Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_G15
(810 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.9
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 3.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.9
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 5.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 28 9.1
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 28 9.1
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 28 9.1
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 28 9.1
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 28 9.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 9.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 9.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 9.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +3
Query: 621 PPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPPXXXLPXXGXF 785
PP P P G P P G P PPP PP P G F
Sbjct: 728 PPPPPGGLPPITGG--PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +3
Query: 621 PPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPPXXXLPXXGXF 785
PP P P G P P G P PPP PP P G F
Sbjct: 728 PPPPPGGLPPITGG--PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/61 (27%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Frame = +3
Query: 606 GPXXXPPXPXXXXXPXPGXLXXPXPRXXPGXXXSXX-APXXXSPPPXXXPPXXXLPXXGX 782
GP P P P P P+ G AP +PPP PP P
Sbjct: 337 GPPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSA 396
Query: 783 F 785
F
Sbjct: 397 F 397
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +3
Query: 621 PPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPPXXXLPXXGXF 785
PP P P G P P G P PPP PP P G F
Sbjct: 311 PPPPPGGLPPITGG--PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 363
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 5.2
Identities = 31/135 (22%), Positives = 31/135 (22%)
Frame = -3
Query: 769 GRXXXGGXXXGGGEXXXGAXXXXXXPGXXRGXGXXRXPGXGXXLXXGXGGXXXGPGXXRX 590
G GG GGG G P G G G G GG G G
Sbjct: 34 GGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCG 93
Query: 589 XXXXXXXSXXXVXXXGVXRXXXXPPXXXXXXGGGXXGXXGXXXXXXXXXXXXXXGXXRGG 410
G PP GGG G G G GG
Sbjct: 94 GGGGGCGGGGGCG--GGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGG 151
Query: 409 XXGXXGXAGXXXXXG 365
G G G G
Sbjct: 152 GGGGCGGGGGGCGGG 166
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +1
Query: 364 PXXXXXPPPXXXPXXXPPXXXXXPXXXXXXFXXRXXPXXPPXXPPXXXXP 513
P PPP P PP P P PP PP P
Sbjct: 144 PRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPP 193
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +3
Query: 621 PPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPPXXXLPXXG 779
PP P P P P PR P AP P PP P G
Sbjct: 749 PPLPMSDYRPHPSG-PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPG 800
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +3
Query: 621 PPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPPXXXLPXXG 779
PP P P P P PR P AP P PP P G
Sbjct: 749 PPLPMSDYRPHPSG-PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPG 800
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +3
Query: 603 PGPXXXPPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXP 752
PGP P P PG P PG AP PP P
Sbjct: 200 PGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGP 249
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +3
Query: 603 PGPXXXPPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXP 752
PGP P P PG P PG AP PP P
Sbjct: 195 PGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGP 244
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +3
Query: 621 PPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPPXXXLPXXG 779
PP P P P P PR P AP P PP P G
Sbjct: 749 PPLPMSDYRPHPSG-PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPG 800
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +3
Query: 603 PGPXXXPPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXP 752
PGP P P PG P PG AP PP P
Sbjct: 195 PGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPGPPGP 244
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = +3
Query: 621 PPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPPXXXLPXXG 779
PP P P P P PR P AP P PP P G
Sbjct: 749 PPLPMSDYRPHPSG-PSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPG 800
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = +3
Query: 603 PGPXXXPPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPPXXXLPXXG 779
P P P P P P P P P S P SPPP PP P G
Sbjct: 257 PPPAAGSPPPPRTGSPPPPPTGSPPP---PPAGGSPPPPRAGSPPP--PPPPRGSPPTG 310
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = +3
Query: 603 PGPXXXPPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPPXXXLPXXG 779
P P P P P P P P P S P SPPP PP P G
Sbjct: 278 PPPAAGSPPPPRTGSPPPPPTGSPPP---PPAGGSPPPPRAGSPPP--PPPPRGSPPTG 331
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.9 bits (59), Expect = 9.1
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = +3
Query: 603 PGPXXXPPXPXXXXXPXPGXLXXPXPRXXPGXXXSXXAPXXXSPPPXXXPPXXXLPXXG 779
P P P P P P P P P S P SPPP PP P G
Sbjct: 263 PPPAAGSPPPPRTGSPPPPPTGSPPP---PPAGGSPPPPRAGSPPP--PPPPRGSPPTG 316
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,661,085
Number of Sequences: 27780
Number of extensions: 136683
Number of successful extensions: 507
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 473
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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