,244,765
Number of Sequences: 27780
Number of extensions: 221712
Number of successful extensions: 655
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)