Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_G15
(810 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 35 0.067
12_02_1174 - 26696869-26698191 33 0.27
09_02_0543 + 10427321-10428315,10428440-10429154 32 0.47
07_01_0479 + 3606663-3607448 32 0.47
06_01_0486 - 3455030-3455770 31 0.82
08_01_0059 - 394001-394708 31 1.1
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 31 1.1
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.4
09_04_0180 + 15367737-15367755,15368874-15369739 30 1.9
06_03_1506 + 30641428-30642168 30 1.9
01_06_0146 + 26969011-26969995,26970878-26970930 30 1.9
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 26 3.0
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 29 3.3
06_02_0120 + 12055076-12055175,12055322-12055725 29 3.3
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 29 3.3
11_06_0610 - 25449085-25453284 29 4.4
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 29 4.4
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 5.8
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 35.1 bits (77), Expect = 0.067
Identities = 21/61 (34%), Positives = 21/61 (34%), Gaps = 5/61 (8%)
Frame = +3
Query: 603 PGPXXXPPXPXXXXX-----PXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPPXXXL 767
PGP PP P P PG L P PR P P PPP PP
Sbjct: 44 PGPPSQPPPPQAMYQAHPQYPMPGSLPPPPPR-PPSFAPENALPPSSPPPPSPPPPPPSS 102
Query: 768 P 770
P
Sbjct: 103 P 103
>12_02_1174 - 26696869-26698191
Length = 440
Score = 33.1 bits (72), Expect = 0.27
Identities = 21/90 (23%), Positives = 22/90 (24%)
Frame = +2
Query: 485 PXXPXXPXXPXGXXXPPXXPXXXXXXXAXXXXXXXXPPXXGPXXXXPXTSXXXAPXPGPP 664
P P P P P P PP P P P P P
Sbjct: 158 PPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPPPTLP 217
Query: 665 LXSXPPXXSXXXPXXXGXAVXLXXPXXXPP 754
S PP P G + P PP
Sbjct: 218 PPSPPPPPPTVPPRTPGDTPAVVEPKPQPP 247
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +3
Query: 621 PPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPP 755
PP P P PG P P AP PPP PP
Sbjct: 59 PPAPDMTPPPGPGPAAAPSPHSPSPSNAPWVAPAADIPPPPPPPP 103
>07_01_0479 + 3606663-3607448
Length = 261
Score = 32.3 bits (70), Expect = 0.47
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +3
Query: 603 PGPXXXPPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPPXXXLP 770
PGP P P PG P P PG P PPP P P
Sbjct: 205 PGPFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPPPPFRPGMPPPPPGPQQPGQNPP 260
>06_01_0486 - 3455030-3455770
Length = 246
Score = 31.5 bits (68), Expect = 0.82
Identities = 17/65 (26%), Positives = 17/65 (26%)
Frame = +1
Query: 364 PXXXXXPPPXXXPXXXPPXXXXXPXXXXXXFXXRXXPXXPPXXPPXXXXPXGXXXPXXXP 543
P PPP P PP P P PP PP P P P
Sbjct: 90 PPYVPSPPPYVPPYIPPPTPPYVPPYIPPPTPPYVPPPTPPSPPPYVPPPTPPSPPPYVP 149
Query: 544 XSXXP 558
P
Sbjct: 150 PPSPP 154
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/67 (28%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Frame = +2
Query: 593 PPXXGPXXXXPXTSXXXAPXPGPP-LXSXPPXXSXXXPXXXGXAVXLXXPXXXPPXXXSP 769
P P P T P P PP + S PP P V P PP P
Sbjct: 68 PSPRCPSCHPPYTPPTPRPPPTPPYVPSPPPYVPPYIPPPTPPYVPPYIPPPTPPYVPPP 127
Query: 770 XSXXVPP 790
PP
Sbjct: 128 TPPSPPP 134
>08_01_0059 - 394001-394708
Length = 235
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/59 (27%), Positives = 18/59 (30%)
Frame = +3
Query: 594 RXXPGPXXXPPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPPXXXLP 770
R P P PP P P P P P P +PPP P +P
Sbjct: 8 RRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPPHISPPAPVP 66
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/51 (27%), Positives = 15/51 (29%)
Frame = +3
Query: 603 PGPXXXPPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPP 755
P P PP P P P P P + P P P PP
Sbjct: 19 PPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPPHISPPAPVPPPP 69
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +2
Query: 593 PPXXGPXXXXPXTSXXXAPXPGPPLXSXPPXXSXXXPXXXGXAVXLXXPXXXPPXXXSPX 772
PP P P + P P PPL S PP P P PP SP
Sbjct: 1164 PPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLP-----IQPPPIPPPPVPSSPS 1218
Query: 773 SXXVPP 790
S P
Sbjct: 1219 SLGYQP 1224
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.7 bits (66), Expect = 1.4
Identities = 31/136 (22%), Positives = 32/136 (23%)
Frame = +2
Query: 359 PXPXXXXXPRXXXXPXXSPPXXXXXRPXXXXXSAXXXXXXSXPXXPXXPXXPXGXXXPPX 538
P P P P SPP P + P P P PP
Sbjct: 545 PPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPP 604
Query: 539 XPXXXXXXXAXXXXXXXXPPXXGPXXXXPXTSXXXAPXPGPPLXSXPPXXSXXXPXXXGX 718
P PP P P S P P PP S P P G
Sbjct: 605 PP-----PPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSL-PNRLVPPPPAPGI 658
Query: 719 AVXLXXPXXXPPXXXS 766
P PP S
Sbjct: 659 GNKFPAPPPPPPPPRS 674
Score = 29.1 bits (62), Expect = 4.4
Identities = 30/134 (22%), Positives = 33/134 (24%), Gaps = 8/134 (5%)
Frame = +2
Query: 413 PPXXXXXRPXXXXXSAXXXXXXSXPXXPXXPXXPXGXXX----PPXXPXXXXXXXAXXXX 580
PP P + + P P P P G PP P
Sbjct: 521 PPEVQHESPSDRKLPSPSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNY 580
Query: 581 XXXXPPXXGPXXXXPXTSXXXAPXPGPPLXSXP----PXXSXXXPXXXGXAVXLXXPXXX 748
PP P P P P PP P P P +V L P
Sbjct: 581 ASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSV-LPPPPPP 639
Query: 749 PPXXXSPXSXXVPP 790
PP P PP
Sbjct: 640 PPPPSLPNRLVPPP 653
>09_04_0180 + 15367737-15367755,15368874-15369739
Length = 294
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/57 (28%), Positives = 17/57 (29%), Gaps = 1/57 (1%)
Frame = +3
Query: 603 PGPXXXPPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXS-PPPXXXPPXXXLP 770
P P PP P P P P P P P P P PP +P
Sbjct: 142 PSPRPRPPDPEPKPDPEPDPELEPEPEPEPDPEPEPEPPTPKPIPTPIPSPPPRLIP 198
>06_03_1506 + 30641428-30642168
Length = 246
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/50 (34%), Positives = 18/50 (36%)
Frame = -3
Query: 769 GRXXXGGXXXGGGEXXXGAXXXXXXPGXXRGXGXXRXPGXGXXLXXGXGG 620
G GG GGG GA G +G G PG G G GG
Sbjct: 170 GGVNGGGGSGGGGGGGGGASGYRYGAGYGKGYGYGGGPGGGGGGAGGGGG 219
>01_06_0146 + 26969011-26969995,26970878-26970930
Length = 345
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +3
Query: 609 PXXXPPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXP 752
P PP P P P PR P + P SPPP P
Sbjct: 76 PAPPPPPTADPSPPLPHDNRTPQPRAAPPPAPAPDQPAPPSPPPSLPP 123
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 26.2 bits (55), Expect(2) = 3.0
Identities = 18/60 (30%), Positives = 18/60 (30%), Gaps = 1/60 (1%)
Frame = +3
Query: 603 PGPXXXPPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAP-XXXSPPPXXXPPXXXLPXXG 779
P P PP P PG P P PG P PPP P P G
Sbjct: 230 PPPPPPPPKPANIAGA-PGLPLPPPPPPPPGPPPREIVPGQTLLPPPPPPRPLQPSPLAG 288
Score = 21.8 bits (44), Expect(2) = 3.0
Identities = 10/32 (31%), Positives = 10/32 (31%)
Frame = +3
Query: 402 PXXPPRXXPXXXXXXXXXXXSXXPXXPXXPPP 497
P PP P S P P PPP
Sbjct: 205 PPPPPPPLPASSEPVDPSAASLPPLPPPPPPP 236
>12_02_0118 -
13869237-13869307,13869375-13869465,13870321-13870440,
13870668-13870795,13871159-13871270,13871719-13871817,
13871918-13871992,13872099-13872320,13873177-13874034
Length = 591
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 603 PGPXXXPPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPP 755
P P P P PG P P P AP PPP PP
Sbjct: 53 PSSIRAPQAPPPGARPFPGS--PPPPSQPPPPFARPAAPVQQQPPPFGGPP 101
>06_02_0120 + 12055076-12055175,12055322-12055725
Length = 167
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -3
Query: 769 GRXXXGGXXXGGGEXXXGAXXXXXXPGXXRGXGXXRXPGXGXXLXXGXGGXXXGPG 602
G GG GGG PG G G PG G G GG GPG
Sbjct: 52 GYMHGGGYEHGGGYSQPRYGGGYGQPGYGGGYGQ---PGYGSGYGPGYGGGGSGPG 104
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = +3
Query: 603 PGPXXXPPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPPXXXLP 770
P P PP P PG P PG +PPP PP P
Sbjct: 433 PVPWGQPPPYASYPPPPPGSSMYNPPPPAPGQATPPPYGVQYAPPPAPIPPPGTAP 488
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 603 PGPXXXPPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPP 755
P P PP P P P + P P P AP PPP PP
Sbjct: 1155 PAPVILPP-PPIKSPPPPAPVISPPP---PVKSPPPPAPVILPPPPVKSPP 1201
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 603 PGPXXXPPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPP 755
P P PP P P P + P P P AP PPP PP
Sbjct: 1171 PAPVISPP-PPVKSPPPPAPVILPPP---PVKSPPPPAPVISPPPPVKSPP 1217
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 603 PGPXXXPPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPP 755
P P PP P P P + P P P AP PPP PP
Sbjct: 1187 PAPVILPP-PPVKSPPPPAPVISPPP---PVKSPPPPAPVILPPPPVKSPP 1233
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 603 PGPXXXPPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPP 755
P P PP P P P + P P P AP PPP PP
Sbjct: 1203 PAPVISPP-PPVKSPPPPAPVILPPP---PVKSPPPPAPVISPPPPEKSPP 1249
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/83 (25%), Positives = 23/83 (27%)
Frame = +2
Query: 503 PXXPXGXXXPPXXPXXXXXXXAXXXXXXXXPPXXGPXXXXPXTSXXXAPXPGPPLXSXPP 682
P G PP A P P P P P PPL + PP
Sbjct: 258 PNGSGGPPRPPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPPPPLANGPP 317
Query: 683 XXSXXXPXXXGXAVXLXXPXXXP 751
S P G A+ P P
Sbjct: 318 -RSIPPPPMTGGAMANFTPGAPP 339
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 5.8
Identities = 21/100 (21%), Positives = 24/100 (24%)
Frame = +3
Query: 471 PXXPXXPPPXXXXXXGGXXXXRXTPXXXTXXXLXXXXXXXXRXXPGPXXXPPXPXXXXXP 650
P P PPP G + P P P P P
Sbjct: 24 PMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPP 83
Query: 651 XPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPPXXXLP 770
P + P P + P PPP PP P
Sbjct: 84 PPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPP 123
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,517,267
Number of Sequences: 37544
Number of extensions: 200483
Number of successful extensions: 1013
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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