Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_G06
         (795 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0405 - 17767303-17767665,17767815-17768039,17768115-177683...   189   3e-48
02_01_0487 + 3503003-3503037,3505802-3505833,3506012-3506127,350...    30   1.8  
04_03_1018 + 21753634-21753640,21754282-21754315,21754413-217544...    28   7.4  
11_04_0354 + 16697571-16700256,16700335-16700759                       28   9.8  
02_04_0096 + 19669428-19669525,19670770-19670818,19671041-196711...    28   9.8  

>07_03_0405 -
           17767303-17767665,17767815-17768039,17768115-17768342,
           17768607-17768621,17768622-17768810,17769106-17769213,
           17769917-17770045
          Length = 418

 Score =  189 bits (460), Expect = 3e-48
 Identities = 93/150 (62%), Positives = 109/150 (72%)
 Frame = -3

Query: 580 GRHHVLNWMMFGQNGAEIVFNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYE 401
           GRHH LNW+ FG NGAEIVFNPSAT+ GE  SE MW +EARNAAI N YF  +INRVG E
Sbjct: 262 GRHHPLNWLAFGLNGAEIVFNPSATV-GEL-SEPMWPIEARNAAIANSYFVGSINRVGTE 319

Query: 400 EFPNEFTSADGKPAHKDLGLFYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRD 221
            FPN FTS DGKP H D G FYGSS+F  PD    P LSR RDGL+I+ +DLNL RQI+D
Sbjct: 320 VFPNPFTSGDGKPQHADFGHFYGSSHFSAPDASCTPSLSRYRDGLMISDMDLNLCRQIKD 379

Query: 220 RRCYYMTQRLXMYVNSLSKVLELDYKPQVV 131
           +  + MT R   Y + LS+ L+ D+KPQV+
Sbjct: 380 KWGFRMTARYDTYASLLSEYLKPDFKPQVI 409



 Score = 27.9 bits (59), Expect = 9.8
 Identities = 14/25 (56%), Positives = 15/25 (60%)
 Frame = -1

Query: 696 HXXGVGRF*RIQSTTMEGNTGHPVF 622
           H   VG F    +  MEGNTGHPVF
Sbjct: 225 HIPRVGDF-NESTYYMEGNTGHPVF 248


>02_01_0487 +
           3503003-3503037,3505802-3505833,3506012-3506127,
           3506227-3506437,3506555-3506792,3507075-3507252,
           3507962-3508079,3508167-3508373,3509134-3509234
          Length = 411

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 21/64 (32%), Positives = 32/64 (50%)
 Frame = -3

Query: 523 FNPSATIAGEGGSEYMWNVEARNAAITNCYFTAAINRVGYEEFPNEFTSADGKPAHKDLG 344
           F+PS  I GEGG   ++  + RN  +      +  +R G +EF NE   A    +H++L 
Sbjct: 45  FSPSNKI-GEGGFGSVYKGKLRNGKLVAVKVLSLESRQGAKEFLNEL-MAISNVSHENLV 102

Query: 343 LFYG 332
             YG
Sbjct: 103 KLYG 106


>04_03_1018 +
           21753634-21753640,21754282-21754315,21754413-21754432,
           21754485-21755782
          Length = 452

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = +2

Query: 266 QAVSGAGQTGAPNAVGAAEVARSVEQAQVFVCRFPVSRSELVRELLVXDSVDGRCEVAV 442
           +  SG      P+A+ A E   + E  ++ V R P     LVR + + +S +   E AV
Sbjct: 342 KCASGGCAGAVPSALAAVEALAASEAGRMAVARAPGGTRALVRHVFMMNSSNDGSEHAV 400


>11_04_0354 + 16697571-16700256,16700335-16700759
          Length = 1036

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +2

Query: 197 LGHVITTSVSDLSVQVQVHGRD*QAVSGAGQTGAPNAVG 313
           LG V+ TSVS+LS Q+Q+       +SG    G  N VG
Sbjct: 331 LGGVLPTSVSNLSAQLQLLYVGFNKISGNIPFGISNLVG 369


>02_04_0096 +
           19669428-19669525,19670770-19670818,19671041-19671132,
           19671235-19671386,19671478-19671524,19671617-19671650,
           19671769-19671935,19672070-19672166,19672239-19672408
          Length = 301

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 6/125 (4%)
 Frame = -3

Query: 538 GAEIVFNPSATIAGEG-----GSEYMWNVEARNAAITNCYFTAAINRVGYEEFPNEFTSA 374
           GAEI+F P+A I  E       S   W    +  A  N     A NR+G E    E    
Sbjct: 176 GAEILFYPTA-IGSEPQDNNLDSREHWKRVMQGHAGANLVPLVASNRIGRETVETE---- 230

Query: 373 DGKPAHKDLGL-FYGSSYFCGPDGVRCPGLSRTRDGLLIAAVDLNLNRQIRDRRCYYMTQ 197
                H +  + F+G+S+  GP G      +   + +L+A  DL+  +  R     +  +
Sbjct: 231 -----HGESTITFFGNSFIAGPTGEIVKLANDKDEDVLVAEFDLDEIKSTRHGWGIFRDR 285

Query: 196 RLXMY 182
           R  +Y
Sbjct: 286 RPDLY 290


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,744,901
Number of Sequences: 37544
Number of extensions: 435897
Number of successful extensions: 1149
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)