Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_G05
         (831 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   0.86 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   3.5  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   8.0  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 25.0 bits (52), Expect = 0.86
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +2

Query: 53  SLNRSQHDAALPSTTPRQERKSST 124
           ++N+ Q   +   TTP++ERK++T
Sbjct: 776 NVNKEQSPNSTKETTPKKERKTAT 799


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 402 RTTGRSAECMNHMSETAVPLVL 467
           +  G+  +C N+MSE  V ++L
Sbjct: 170 KENGKEFDCHNYMSELTVDILL 191


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 55  SQQIAARRCSTEHNTPSGT 111
           S Q + +R STE   P+GT
Sbjct: 534 SGQTSVQRASTEFGIPTGT 552


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,745
Number of Sequences: 438
Number of extensions: 3716
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)