Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_G12
(793 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029946-1|ABM92820.1| 637|Drosophila melanogaster IP16971p pro... 34 0.19
AE013599-669|AAF59074.1| 417|Drosophila melanogaster CG14747-PA... 34 0.19
BT021330-1|AAX33478.1| 1041|Drosophila melanogaster RE04229p pro... 33 0.34
AE014134-531|AAF51167.1| 1041|Drosophila melanogaster CG3558-PA,... 33 0.34
BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p pro... 33 0.45
AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-P... 33 0.45
AY052101-1|AAK93525.1| 607|Drosophila melanogaster SD04973p pro... 32 0.78
AF145664-1|AAD38639.1| 793|Drosophila melanogaster BcDNA.GH1111... 32 0.78
AE013599-3005|AAF57474.1| 567|Drosophila melanogaster CG8929-PC... 32 0.78
AE013599-3004|AAF57475.2| 607|Drosophila melanogaster CG8929-PB... 32 0.78
AE013599-3003|AAF57473.2| 607|Drosophila melanogaster CG8929-PA... 32 0.78
AE013599-555|AAF59160.1| 793|Drosophila melanogaster CG2910-PB,... 32 0.78
AE013599-554|AAM68878.1| 793|Drosophila melanogaster CG2910-PA,... 32 0.78
M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-relate... 31 1.8
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA... 31 1.8
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 30 3.2
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 30 3.2
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 30 3.2
AY128424-1|AAM75017.1| 1150|Drosophila melanogaster GH14795p pro... 30 3.2
AF348329-1|AAK31343.1| 749|Drosophila melanogaster Brahma-assoc... 30 3.2
AE014298-2789|AAF48904.1| 1150|Drosophila melanogaster CG7358-PA... 30 3.2
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 30 3.2
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 30 3.2
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 30 3.2
AY058563-1|AAL13792.1| 652|Drosophila melanogaster LD25239p pro... 30 4.2
AE014296-1420|AAF50445.2| 652|Drosophila melanogaster CG7185-PA... 30 4.2
AE014134-147|AAF51462.1| 119|Drosophila melanogaster CG13947-PA... 30 4.2
M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein ( D.me... 29 5.5
M19537-1|AAA28827.1| 408|Drosophila melanogaster RNA polymerase... 29 5.5
BT016119-1|AAV37004.1| 1234|Drosophila melanogaster LD04582p pro... 29 5.5
AY094900-1|AAM11253.1| 1004|Drosophila melanogaster RE74744p pro... 29 5.5
AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p pro... 29 5.5
AY060685-1|AAL28233.1| 388|Drosophila melanogaster GH12561p pro... 29 5.5
AL133503-5|CAB72240.1| 1234|Drosophila melanogaster EG:BACH48C10... 29 5.5
AF145683-1|AAD38658.1| 1004|Drosophila melanogaster BcDNA.LD2337... 29 5.5
AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA... 29 5.5
AE014298-392|AAN09075.1| 1234|Drosophila melanogaster CG2841-PC,... 29 5.5
AE014298-391|AAN09074.1| 1234|Drosophila melanogaster CG2841-PB,... 29 5.5
AE014298-390|AAF45776.2| 1234|Drosophila melanogaster CG2841-PA,... 29 5.5
AE014134-532|AAN10405.1| 1028|Drosophila melanogaster CG3558-PB,... 29 5.5
AE013599-1401|AAS64864.1| 1004|Drosophila melanogaster CG8878-PB... 29 5.5
AE013599-1400|AAF58576.1| 1004|Drosophila melanogaster CG8878-PA... 29 5.5
BT025225-1|ABF17916.1| 803|Drosophila melanogaster FI01015p pro... 29 7.3
BT021253-1|AAX33401.1| 803|Drosophila melanogaster RE58581p pro... 29 7.3
AF095926-1|AAC97116.1| 320|Drosophila melanogaster intermediate... 29 7.3
AE014296-1870|AAF50119.2| 803|Drosophila melanogaster CG12296-P... 29 7.3
AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc fin... 29 9.6
AY058684-1|AAL13913.1| 857|Drosophila melanogaster LD40216p pro... 29 9.6
AY047559-1|AAK77291.1| 647|Drosophila melanogaster GH07383p pro... 29 9.6
AF203478-1|AAF18985.1| 857|Drosophila melanogaster Dalmatian pr... 29 9.6
AE014298-1457|AAN09261.3| 2309|Drosophila melanogaster CG17255-P... 29 9.6
AE014298-1456|AAF46591.4| 2309|Drosophila melanogaster CG17255-P... 29 9.6
AE014297-4228|AAF56784.1| 281|Drosophila melanogaster CG14065-P... 29 9.6
AE014297-3576|AAF56315.1| 647|Drosophila melanogaster CG13625-P... 29 9.6
AE014297-1011|AAF54430.1| 857|Drosophila melanogaster CG8374-PA... 29 9.6
AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB, ... 29 9.6
AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA, ... 29 9.6
>BT029946-1|ABM92820.1| 637|Drosophila melanogaster IP16971p
protein.
Length = 637
Score = 34.3 bits (75), Expect = 0.19
Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 5/80 (6%)
Frame = +1
Query: 163 LTPDVRSPPRSEPG*GRGATTVNTTTRRRGSPQGTPSRRSLRGESKALKRRPPRYGS--- 333
+ P SPPR G G G + R P G PS S E + RPPR +
Sbjct: 262 IRPTPHSPPRPIFGLGYGNGYSYGSPERYTPPTGRPSSGSSE-ERPSYAARPPRPTADRP 320
Query: 334 --PTGRPDGAAGVPEYPAGP 387
P G P A PEYP P
Sbjct: 321 EYPPGPPRPTADRPEYPPRP 340
>AE013599-669|AAF59074.1| 417|Drosophila melanogaster CG14747-PA
protein.
Length = 417
Score = 34.3 bits (75), Expect = 0.19
Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 5/80 (6%)
Frame = +1
Query: 163 LTPDVRSPPRSEPG*GRGATTVNTTTRRRGSPQGTPSRRSLRGESKALKRRPPRYGS--- 333
+ P SPPR G G G + R P G PS S E + RPPR +
Sbjct: 209 IRPTPHSPPRPIFGLGYGNGYSYGSPERYTPPTGRPSSGSSE-ERPSYAARPPRPTADRP 267
Query: 334 --PTGRPDGAAGVPEYPAGP 387
P G P A PEYP P
Sbjct: 268 EYPPGPPRPTADRPEYPPRP 287
>BT021330-1|AAX33478.1| 1041|Drosophila melanogaster RE04229p protein.
Length = 1041
Score = 33.5 bits (73), Expect = 0.34
Identities = 22/84 (26%), Positives = 33/84 (39%)
Frame = +2
Query: 5 FFFFSGRGPNLLRGPRAKGARGVCETQRSAWCCEQTAGPRYFRTHPLNDSSALLHPTSDP 184
+ FF+G NL+ + RG+ + Q SA CE + + P S + TS
Sbjct: 885 YAFFTGAASNLVGNNASNDGRGISQAQTSAGTCETSLSTQ----PPAGASRTGANATSTA 940
Query: 185 LRGQNPDEVGGLPRLTLQPDGAAH 256
G N G L+ Q + H
Sbjct: 941 ASGSNSSIAGSTLTLSAQSNTTTH 964
>AE014134-531|AAF51167.1| 1041|Drosophila melanogaster CG3558-PA,
isoform A protein.
Length = 1041
Score = 33.5 bits (73), Expect = 0.34
Identities = 22/84 (26%), Positives = 33/84 (39%)
Frame = +2
Query: 5 FFFFSGRGPNLLRGPRAKGARGVCETQRSAWCCEQTAGPRYFRTHPLNDSSALLHPTSDP 184
+ FF+G NL+ + RG+ + Q SA CE + + P S + TS
Sbjct: 885 YAFFTGAASNLVGNNASNDGRGISQAQTSAGTCETSLSTQ----PPAGASRTGANATSTA 940
Query: 185 LRGQNPDEVGGLPRLTLQPDGAAH 256
G N G L+ Q + H
Sbjct: 941 ASGSNSSIAGSTLTLSAQSNTTTH 964
>BT009937-1|AAQ22406.1| 1872|Drosophila melanogaster SD06328p
protein.
Length = 1872
Score = 33.1 bits (72), Expect = 0.45
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 184 PPRSEPG*GRGAT---TVNTTTRRRGSPQGTPSRRSLRGESKALKRRPPRYG 330
PP+ P GR A+ T TT+ G PQ +P RRS+ G L P G
Sbjct: 455 PPQQAPTRGRHASIQSTSTTTSSPAGRPQISPRRRSIFGSEPRLPELPSALG 506
>AE013599-3254|AAF46751.2| 1831|Drosophila melanogaster CG30263-PA
protein.
Length = 1831
Score = 33.1 bits (72), Expect = 0.45
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 184 PPRSEPG*GRGAT---TVNTTTRRRGSPQGTPSRRSLRGESKALKRRPPRYG 330
PP+ P GR A+ T TT+ G PQ +P RRS+ G L P G
Sbjct: 454 PPQQAPTRGRHASIQSTSTTTSSPAGRPQISPRRRSIFGSEPRLPELPSALG 505
>AY052101-1|AAK93525.1| 607|Drosophila melanogaster SD04973p
protein.
Length = 607
Score = 32.3 bits (70), Expect = 0.78
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 178 RSPPRSEPG*GRGAT-TVNTTTRRRGSPQGTPSRRSLRGESKALKRRP--PRYGSPTGRP 348
+SPP S P R +++ RRG P+ P RS AL RRP G P P
Sbjct: 138 KSPPLSPPPRRRSPPMAMHSGMDRRGGPRSPPMPRSPNNSHDALMRRPGNGHGGRPRSPP 197
Query: 349 DGAAG 363
+ + G
Sbjct: 198 EPSGG 202
>AF145664-1|AAD38639.1| 793|Drosophila melanogaster BcDNA.GH11110
protein.
Length = 793
Score = 32.3 bits (70), Expect = 0.78
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 250 GSPQGTPSRRSLRGESKALKRRPPRYGSPTGRPDGAAGVP-EYPAGPQPAC 399
G P +P R S + L R P RYGSP P P E PAG + C
Sbjct: 52 GVPGDSPERLSPERMRRRLDRSPSRYGSPHREPYMRGPPPAERPAGYKVLC 102
>AE013599-3005|AAF57474.1| 567|Drosophila melanogaster CG8929-PC,
isoform C protein.
Length = 567
Score = 32.3 bits (70), Expect = 0.78
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 178 RSPPRSEPG*GRGAT-TVNTTTRRRGSPQGTPSRRSLRGESKALKRRP--PRYGSPTGRP 348
+SPP S P R +++ RRG P+ P RS AL RRP G P P
Sbjct: 98 KSPPLSPPPRRRSPPMAMHSGMDRRGGPRSPPMPRSPNNSHDALMRRPGNGHGGRPRSPP 157
Query: 349 DGAAG 363
+ + G
Sbjct: 158 EPSGG 162
>AE013599-3004|AAF57475.2| 607|Drosophila melanogaster CG8929-PB,
isoform B protein.
Length = 607
Score = 32.3 bits (70), Expect = 0.78
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 178 RSPPRSEPG*GRGAT-TVNTTTRRRGSPQGTPSRRSLRGESKALKRRP--PRYGSPTGRP 348
+SPP S P R +++ RRG P+ P RS AL RRP G P P
Sbjct: 138 KSPPLSPPPRRRSPPMAMHSGMDRRGGPRSPPMPRSPNNSHDALMRRPGNGHGGRPRSPP 197
Query: 349 DGAAG 363
+ + G
Sbjct: 198 EPSGG 202
>AE013599-3003|AAF57473.2| 607|Drosophila melanogaster CG8929-PA,
isoform A protein.
Length = 607
Score = 32.3 bits (70), Expect = 0.78
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +1
Query: 178 RSPPRSEPG*GRGAT-TVNTTTRRRGSPQGTPSRRSLRGESKALKRRP--PRYGSPTGRP 348
+SPP S P R +++ RRG P+ P RS AL RRP G P P
Sbjct: 138 KSPPLSPPPRRRSPPMAMHSGMDRRGGPRSPPMPRSPNNSHDALMRRPGNGHGGRPRSPP 197
Query: 349 DGAAG 363
+ + G
Sbjct: 198 EPSGG 202
>AE013599-555|AAF59160.1| 793|Drosophila melanogaster CG2910-PB,
isoform B protein.
Length = 793
Score = 32.3 bits (70), Expect = 0.78
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 250 GSPQGTPSRRSLRGESKALKRRPPRYGSPTGRPDGAAGVP-EYPAGPQPAC 399
G P +P R S + L R P RYGSP P P E PAG + C
Sbjct: 52 GVPGDSPERLSPERMRRRLDRSPSRYGSPHREPYMRGPPPAERPAGYKVLC 102
>AE013599-554|AAM68878.1| 793|Drosophila melanogaster CG2910-PA,
isoform A protein.
Length = 793
Score = 32.3 bits (70), Expect = 0.78
Identities = 20/51 (39%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 250 GSPQGTPSRRSLRGESKALKRRPPRYGSPTGRPDGAAGVP-EYPAGPQPAC 399
G P +P R S + L R P RYGSP P P E PAG + C
Sbjct: 52 GVPGDSPERLSPERMRRRLDRSPSRYGSPHREPYMRGPPPAERPAGYKVLC 102
>M28334-1|AAA28422.1| 421|Drosophila melanogaster type VI-related
collagen protein.
Length = 421
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 54 QKGRAGYVRLNGLHGVVSRPRAQGILGP 137
QKG GY LNG G V P +G GP
Sbjct: 57 QKGDTGYPGLNGTDGPVGAPGERGFTGP 84
>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
protein.
Length = 2284
Score = 31.1 bits (67), Expect = 1.8
Identities = 35/122 (28%), Positives = 47/122 (38%), Gaps = 2/122 (1%)
Frame = +1
Query: 136 PPTKRLLCTLTPDVRSPPRS-EPG*GRGATTVNTTTRR-RGSPQGTPSRRSLRGESKALK 309
PP+ + T+ P R P S +PG + T T+T R R P T S A+
Sbjct: 937 PPSTKRTPTIAPKPRCYPGSKDPGCPQITTRAPTSTSRPRCYPGSTDPECHPTTSSPAIT 996
Query: 310 RRPPRYGSPTGRPDGAAGVPEYPAGPQPACRVGTRCAVDRSLYLLHGSAPRGLTPSGHPL 489
R P T P A YP +P C+ TR + S + P L P P
Sbjct: 997 RIPVT----TRIPLTTAKPRCYPGSQEPGCQPATRPPITTSKPRCY---PGSLDPECQPS 1049
Query: 490 TF 495
T+
Sbjct: 1050 TY 1051
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 30.3 bits (65), Expect = 3.2
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 54 QKGRAGYVRLNGLHGVVSRPRAQGILGP 137
QKG GY LNG G V P +G GP
Sbjct: 1411 QKGDTGYPGLNGNDGPVGAPGERGFTGP 1438
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 30.3 bits (65), Expect = 3.2
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 54 QKGRAGYVRLNGLHGVVSRPRAQGILGP 137
QKG GY LNG G V P +G GP
Sbjct: 1411 QKGDTGYPGLNGNDGPVGAPGERGFTGP 1438
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 30.3 bits (65), Expect = 3.2
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 54 QKGRAGYVRLNGLHGVVSRPRAQGILGP 137
QKG GY LNG G V P +G GP
Sbjct: 1411 QKGDTGYPGLNGNDGPVGAPGERGFTGP 1438
>AY128424-1|AAM75017.1| 1150|Drosophila melanogaster GH14795p
protein.
Length = 1150
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/26 (61%), Positives = 16/26 (61%)
Frame = -3
Query: 395 AGCGPAGYSGTPAAPSGRPVGLPYRG 318
AG GP G SGTP P G VG P RG
Sbjct: 537 AGGGPGGPSGTPGRPGGF-VGGPKRG 561
>AF348329-1|AAK31343.1| 749|Drosophila melanogaster
Brahma-associated protein 111kD protein.
Length = 749
Score = 30.3 bits (65), Expect = 3.2
Identities = 31/113 (27%), Positives = 41/113 (36%), Gaps = 4/113 (3%)
Frame = +1
Query: 160 TLTPDVRSPPRSEPG*GRGATTVNTTTRRRGSPQGTPSRRSL---RGESKALKRRPPRYG 330
T P PP P G T TTTRR +P P + L +G P +
Sbjct: 479 TPVPTPTPPPEVAPAAG-AVTAATTTTRRTPTPPPVPQQVPLPQQQGGPAPPPGMPQMHP 537
Query: 331 SPTGRPDGAAGVPEYPAGPQPACRV-GTRCAVDRSLYLLHGSAPRGLTPSGHP 486
P P G + +P + QP + G + Y +G P G P G P
Sbjct: 538 HPGHPPPGHSLMPPHMGPHQPPPGMPGLPPPPPHTGYANYGGPPHG-PPPGPP 589
>AE014298-2789|AAF48904.1| 1150|Drosophila melanogaster CG7358-PA
protein.
Length = 1150
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/26 (61%), Positives = 16/26 (61%)
Frame = -3
Query: 395 AGCGPAGYSGTPAAPSGRPVGLPYRG 318
AG GP G SGTP P G VG P RG
Sbjct: 537 AGGGPGGPSGTPGRPGGF-VGGPKRG 561
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 30.3 bits (65), Expect = 3.2
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 54 QKGRAGYVRLNGLHGVVSRPRAQGILGP 137
QKG GY LNG G V P +G GP
Sbjct: 1412 QKGDTGYPGLNGNDGPVGAPGERGFTGP 1439
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 30.3 bits (65), Expect = 3.2
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 54 QKGRAGYVRLNGLHGVVSRPRAQGILGP 137
QKG GY LNG G V P +G GP
Sbjct: 1412 QKGDTGYPGLNGNDGPVGAPGERGFTGP 1439
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 30.3 bits (65), Expect = 3.2
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 54 QKGRAGYVRLNGLHGVVSRPRAQGILGP 137
QKG GY LNG G V P +G GP
Sbjct: 1412 QKGDTGYPGLNGNDGPVGAPGERGFTGP 1439
>AY058563-1|AAL13792.1| 652|Drosophila melanogaster LD25239p
protein.
Length = 652
Score = 29.9 bits (64), Expect = 4.2
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +1
Query: 259 QGTPSRRSLRGESKALKRRPPRYGS--PTGRPDGAAGVPEYPAGPQPA 396
QG P +RG + RRPP +G P G P G P P GP A
Sbjct: 311 QGGPMGMPVRGPAGPDWRRPPMHGGFPPQGPPRGLPPAPG-PGGPHGA 357
>AE014296-1420|AAF50445.2| 652|Drosophila melanogaster CG7185-PA
protein.
Length = 652
Score = 29.9 bits (64), Expect = 4.2
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +1
Query: 259 QGTPSRRSLRGESKALKRRPPRYGS--PTGRPDGAAGVPEYPAGPQPA 396
QG P +RG + RRPP +G P G P G P P GP A
Sbjct: 311 QGGPMGMPVRGPAGPDWRRPPMHGGFPPQGPPRGLPPAPG-PGGPHGA 357
>AE014134-147|AAF51462.1| 119|Drosophila melanogaster CG13947-PA
protein.
Length = 119
Score = 29.9 bits (64), Expect = 4.2
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +1
Query: 247 RGSPQGTPSRRSLRGESKALKRRPPRYGSPTGRPDGAAGVPEYPAGP 387
+G PQG P G + P G P G P G G P P GP
Sbjct: 35 QGGPQGGPQGGPQGGPQGGPQGGPQ--GGPQGGPQGGPGGPGGPGGP 79
>M27431-1|AAA28868.1| 1896|Drosophila melanogaster protein (
D.melanogaster RpII215gene encoding RNA polymerase II,
largest subunit, completecds. ).
Length = 1896
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +1
Query: 232 TTTRRRGSPQGTPSRRSLRGESKALKRRPPRYGSPTGRPDGAAGVPEY-PAGPQ 390
T+ SPQ +P+ + P Y P+ DG+ G P+Y P PQ
Sbjct: 1732 TSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQ 1785
>M19537-1|AAA28827.1| 408|Drosophila melanogaster RNA polymerase II
largest subunit protein.
Length = 408
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +1
Query: 232 TTTRRRGSPQGTPSRRSLRGESKALKRRPPRYGSPTGRPDGAAGVPEY-PAGPQ 390
T+ SPQ +P+ + P Y P+ DG+ G P+Y P PQ
Sbjct: 251 TSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQ 304
>BT016119-1|AAV37004.1| 1234|Drosophila melanogaster LD04582p
protein.
Length = 1234
Score = 29.5 bits (63), Expect = 5.5
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +1
Query: 250 GSPQGTPSRRSLRGESKALKRRPPRYGSPTGRPDGAAGVPE----YPAGPQPACRVGT 411
G P+ TP +R L+ + K PP + S G A +PE P PQPA R+ T
Sbjct: 312 GGPEPTPRKRLLQIKKKTAPAPPPDFQS-GGDNISLASLPEPVTPTPNIPQPAPRITT 368
>AY094900-1|AAM11253.1| 1004|Drosophila melanogaster RE74744p protein.
Length = 1004
Score = 29.5 bits (63), Expect = 5.5
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 241 RRRGSPQGTPSRRSLRGESKALKRRPP-RYGSPTGRPDGAAGVPEYPAG 384
R RG P+GT +++ +++ + +PP + GRP +GV + AG
Sbjct: 859 RARGRPKGTSRKQTTSRQAQPHQNQPPVKVHRGVGRPGKNSGVVKLAAG 907
>AY089555-1|AAL90293.1| 1429|Drosophila melanogaster LD43558p protein.
Length = 1429
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +1
Query: 232 TTTRRRGSPQGTPSRRSLRGESKALKRRPPRYGSPTGRPDGAAGVPEY-PAGPQ 390
T+ SPQ +P+ + P Y P+ DG+ G P+Y P PQ
Sbjct: 1272 TSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQ 1325
>AY060685-1|AAL28233.1| 388|Drosophila melanogaster GH12561p
protein.
Length = 388
Score = 29.5 bits (63), Expect = 5.5
Identities = 21/80 (26%), Positives = 30/80 (37%)
Frame = +2
Query: 17 SGRGPNLLRGPRAKGARGVCETQRSAWCCEQTAGPRYFRTHPLNDSSALLHPTSDPLRGQ 196
SG NL+ + RG+ + Q SA CE + + P S + TS G
Sbjct: 236 SGAASNLVGNNASNDGRGISQAQTSAGTCETSLSTQ----PPAGASRTGANATSTAASGS 291
Query: 197 NPDEVGGLPRLTLQPDGAAH 256
N G L+ Q + H
Sbjct: 292 NSSIAGSTLTLSAQSNTTTH 311
>AL133503-5|CAB72240.1| 1234|Drosophila melanogaster EG:BACH48C10.5
protein.
Length = 1234
Score = 29.5 bits (63), Expect = 5.5
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +1
Query: 250 GSPQGTPSRRSLRGESKALKRRPPRYGSPTGRPDGAAGVPE----YPAGPQPACRVGT 411
G P+ TP +R L+ + K PP + S G A +PE P PQPA R+ T
Sbjct: 312 GGPEPTPRKRLLQIKKKTAPAPPPDFQS-GGDNISLASLPEPVTPTPNIPQPAPRITT 368
>AF145683-1|AAD38658.1| 1004|Drosophila melanogaster BcDNA.LD23371
protein.
Length = 1004
Score = 29.5 bits (63), Expect = 5.5
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 241 RRRGSPQGTPSRRSLRGESKALKRRPP-RYGSPTGRPDGAAGVPEYPAG 384
R RG P+GT +++ +++ + +PP + GRP +GV + AG
Sbjct: 859 RARGRPKGTSRKQTTSRQAQPHQNQPPVKVHRGVGRPGKNSGVVKLAAG 907
>AE014298-1637|AAF48057.1| 1887|Drosophila melanogaster CG1554-PA
protein.
Length = 1887
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/54 (29%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = +1
Query: 232 TTTRRRGSPQGTPSRRSLRGESKALKRRPPRYGSPTGRPDGAAGVPEY-PAGPQ 390
T+ SPQ +P+ + P Y P+ DG+ G P+Y P PQ
Sbjct: 1730 TSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQ 1783
>AE014298-392|AAN09075.1| 1234|Drosophila melanogaster CG2841-PC,
isoform C protein.
Length = 1234
Score = 29.5 bits (63), Expect = 5.5
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +1
Query: 250 GSPQGTPSRRSLRGESKALKRRPPRYGSPTGRPDGAAGVPE----YPAGPQPACRVGT 411
G P+ TP +R L+ + K PP + S G A +PE P PQPA R+ T
Sbjct: 312 GGPEPTPRKRLLQIKKKTAPAPPPDFQS-GGDNISLASLPEPVTPTPNIPQPAPRITT 368
>AE014298-391|AAN09074.1| 1234|Drosophila melanogaster CG2841-PB,
isoform B protein.
Length = 1234
Score = 29.5 bits (63), Expect = 5.5
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +1
Query: 250 GSPQGTPSRRSLRGESKALKRRPPRYGSPTGRPDGAAGVPE----YPAGPQPACRVGT 411
G P+ TP +R L+ + K PP + S G A +PE P PQPA R+ T
Sbjct: 312 GGPEPTPRKRLLQIKKKTAPAPPPDFQS-GGDNISLASLPEPVTPTPNIPQPAPRITT 368
>AE014298-390|AAF45776.2| 1234|Drosophila melanogaster CG2841-PA,
isoform A protein.
Length = 1234
Score = 29.5 bits (63), Expect = 5.5
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +1
Query: 250 GSPQGTPSRRSLRGESKALKRRPPRYGSPTGRPDGAAGVPE----YPAGPQPACRVGT 411
G P+ TP +R L+ + K PP + S G A +PE P PQPA R+ T
Sbjct: 312 GGPEPTPRKRLLQIKKKTAPAPPPDFQS-GGDNISLASLPEPVTPTPNIPQPAPRITT 368
>AE014134-532|AAN10405.1| 1028|Drosophila melanogaster CG3558-PB,
isoform B protein.
Length = 1028
Score = 29.5 bits (63), Expect = 5.5
Identities = 21/80 (26%), Positives = 30/80 (37%)
Frame = +2
Query: 17 SGRGPNLLRGPRAKGARGVCETQRSAWCCEQTAGPRYFRTHPLNDSSALLHPTSDPLRGQ 196
SG NL+ + RG+ + Q SA CE + + P S + TS G
Sbjct: 876 SGAASNLVGNNASNDGRGISQAQTSAGTCETSLSTQ----PPAGASRTGANATSTAASGS 931
Query: 197 NPDEVGGLPRLTLQPDGAAH 256
N G L+ Q + H
Sbjct: 932 NSSIAGSTLTLSAQSNTTTH 951
>AE013599-1401|AAS64864.1| 1004|Drosophila melanogaster CG8878-PB,
isoform B protein.
Length = 1004
Score = 29.5 bits (63), Expect = 5.5
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 241 RRRGSPQGTPSRRSLRGESKALKRRPP-RYGSPTGRPDGAAGVPEYPAG 384
R RG P+GT +++ +++ + +PP + GRP +GV + AG
Sbjct: 859 RARGRPKGTSRKQTTSRQAQPHQNQPPVKVHRGVGRPGKNSGVVKLAAG 907
>AE013599-1400|AAF58576.1| 1004|Drosophila melanogaster CG8878-PA,
isoform A protein.
Length = 1004
Score = 29.5 bits (63), Expect = 5.5
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 241 RRRGSPQGTPSRRSLRGESKALKRRPP-RYGSPTGRPDGAAGVPEYPAG 384
R RG P+GT +++ +++ + +PP + GRP +GV + AG
Sbjct: 859 RARGRPKGTSRKQTTSRQAQPHQNQPPVKVHRGVGRPGKNSGVVKLAAG 907
>BT025225-1|ABF17916.1| 803|Drosophila melanogaster FI01015p
protein.
Length = 803
Score = 29.1 bits (62), Expect = 7.3
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 169 PDVRSPPRSEPG*GR--GATTVNTTTRRRGSPQGTPSRRSLRGESKALKRRPPR 324
P + SPPRSE TT ++TT++R SP+ + +GE K + PP+
Sbjct: 378 PSLPSPPRSESSVTNNVATTTTSSTTKKRSSPK----PKGKKGEKKPMP--PPQ 425
>BT021253-1|AAX33401.1| 803|Drosophila melanogaster RE58581p
protein.
Length = 803
Score = 29.1 bits (62), Expect = 7.3
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 169 PDVRSPPRSEPG*GR--GATTVNTTTRRRGSPQGTPSRRSLRGESKALKRRPPR 324
P + SPPRSE TT ++TT++R SP+ + +GE K + PP+
Sbjct: 378 PSLPSPPRSESSVTNNVATTTTSSTTKKRSSPK----PKGKKGEKKPMP--PPQ 425
>AF095926-1|AAC97116.1| 320|Drosophila melanogaster intermediate
neuroblasts defectiveprotein protein.
Length = 320
Score = 29.1 bits (62), Expect = 7.3
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Frame = +1
Query: 280 SLRGESKALKRRPPRYGSPTGRPDGAAGV------PEYPAGPQPACRVGT 411
SL + L ++ + GSP G P AA V P P P PA VG+
Sbjct: 9 SLLSDRPNLSQKKEKLGSPVGSPTAAAAVAAAAMLPSIPMLPYPASYVGS 58
>AE014296-1870|AAF50119.2| 803|Drosophila melanogaster CG12296-PA
protein.
Length = 803
Score = 29.1 bits (62), Expect = 7.3
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +1
Query: 169 PDVRSPPRSEPG*GR--GATTVNTTTRRRGSPQGTPSRRSLRGESKALKRRPPR 324
P + SPPRSE TT ++TT++R SP+ + +GE K + PP+
Sbjct: 378 PSLPSPPRSESSVTNNVATTTTSSTTKKRSSPK----PKGKKGEKKPMP--PPQ 425
>AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc finger
protein rhinoceros protein.
Length = 3241
Score = 28.7 bits (61), Expect = 9.6
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = +3
Query: 147 TTPLHSYTRRPIPSEVRTRMR*GGYHG*HYNQTARLTPRYAQPTEPSRRIEGSETSAASV 326
TTP H ++ P+ Y+G Y Q A + PTEP + G+ +V
Sbjct: 2213 TTPAHQQQQQRTPNNQ--------YNGTIYPQLAGIMHPQTTPTEPPSSLYGNGGVGGAV 2264
Query: 327 RQPD-GPPRRCRWCPGIPRWTTT 392
+ PP + PG P TT
Sbjct: 2265 QSTTLPPPAQVNQYPGTPYSATT 2287
>AY058684-1|AAL13913.1| 857|Drosophila melanogaster LD40216p
protein.
Length = 857
Score = 28.7 bits (61), Expect = 9.6
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 9/103 (8%)
Frame = +1
Query: 142 TKRLLCTLTPDVRSPPRSEPG*GRGATTVNTTTRRRGSPQGTPSRRSLRGESKALKR--R 315
T+ + C +PDV + R PG + ++ S G P + S+ + +++ R
Sbjct: 4 TRPVPCVPSPDVNTATRRNPGRPK-KQSIGADLSTTISKPGRPKKLSIGADLTTIRKPGR 62
Query: 316 PPRYGS-------PTGRPDGAAGVPEYPAGPQPACRVGTRCAV 423
P + G+ GRP + A +P CR+ +C V
Sbjct: 63 PKKLGADLTTIIRKPGRPTKLSNKQSLTALNEPECRI-RKCVV 104
>AY047559-1|AAK77291.1| 647|Drosophila melanogaster GH07383p
protein.
Length = 647
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +1
Query: 178 RSPPRSEPG*GRGATTVNTTTRRRGSPQGTPSRRSLRGESKALKRRPPRYGSPTGR 345
+SPPR G + T RRR S Q P RR + +RR + +P R
Sbjct: 230 QSPPRKRTG------KASPTRRRRDSDQSPPRRRRSNSDQSPPRRRRDKDSTPPRR 279
>AF203478-1|AAF18985.1| 857|Drosophila melanogaster Dalmatian
protein.
Length = 857
Score = 28.7 bits (61), Expect = 9.6
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 9/103 (8%)
Frame = +1
Query: 142 TKRLLCTLTPDVRSPPRSEPG*GRGATTVNTTTRRRGSPQGTPSRRSLRGESKALKR--R 315
T+ + C +PDV + R PG + ++ S G P + S+ + +++ R
Sbjct: 4 TRPVPCVPSPDVNTATRRNPGRPK-KQSIGADLSTTISKPGRPKKLSIGADLTTIRKPGR 62
Query: 316 PPRYGS-------PTGRPDGAAGVPEYPAGPQPACRVGTRCAV 423
P + G+ GRP + A +P CR+ +C V
Sbjct: 63 PKKLGADLTTIIRKPGRPTKLSNKQSLTALNEPECRI-RKCVV 104
>AE014298-1457|AAN09261.3| 2309|Drosophila melanogaster CG17255-PB,
isoform B protein.
Length = 2309
Score = 28.7 bits (61), Expect = 9.6
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Frame = +1
Query: 178 RSPPRSEPG*GRGATTVNTTTRRRG-SPQGTPSRRSLRG-------ESKALKRRPPRYGS 333
RSP S G GA + + G SP+G PSRR G + +R+P GS
Sbjct: 1158 RSPKES----GNGAPNSGASANKAGFSPRGEPSRRGRGGLSSGGGASASCYRRQPVGTGS 1213
Query: 334 PTGRPDGAAG 363
G G +G
Sbjct: 1214 AGGSGSGGSG 1223
>AE014298-1456|AAF46591.4| 2309|Drosophila melanogaster CG17255-PA,
isoform A protein.
Length = 2309
Score = 28.7 bits (61), Expect = 9.6
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Frame = +1
Query: 178 RSPPRSEPG*GRGATTVNTTTRRRG-SPQGTPSRRSLRG-------ESKALKRRPPRYGS 333
RSP S G GA + + G SP+G PSRR G + +R+P GS
Sbjct: 1158 RSPKES----GNGAPNSGASANKAGFSPRGEPSRRGRGGLSSGGGASASCYRRQPVGTGS 1213
Query: 334 PTGRPDGAAG 363
G G +G
Sbjct: 1214 AGGSGSGGSG 1223
>AE014297-4228|AAF56784.1| 281|Drosophila melanogaster CG14065-PA
protein.
Length = 281
Score = 28.7 bits (61), Expect = 9.6
Identities = 31/102 (30%), Positives = 39/102 (38%), Gaps = 4/102 (3%)
Frame = +1
Query: 256 PQGTPSRR---SLRGESKALKRRPPRYGSPTGRPDGAAGVPEYPAGP-QPACRVGTRCAV 423
PQ RR S E K+++ R PR GSP GAAG AG A G +
Sbjct: 154 PQQAGGRRVPGSSDTERKSVRPRAPRGGSPRKSAAGAAGAAGSNAGAVSSAVPGGPKVHK 213
Query: 424 DRSLYLLHGSAPRGLTPSGHPLTFTGGCRYLQELGRTGGCIP 549
DR ++ G SG+ G + E G G P
Sbjct: 214 DRK-DTSPSASIEGAGSSGNEAKSADGDQQAGEKGAAGAAPP 254
>AE014297-3576|AAF56315.1| 647|Drosophila melanogaster CG13625-PA
protein.
Length = 647
Score = 28.7 bits (61), Expect = 9.6
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +1
Query: 178 RSPPRSEPG*GRGATTVNTTTRRRGSPQGTPSRRSLRGESKALKRRPPRYGSPTGR 345
+SPPR G + T RRR S Q P RR + +RR + +P R
Sbjct: 230 QSPPRKRTG------KASPTRRRRDSDQSPPRRRRSNSDQSPPRRRRDKDSTPPRR 279
>AE014297-1011|AAF54430.1| 857|Drosophila melanogaster CG8374-PA
protein.
Length = 857
Score = 28.7 bits (61), Expect = 9.6
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 9/103 (8%)
Frame = +1
Query: 142 TKRLLCTLTPDVRSPPRSEPG*GRGATTVNTTTRRRGSPQGTPSRRSLRGESKALKR--R 315
T+ + C +PDV + R PG + ++ S G P + S+ + +++ R
Sbjct: 4 TRPVPCVPSPDVNTATRRNPGRPK-KQSIGADLSTTISKPGRPKKLSIGADLTTIRKPGR 62
Query: 316 PPRYGS-------PTGRPDGAAGVPEYPAGPQPACRVGTRCAV 423
P + G+ GRP + A +P CR+ +C V
Sbjct: 63 PKKLGADLTTIIRKPGRPTKLSNKQSLTALNEPECRI-RKCVV 104
>AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB,
isoform B protein.
Length = 3241
Score = 28.7 bits (61), Expect = 9.6
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = +3
Query: 147 TTPLHSYTRRPIPSEVRTRMR*GGYHG*HYNQTARLTPRYAQPTEPSRRIEGSETSAASV 326
TTP H ++ P+ Y+G Y Q A + PTEP + G+ +V
Sbjct: 2213 TTPAHQQQQQRTPNNQ--------YNGTIYPQLAGIMHPQTTPTEPPSSLYGNGGVGGAV 2264
Query: 327 RQPD-GPPRRCRWCPGIPRWTTT 392
+ PP + PG P TT
Sbjct: 2265 QSTTLPPPAQVNQYPGTPYSATT 2287
>AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA,
isoform A protein.
Length = 3201
Score = 28.7 bits (61), Expect = 9.6
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = +3
Query: 147 TTPLHSYTRRPIPSEVRTRMR*GGYHG*HYNQTARLTPRYAQPTEPSRRIEGSETSAASV 326
TTP H ++ P+ Y+G Y Q A + PTEP + G+ +V
Sbjct: 2173 TTPAHQQQQQRTPNNQ--------YNGTIYPQLAGIMHPQTTPTEPPSSLYGNGGVGGAV 2224
Query: 327 RQPD-GPPRRCRWCPGIPRWTTT 392
+ PP + PG P TT
Sbjct: 2225 QSTTLPPPAQVNQYPGTPYSATT 2247
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,532,364
Number of Sequences: 53049
Number of extensions: 975486
Number of successful extensions: 4474
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 3795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4456
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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