Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_G12
(793 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.008
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.008
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.008
Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical pr... 33 0.23
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 33 0.23
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 31 0.71
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 31 0.71
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 30 2.2
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 29 2.9
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 29 2.9
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 29 2.9
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 29 3.8
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 29 3.8
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 29 3.8
U23521-2|AAC46815.2| 316|Caenorhabditis elegans Hypothetical pr... 29 3.8
U23521-1|ABD63220.1| 348|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 29 3.8
AC006610-7|AAK85451.1| 392|Caenorhabditis elegans Hypothetical ... 29 5.0
Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical pr... 28 8.8
U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated p... 28 8.8
U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated p... 28 8.8
U40797-6|AAB37547.1| 235|Caenorhabditis elegans Hypothetical pr... 28 8.8
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 28 8.8
U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein. 28 8.8
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 28 8.8
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical
protein C15A11.1 protein.
Length = 303
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/69 (36%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
Frame = +1
Query: 187 PRSEPG*GRGATTVNTTTRRRGSPQGTPSRRSLRGESKALKRRPPRYGSPTGRP--DGAA 360
P +PG A T +T P G P GE A PP P G P DG A
Sbjct: 167 PNGQPG---AAGTTSTNEPGSPGPAGPPGPAGPAGEDAAAPESPPGPPGPPGPPGKDGEA 223
Query: 361 GVPEYPAGP 387
G P P GP
Sbjct: 224 GAPGAPGGP 232
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.9 bits (84), Expect = 0.008
Identities = 33/115 (28%), Positives = 42/115 (36%), Gaps = 4/115 (3%)
Frame = +1
Query: 160 TLTPDVRSPPRSEPG*GRGATTVNTTTRR---RGSPQGTPSRRSLRGESKALKRRPPRYG 330
T +P PPR PG ++ + R RG P+G P + S + R PR
Sbjct: 351 TGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRS 410
Query: 331 SPTGR-PDGAAGVPEYPAGPQPACRVGTRCAVDRSLYLLHGSAPRGLTPSGHPLT 492
PTG P G+ P G P T R P G P+G P T
Sbjct: 411 PPTGSPPTGSPPTGRPPRGSPPTGSPPTGLP-SRQKRQAPEDRPTGSPPTGSPPT 464
Score = 31.9 bits (69), Expect = 0.54
Identities = 35/108 (32%), Positives = 39/108 (36%), Gaps = 1/108 (0%)
Frame = +1
Query: 166 TPDVRSPPRSEPG*GRGATTVNTTTRRRGSPQGTPSRRSLRGESKALKRRPPRYGSPTGR 345
+P SPP P GR T P G PSR+ + PP PTGR
Sbjct: 410 SPPTGSPPTGSPPTGRPPRGSPPTG---SPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGR 466
Query: 346 PD-GAAGVPEYPAGPQPACRVGTRCAVDRSLYLLHGSAPRGLTPSGHP 486
P G G E R G R RS GS P G P+G P
Sbjct: 467 PHRGGPGKSE-----SSESREGPR-GPRRSPPT--GSPPTGSPPTGAP 506
Score = 27.9 bits (59), Expect = 8.8
Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Frame = -3
Query: 479 PEGVXPRGALPWSK*SDRSTAHRVPTRQAGCGPAGYSGTPAAPSGRP-VGLPYRGG---- 315
P G P G P S +P+RQ P T + P+G P G P+RGG
Sbjct: 417 PTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRP-TGSPPTGSPPTGRPHRGGPGKS 475
Query: 314 RRFRAFDSPRRLRRLGVPWGEP 249
+ + PR RR P G P
Sbjct: 476 ESSESREGPRGPRR-SPPTGSP 496
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.9 bits (84), Expect = 0.008
Identities = 33/115 (28%), Positives = 42/115 (36%), Gaps = 4/115 (3%)
Frame = +1
Query: 160 TLTPDVRSPPRSEPG*GRGATTVNTTTRR---RGSPQGTPSRRSLRGESKALKRRPPRYG 330
T +P PPR PG ++ + R RG P+G P + S + R PR
Sbjct: 372 TGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRS 431
Query: 331 SPTGR-PDGAAGVPEYPAGPQPACRVGTRCAVDRSLYLLHGSAPRGLTPSGHPLT 492
PTG P G+ P G P T R P G P+G P T
Sbjct: 432 PPTGSPPTGSPPTGRPPRGSPPTGSPPTGLP-SRQKRQAPEDRPTGSPPTGSPPT 485
Score = 31.9 bits (69), Expect = 0.54
Identities = 35/108 (32%), Positives = 39/108 (36%), Gaps = 1/108 (0%)
Frame = +1
Query: 166 TPDVRSPPRSEPG*GRGATTVNTTTRRRGSPQGTPSRRSLRGESKALKRRPPRYGSPTGR 345
+P SPP P GR T P G PSR+ + PP PTGR
Sbjct: 431 SPPTGSPPTGSPPTGRPPRGSPPTG---SPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGR 487
Query: 346 PD-GAAGVPEYPAGPQPACRVGTRCAVDRSLYLLHGSAPRGLTPSGHP 486
P G G E R G R RS GS P G P+G P
Sbjct: 488 PHRGGPGKSE-----SSESREGPR-GPRRSPPT--GSPPTGSPPTGAP 527
Score = 27.9 bits (59), Expect = 8.8
Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Frame = -3
Query: 479 PEGVXPRGALPWSK*SDRSTAHRVPTRQAGCGPAGYSGTPAAPSGRP-VGLPYRGG---- 315
P G P G P S +P+RQ P T + P+G P G P+RGG
Sbjct: 438 PTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRP-TGSPPTGSPPTGRPHRGGPGKS 496
Query: 314 RRFRAFDSPRRLRRLGVPWGEP 249
+ + PR RR P G P
Sbjct: 497 ESSESREGPRGPRR-SPPTGSP 517
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.9 bits (84), Expect = 0.008
Identities = 33/115 (28%), Positives = 42/115 (36%), Gaps = 4/115 (3%)
Frame = +1
Query: 160 TLTPDVRSPPRSEPG*GRGATTVNTTTRR---RGSPQGTPSRRSLRGESKALKRRPPRYG 330
T +P PPR PG ++ + R RG P+G P + S + R PR
Sbjct: 357 TGSPPTGRPPRGGPGKSSEESSESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPRRS 416
Query: 331 SPTGR-PDGAAGVPEYPAGPQPACRVGTRCAVDRSLYLLHGSAPRGLTPSGHPLT 492
PTG P G+ P G P T R P G P+G P T
Sbjct: 417 PPTGSPPTGSPPTGRPPRGSPPTGSPPTGLP-SRQKRQAPEDRPTGSPPTGSPPT 470
Score = 31.9 bits (69), Expect = 0.54
Identities = 35/108 (32%), Positives = 39/108 (36%), Gaps = 1/108 (0%)
Frame = +1
Query: 166 TPDVRSPPRSEPG*GRGATTVNTTTRRRGSPQGTPSRRSLRGESKALKRRPPRYGSPTGR 345
+P SPP P GR T P G PSR+ + PP PTGR
Sbjct: 416 SPPTGSPPTGSPPTGRPPRGSPPTG---SPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGR 472
Query: 346 PD-GAAGVPEYPAGPQPACRVGTRCAVDRSLYLLHGSAPRGLTPSGHP 486
P G G E R G R RS GS P G P+G P
Sbjct: 473 PHRGGPGKSE-----SSESREGPR-GPRRSPPT--GSPPTGSPPTGAP 512
Score = 27.9 bits (59), Expect = 8.8
Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Frame = -3
Query: 479 PEGVXPRGALPWSK*SDRSTAHRVPTRQAGCGPAGYSGTPAAPSGRP-VGLPYRGG---- 315
P G P G P S +P+RQ P T + P+G P G P+RGG
Sbjct: 423 PTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRP-TGSPPTGSPPTGRPHRGGPGKS 481
Query: 314 RRFRAFDSPRRLRRLGVPWGEP 249
+ + PR RR P G P
Sbjct: 482 ESSESREGPRGPRR-SPPTGSP 502
>Z81122-3|CAB54313.1| 1076|Caenorhabditis elegans Hypothetical
protein T13F2.3b protein.
Length = 1076
Score = 33.1 bits (72), Expect = 0.23
Identities = 22/70 (31%), Positives = 31/70 (44%)
Frame = +1
Query: 187 PRSEPG*GRGATTVNTTTRRRGSPQGTPSRRSLRGESKALKRRPPRYGSPTGRPDGAAGV 366
PR+ PG T T +R PQGT + + + P + +PTG+P G G+
Sbjct: 291 PRTTPGSAGPGTGPPGTPQRPQYPQGT----NPQPQQAQFTYPPTQQMTPTGQPPGYPGM 346
Query: 367 PEYPAGPQPA 396
P P PA
Sbjct: 347 PGTPTFSSPA 356
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = +1
Query: 199 PG*GRGATTVNTTTRRRGSPQGTPSRRSLRGESKALKRRPPRYGSPTGRPDGAAGVPEYP 378
PG R +T T + G+P ++ GES A + P G P G P+
Sbjct: 85 PGSQRSST--GTPNHQMGNPPQHQQQQFFHGESPAHSQGTPMTPQSAGMPGSNCGTPQSA 142
Query: 379 AGP 387
GP
Sbjct: 143 GGP 145
>Z81122-2|CAB03354.1| 1074|Caenorhabditis elegans Hypothetical
protein T13F2.3a protein.
Length = 1074
Score = 33.1 bits (72), Expect = 0.23
Identities = 22/70 (31%), Positives = 31/70 (44%)
Frame = +1
Query: 187 PRSEPG*GRGATTVNTTTRRRGSPQGTPSRRSLRGESKALKRRPPRYGSPTGRPDGAAGV 366
PR+ PG T T +R PQGT + + + P + +PTG+P G G+
Sbjct: 289 PRTTPGSAGPGTGPPGTPQRPQYPQGT----NPQPQQAQFTYPPTQQMTPTGQPPGYPGM 344
Query: 367 PEYPAGPQPA 396
P P PA
Sbjct: 345 PGTPTFSSPA 354
Score = 31.1 bits (67), Expect = 0.94
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Frame = +1
Query: 136 PPTKRLLCTLTP-DVRSPPRSEPG*GRGATTVNTTTRRRGSPQGTPSRRSLRGESKALKR 312
P T + T++P ++ PG R +T T + G+P ++ GES A +
Sbjct: 61 PQTWQRTPTMSPANIFQGGSGTPGSQRSST--GTPNHQMGNPPQHQQQQFFHGESPAHSQ 118
Query: 313 RPPRYGSPTGRPDGAAGVPEYPAGP 387
P G P G P+ GP
Sbjct: 119 GTPMTPQSAGMPGSNCGTPQSAGGP 143
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 33.1 bits (72), Expect = 0.23
Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Frame = +1
Query: 136 PPTKRLLCTLTPDVRSPPRSEPG*GRGATTVNTTTRRRGSPQGTPSR--RSLRGESKALK 309
PP + + TP P+ G G + + GSP P+ + L GE A
Sbjct: 221 PPPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNA-S 279
Query: 310 RRPPRYGSPTGRPDGAAGVPE 372
RRPP TG P G PE
Sbjct: 280 RRPPPPPKGTGTPPPPTGEPE 300
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 31.5 bits (68), Expect = 0.71
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +1
Query: 262 GTPSRRSLRGESKALKRRPPRYGSPTGRPDGAAGV-PEYPAGP 387
G+P RS+ A PP P G P G +G P PAGP
Sbjct: 161 GSPGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPGPAGPAGP 203
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 31.5 bits (68), Expect = 0.71
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +1
Query: 262 GTPSRRSLRGESKALKRRPPRYGSPTGRPDGAAGV-PEYPAGP 387
G+P RS+ A PP P G P G +G P PAGP
Sbjct: 161 GSPGTRSISSPGPAGPAGPPGPPGPDGAPGGGSGPGPAGPAGP 203
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 31.5 bits (68), Expect = 0.71
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -3
Query: 386 GPAGYSGTPAAPS--GRPVGLPYRGGRRFRAFDSP 288
GPAG +G+P P G P G P RGG+R R P
Sbjct: 173 GPAGDAGSPGQPGHPGSP-GNPGRGGQRSRGLPGP 206
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 29.9 bits (64), Expect = 2.2
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Frame = +1
Query: 181 SPPRSEPG*GRGATTVNTTTRRRGSP-----QGTPSRRSLRGESKALKRRPPRYGSPTGR 345
+P + G G GA +RG+P G+P R + +S++ P + G P G
Sbjct: 177 APGQPGHGGGSGAPGPAGPKGQRGAPGHPGQAGSPGRPGVDAQSQSNPGAPGQAG-PQG- 234
Query: 346 PDGAAGVPEYPAGP 387
P G +G P P GP
Sbjct: 235 PPGPSGAPGAPGGP 248
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = -3
Query: 395 AGC---GPAGYSGTPAAPSGRPVGLPYRGG 315
+GC GPAG SG P P GRP G P GG
Sbjct: 107 SGCCLPGPAGPSGAPGKP-GRP-GRPGAGG 134
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = -3
Query: 410 VPTRQAGCGPAGYSGTPAAP--SGRP--VGLPYRGGRRFRAFDS 291
VP + CG GY G P AP +G P GLP G++ R+ D+
Sbjct: 1096 VPGLEGDCGEDGYPGAPGAPGSNGYPGERGLPGVPGQQGRSGDN 1139
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = -3
Query: 410 VPTRQAGCGPAGYSGTPAAP--SGRP--VGLPYRGGRRFRAFDS 291
VP + CG GY G P AP +G P GLP G++ R+ D+
Sbjct: 1353 VPGLEGDCGEDGYPGAPGAPGSNGYPGERGLPGVPGQQGRSGDN 1396
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = -3
Query: 410 VPTRQAGCGPAGYSGTPAAP--SGRP--VGLPYRGGRRFRAFDS 291
VP + CG GY G P AP +G P GLP G++ R+ D+
Sbjct: 1352 VPGLEGDCGEDGYPGAPGAPGSNGYPGERGLPGVPGQQGRSGDN 1395
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 29.5 bits (63), Expect = 2.9
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = +1
Query: 172 DVRSPPRSEPG*GRGATTVNTTTRRRGSP-----QGTPSRRSLRGESKALKRRPPRYGSP 336
D +P + G G GA +RG+P G P + + +S++ P + G P
Sbjct: 153 DAGAPGQPGFGSGFGAPGPAGPKGQRGAPGHPGQAGAPGQPGVDAQSQSTPGAPGQAG-P 211
Query: 337 TGRPDGAAGVPEYPAGP 387
G P G++G P P GP
Sbjct: 212 QG-PPGSSGAPGAPGGP 227
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 307 KRRPPRYGSPTGRPDGAAGVPEYPAGPQ 390
KR PP G+P P+GA P P P+
Sbjct: 978 KRNPPPLGAPPKVPEGARAPPPLPPRPK 1005
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 307 KRRPPRYGSPTGRPDGAAGVPEYPAGPQ 390
KR PP G+P P+GA P P P+
Sbjct: 978 KRNPPPLGAPPKVPEGARAPPPLPPRPK 1005
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 307 KRRPPRYGSPTGRPDGAAGVPEYPAGPQ 390
KR PP G+P P+GA P P P+
Sbjct: 978 KRNPPPLGAPPKVPEGARAPPPLPPRPK 1005
>U23521-2|AAC46815.2| 316|Caenorhabditis elegans Hypothetical
protein F41C3.8a protein.
Length = 316
Score = 29.1 bits (62), Expect = 3.8
Identities = 27/90 (30%), Positives = 35/90 (38%)
Frame = -3
Query: 587 RTDPSPSSQGPEAGIHPPVRPSSCR*RHPPVKVKG*PEGVXPRGALPWSK*SDRSTAHRV 408
R D S S P + + P+ PSS +HP P PRG+ ++ S ST RV
Sbjct: 19 RVDMSSSGSTPVSKVETPILPSSSMSQHP-------PNNPFPRGSQSYN--SSGSTPLRV 69
Query: 407 PTRQAGCGPAGYSGTPAAPSGRPVGLPYRG 318
T + P P RPV G
Sbjct: 70 NTSNRSSANSQRPLLP--PQDRPVRFQTNG 97
>U23521-1|ABD63220.1| 348|Caenorhabditis elegans Hypothetical
protein F41C3.8b protein.
Length = 348
Score = 29.1 bits (62), Expect = 3.8
Identities = 27/90 (30%), Positives = 35/90 (38%)
Frame = -3
Query: 587 RTDPSPSSQGPEAGIHPPVRPSSCR*RHPPVKVKG*PEGVXPRGALPWSK*SDRSTAHRV 408
R D S S P + + P+ PSS +HP P PRG+ ++ S ST RV
Sbjct: 51 RVDMSSSGSTPVSKVETPILPSSSMSQHP-------PNNPFPRGSQSYN--SSGSTPLRV 101
Query: 407 PTRQAGCGPAGYSGTPAAPSGRPVGLPYRG 318
T + P P RPV G
Sbjct: 102 NTSNRSSANSQRPLLP--PQDRPVRFQTNG 129
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = -3
Query: 386 GPAGYSGTPAAPS--GRPVGLPYRGGRRFR 303
GPAG +G+P P G P G P RGG+R R
Sbjct: 173 GPAGDAGSPGQPGHPGSP-GNPGRGGQRSR 201
>AC006610-7|AAK85451.1| 392|Caenorhabditis elegans Hypothetical
protein C30F12.5 protein.
Length = 392
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 149 DSSALLHPTSDPLRGQNPDEVGGLPRLTLQPDGAAHPKVRPA 274
D + HP PL +P G +PR L P+GA P + P+
Sbjct: 319 DEPRIGHPLYSPLPPIDPT-YGTIPRARLAPNGAPPPPLSPS 359
>Z82268-5|CAB05195.1| 304|Caenorhabditis elegans Hypothetical
protein F52B11.4 protein.
Length = 304
Score = 27.9 bits (59), Expect = 8.8
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Frame = +1
Query: 172 DVRSPPRSEPG*GRGATTVNTTTRRRGSP-----QGTPSRRSLRGESKALKRRPPRYGSP 336
D +P G G GA G+P G P + +S+++ P + G P
Sbjct: 169 DAGAPGAPGQGSGAGAPGPAGPKGASGAPGNPGQAGAPGQPGADAQSESIPGAPGQAG-P 227
Query: 337 TGRPDGAAGVPEYPAGP-QP 393
G P G AG P P GP QP
Sbjct: 228 QG-PPGPAGSPGAPGGPGQP 246
>U50071-8|AAV34806.1| 795|Caenorhabditis elegans Uncoordinated
protein 44, isoform d protein.
Length = 795
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 208 GRGATTVNTTTRRRGSPQGTPSRRSLRGESKALKRRPPRYGS 333
G TT TT+ SP G+P+RRS+ E + GS
Sbjct: 753 GTIVTTTVTTSHISESPSGSPTRRSVEPEEHRHSQHEDHEGS 794
>U50071-7|AAV34805.1| 905|Caenorhabditis elegans Uncoordinated
protein 44, isoform b protein.
Length = 905
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 208 GRGATTVNTTTRRRGSPQGTPSRRSLRGESKALKRRPPRYGS 333
G TT TT+ SP G+P+RRS+ E + GS
Sbjct: 863 GTIVTTTVTTSHISESPSGSPTRRSVEPEEHRHSQHEDHEGS 904
>U40797-6|AAB37547.1| 235|Caenorhabditis elegans Hypothetical
protein C28C12.4 protein.
Length = 235
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 386 GPAGYSGTPAAPSGRPVGLPYRGG 315
GP G G P P GR +G RGG
Sbjct: 164 GPGGRHGGPGGPGGRRMGPGGRGG 187
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 208 GRGATTVNTTTRRRGSPQGTPSRRSLRGESKALKRRPPRYGS 333
G TT TT+ SP G+P+RRS+ E + GS
Sbjct: 1773 GTIVTTTVTTSHISESPSGSPTRRSVEPEEHRHSQHEDHEGS 1814
>U21731-1|AAA85852.1| 985|Caenorhabditis elegans UNC-44 protein.
Length = 985
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 208 GRGATTVNTTTRRRGSPQGTPSRRSLRGESKALKRRPPRYGS 333
G TT TT+ SP G+P+RRS+ E + GS
Sbjct: 943 GTIVTTTVTTSHISESPSGSPTRRSVEPEEHRHSQHEDHEGS 984
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -3
Query: 392 GCGPAGYSGTPAAPSGRPVGLPYRGGRRFRAFDSPRR 282
G GP G SG P G G +RGGR P+R
Sbjct: 83 GVGPRGPSGRPLQDGGDHRGGDFRGGRGGGRGGGPQR 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,041,275
Number of Sequences: 27780
Number of extensions: 441655
Number of successful extensions: 1831
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1782
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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