Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_G11
         (792 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456346-1|CAG30232.1|  352|Homo sapiens Em:AC004832.5 protein.        31   3.6  
BC139912-1|AAI39913.1|  360|Homo sapiens SEC14L4 protein protein.      31   3.6  
AY158085-1|AAO21869.1|  406|Homo sapiens SEC14p-like protein TAP...    31   3.6  
AC004832-4|AAF19259.1|  406|Homo sapiens WUGSC:H_DJ0539M06.4 pro...    31   3.6  
BC104008-1|AAI04009.1|  127|Homo sapiens chromosome 6 open readi...    31   4.8  
BC104007-1|AAI04008.1|  127|Homo sapiens chromosome 6 open readi...    31   4.8  
AL138876-1|CAI12219.1|  127|Homo sapiens RP11-145H9.2 protein.         31   4.8  
AK056496-1|BAB71197.1|  127|Homo sapiens protein ( Homo sapiens ...    31   4.8  

>CR456346-1|CAG30232.1|  352|Homo sapiens Em:AC004832.5 protein.
          Length = 352

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = -1

Query: 669 VTKWIFVIDQKNIQYVRVRSVGCDGSVQCGAE---PGPVARWKLA 544
           V K  ++ +Q  +QY   RSVG   S+Q   E   PG V RW+ A
Sbjct: 210 VPKSYYLCEQVRLQYEHTRSVGRGSSLQVENEILFPGCVLRWQFA 254


>BC139912-1|AAI39913.1|  360|Homo sapiens SEC14L4 protein protein.
          Length = 360

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = -1

Query: 669 VTKWIFVIDQKNIQYVRVRSVGCDGSVQCGAE---PGPVARWKLA 544
           V K  ++ +Q  +QY   RSVG   S+Q   E   PG V RW+ A
Sbjct: 264 VPKSYYLCEQVRLQYEHTRSVGRGSSLQVENEILFPGCVLRWQFA 308


>AY158085-1|AAO21869.1|  406|Homo sapiens SEC14p-like protein TAP3
           protein.
          Length = 406

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = -1

Query: 669 VTKWIFVIDQKNIQYVRVRSVGCDGSVQCGAE---PGPVARWKLA 544
           V K  ++ +Q  +QY   RSVG   S+Q   E   PG V RW+ A
Sbjct: 264 VPKSYYLCEQVRLQYEHTRSVGRGSSLQVENEILFPGCVLRWQFA 308


>AC004832-4|AAF19259.1|  406|Homo sapiens WUGSC:H_DJ0539M06.4
           protein.
          Length = 406

 Score = 31.5 bits (68), Expect = 3.6
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = -1

Query: 669 VTKWIFVIDQKNIQYVRVRSVGCDGSVQCGAE---PGPVARWKLA 544
           V K  ++ +Q  +QY   RSVG   S+Q   E   PG V RW+ A
Sbjct: 264 VPKSYYLCEQVRLQYEHTRSVGRGSSLQVENEILFPGCVLRWQFA 308


>BC104008-1|AAI04009.1|  127|Homo sapiens chromosome 6 open reading
           frame 195 protein.
          Length = 127

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = +2

Query: 509 GASPE-RHLEHRHASFHLATGPGSAPHWTEPSHPTLLTRTYCIFFWSITKIHF 664
           GA P  R L+H    + L + PGS    T PS P       C   WSI+   F
Sbjct: 40  GARPALRGLQHASDCYRLLSPPGSGLVGTNPSVPAPSPHCGCCQAWSISSFTF 92


>BC104007-1|AAI04008.1|  127|Homo sapiens chromosome 6 open reading
           frame 195 protein.
          Length = 127

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = +2

Query: 509 GASPE-RHLEHRHASFHLATGPGSAPHWTEPSHPTLLTRTYCIFFWSITKIHF 664
           GA P  R L+H    + L + PGS    T PS P       C   WSI+   F
Sbjct: 40  GARPALRGLQHASDCYRLLSPPGSGLVGTNPSVPAPSPHCGCCQAWSISSFTF 92


>AL138876-1|CAI12219.1|  127|Homo sapiens RP11-145H9.2 protein.
          Length = 127

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = +2

Query: 509 GASPE-RHLEHRHASFHLATGPGSAPHWTEPSHPTLLTRTYCIFFWSITKIHF 664
           GA P  R L+H    + L + PGS    T PS P       C   WSI+   F
Sbjct: 40  GARPALRGLQHASDCYRLLSPPGSGLVGTNPSVPAPSPHCGCCQAWSISSFTF 92


>AK056496-1|BAB71197.1|  127|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31934 fis, clone NT2RP7006374. ).
          Length = 127

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
 Frame = +2

Query: 509 GASPE-RHLEHRHASFHLATGPGSAPHWTEPSHPTLLTRTYCIFFWSITKIHF 664
           GA P  R L+H    + L + PGS    T PS P       C   WSI+   F
Sbjct: 40  GARPALRGLQHASDCYRLLSPPGSGLVGTNPSVPAPSPHCGCCRAWSISSFTF 92


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,599,657
Number of Sequences: 237096
Number of extensions: 1413481
Number of successful extensions: 4214
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4213
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)