Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_G03
(999 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 40 0.004
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 40 0.004
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 38 0.011
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.045
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.045
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.045
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 36 0.060
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 32 0.56
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 0.56
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 31 1.7
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 31 1.7
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 31 1.7
Z54236-6|CAA90981.3| 465|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF068719-7|AAO21425.1| 399|Caenorhabditis elegans Uncoordinated... 29 5.2
AF068719-6|AAV58864.1| 457|Caenorhabditis elegans Uncoordinated... 29 5.2
AF068719-5|AAC17781.1| 458|Caenorhabditis elegans Uncoordinated... 29 5.2
AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical ... 29 5.2
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.8
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 6.8
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 9.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 9.1
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 39.5 bits (88), Expect = 0.004
Identities = 31/116 (26%), Positives = 34/116 (29%), Gaps = 3/116 (2%)
Frame = +2
Query: 653 PPPQXXXRXPTXQGPXGXTPPQXRTPPXXTQNQDXPXPXQPPXTXPXPXTXXXKPTRXXX 832
PPP P G TP R PP + P P PP P P P
Sbjct: 266 PPPSVTPMPPPMPPTPGMTP---RPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322
Query: 833 XRGXAATXPGXTXAXXAXPPAXR---XSPXXPXPKXXRXXQPXNXXPPXXKPPEXP 991
R PG PP R P P P+ PP +PP P
Sbjct: 323 SR---FGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 375
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 39.5 bits (88), Expect = 0.004
Identities = 31/116 (26%), Positives = 34/116 (29%), Gaps = 3/116 (2%)
Frame = +2
Query: 653 PPPQXXXRXPTXQGPXGXTPPQXRTPPXXTQNQDXPXPXQPPXTXPXPXTXXXKPTRXXX 832
PPP P G TP R PP + P P PP P P P
Sbjct: 276 PPPSVTPMPPPMPPTPGMTP---RPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332
Query: 833 XRGXAATXPGXTXAXXAXPPAXR---XSPXXPXPKXXRXXQPXNXXPPXXKPPEXP 991
R PG PP R P P P+ PP +PP P
Sbjct: 333 SR---FGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPP 385
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 37.9 bits (84), Expect = 0.011
Identities = 41/190 (21%), Positives = 54/190 (28%), Gaps = 9/190 (4%)
Frame = +2
Query: 440 APXXXPRTPXXPPXKNPXXPQRG-EXXXTPRTXPXXNAKDPNXTADXXXXXXXXXXXXXX 616
AP P +P PP P P + P P ++DP + +
Sbjct: 94 APSDEP-SPSGPPSPGPVNPSEDPQPSGPPSPGPVDPSEDPQPSVEPSEDHQPSGPPSPG 152
Query: 617 RXXPXXRXQXXXPPPQXXX-RXPTXQGPXGXTP---PQXRTPPXXTQNQDXPXPXQPPXT 784
P Q P + P GP + P + P D P P PP
Sbjct: 153 PVDPSEDPQPSVEPSEDPQPSGPPSPGPVDPSEDPQPSGSSSPGPVDPSDEPSPSGPPSP 212
Query: 785 XPXPXTXXXKPTRXXXXRGXAAT---XPGXTXAXXAXP-PAXRXSPXXPXPKXXRXXQPX 952
P + KP+ + P P P R P P P R P
Sbjct: 213 GPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPP 272
Query: 953 NXXPPXXKPP 982
PP +PP
Sbjct: 273 G--PPTRRPP 280
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.9 bits (79), Expect = 0.045
Identities = 33/116 (28%), Positives = 36/116 (31%), Gaps = 6/116 (5%)
Frame = +2
Query: 653 PPPQXXXRXPTXQGPXGXTPP--QXRTPPXXTQNQDXP---XPXQPPXTXPXPXTXXXKP 817
PPP P G PP PP T + P P PP P P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 297
Query: 818 TRXXXXRGXAATXP-GXTXAXXAXPPAXRXSPXXPXPKXXRXXQPXNXXPPXXKPP 982
RG T A + PPA SP P P+ R Q PP PP
Sbjct: 298 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP-PPPPRQKR--QAPERSPPTGSPP 350
Score = 32.7 bits (71), Expect = 0.42
Identities = 23/110 (20%), Positives = 29/110 (26%)
Frame = +2
Query: 653 PPPQXXXRXPTXQGPXGXTPPQXRTPPXXTQNQDXPXPXQPPXTXPXPXTXXXKPTRXXX 832
PPP P PP +PP P P P P
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Query: 833 XRGXAATXPGXTXAXXAXPPAXRXSPXXPXPKXXRXXQPXNXXPPXXKPP 982
+ + P T + P R +P P P PP +PP
Sbjct: 315 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPP----TGSPPTGSPPTGRPP 360
Score = 29.1 bits (62), Expect = 5.2
Identities = 25/116 (21%), Positives = 33/116 (28%), Gaps = 6/116 (5%)
Frame = +2
Query: 653 PPPQXXXRXPTXQGPXGXTPPQX------RTPPXXTQNQDXPXPXQPPXTXPXPXTXXXK 814
PPPQ P PP+ R+PP + P +PP P +
Sbjct: 313 PPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESS 372
Query: 815 PTRXXXXRGXAATXPGXTXAXXAXPPAXRXSPXXPXPKXXRXXQPXNXXPPXXKPP 982
+R G G R P P + P PP +PP
Sbjct: 373 ESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPR-RSPPTGSPPTGSPPTGRPP 427
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.9 bits (79), Expect = 0.045
Identities = 33/116 (28%), Positives = 36/116 (31%), Gaps = 6/116 (5%)
Frame = +2
Query: 653 PPPQXXXRXPTXQGPXGXTPP--QXRTPPXXTQNQDXP---XPXQPPXTXPXPXTXXXKP 817
PPP P G PP PP T + P P PP P P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 318
Query: 818 TRXXXXRGXAATXP-GXTXAXXAXPPAXRXSPXXPXPKXXRXXQPXNXXPPXXKPP 982
RG T A + PPA SP P P+ R Q PP PP
Sbjct: 319 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP-PPPPRQKR--QAPERSPPTGSPP 371
Score = 32.7 bits (71), Expect = 0.42
Identities = 23/110 (20%), Positives = 29/110 (26%)
Frame = +2
Query: 653 PPPQXXXRXPTXQGPXGXTPPQXRTPPXXTQNQDXPXPXQPPXTXPXPXTXXXKPTRXXX 832
PPP P PP +PP P P P P
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Query: 833 XRGXAATXPGXTXAXXAXPPAXRXSPXXPXPKXXRXXQPXNXXPPXXKPP 982
+ + P T + P R +P P P PP +PP
Sbjct: 336 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPP----TGSPPTGSPPTGRPP 381
Score = 29.1 bits (62), Expect = 5.2
Identities = 25/116 (21%), Positives = 33/116 (28%), Gaps = 6/116 (5%)
Frame = +2
Query: 653 PPPQXXXRXPTXQGPXGXTPPQX------RTPPXXTQNQDXPXPXQPPXTXPXPXTXXXK 814
PPPQ P PP+ R+PP + P +PP P +
Sbjct: 334 PPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESS 393
Query: 815 PTRXXXXRGXAATXPGXTXAXXAXPPAXRXSPXXPXPKXXRXXQPXNXXPPXXKPP 982
+R G G R P P + P PP +PP
Sbjct: 394 ESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPR-RSPPTGSPPTGSPPTGRPP 448
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.045
Identities = 33/116 (28%), Positives = 36/116 (31%), Gaps = 6/116 (5%)
Frame = +2
Query: 653 PPPQXXXRXPTXQGPXGXTPP--QXRTPPXXTQNQDXP---XPXQPPXTXPXPXTXXXKP 817
PPP P G PP PP T + P P PP P P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSP 303
Query: 818 TRXXXXRGXAATXP-GXTXAXXAXPPAXRXSPXXPXPKXXRXXQPXNXXPPXXKPP 982
RG T A + PPA SP P P+ R Q PP PP
Sbjct: 304 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSP-PPPPRQKR--QAPERSPPTGSPP 356
Score = 32.7 bits (71), Expect = 0.42
Identities = 23/110 (20%), Positives = 29/110 (26%)
Frame = +2
Query: 653 PPPQXXXRXPTXQGPXGXTPPQXRTPPXXTQNQDXPXPXQPPXTXPXPXTXXXKPTRXXX 832
PPP P PP +PP P P P P
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Query: 833 XRGXAATXPGXTXAXXAXPPAXRXSPXXPXPKXXRXXQPXNXXPPXXKPP 982
+ + P T + P R +P P P PP +PP
Sbjct: 321 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPP----TGSPPTGSPPTGRPP 366
Score = 29.1 bits (62), Expect = 5.2
Identities = 25/116 (21%), Positives = 33/116 (28%), Gaps = 6/116 (5%)
Frame = +2
Query: 653 PPPQXXXRXPTXQGPXGXTPPQX------RTPPXXTQNQDXPXPXQPPXTXPXPXTXXXK 814
PPPQ P PP+ R+PP + P +PP P +
Sbjct: 319 PPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGKSSEESS 378
Query: 815 PTRXXXXRGXAATXPGXTXAXXAXPPAXRXSPXXPXPKXXRXXQPXNXXPPXXKPP 982
+R G G R P P + P PP +PP
Sbjct: 379 ESREGPRGGPRGGPRGGPRKSSEESSESREEPRGPR-RSPPTGSPPTGSPPTGRPP 433
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 35.5 bits (78), Expect = 0.060
Identities = 31/128 (24%), Positives = 39/128 (30%), Gaps = 5/128 (3%)
Frame = +2
Query: 617 RXXPXXRXQXXXPPPQXXXRXP-TXQGPXGXTPPQXRTPPXXTQ---NQDXPXP-XQPPX 781
R P PPP+ P T P PP R PP T+ P P QPP
Sbjct: 283 RTPPSSGTSAPQPPPRGSTAAPGTRAPPATRAPPATRAPPATTRAPPATTRPAPASQPPV 342
Query: 782 TXPXPXTXXXKPTRXXXXRGXAATXPGXTXAXXAXPPAXRXSPXXPXPKXXRXXQPXNXX 961
P + + P + + P SP P P +P
Sbjct: 343 REPETPDSGYPSPAPQEPAHPSPSYPSPSYPSPSYPSPSYPSPSYPSPSY--PAEPAYSV 400
Query: 962 PPXXKPPE 985
PP KP +
Sbjct: 401 PPPAKPEQ 408
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 32.3 bits (70), Expect = 0.56
Identities = 28/117 (23%), Positives = 31/117 (26%), Gaps = 7/117 (5%)
Frame = +2
Query: 653 PPPQXXXRXPTXQGPXGXTPPQXRTPPXXTQNQDXPXPXQPPXTXPXPXTXXXKPTRXXX 832
PPP+ P PP PP Q P P PP P P
Sbjct: 31 PPPKPAPYVEQSAQPQQTAPPP---PPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASY 87
Query: 833 XRGXA-------ATXPGXTXAXXAXPPAXRXSPXXPXPKXXRXXQPXNXXPPXXKPP 982
+ A P A PPA P P + P PP PP
Sbjct: 88 PQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPP 144
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.3 bits (70), Expect = 0.56
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +2
Query: 377 APXXRAQAXTXXXEERRXPRTAPXXXPRT-PXXPPXKNPXXPQR 505
+P R T +RR PRT P PR P PP P P R
Sbjct: 154 SPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPR 197
Score = 31.9 bits (69), Expect = 0.73
Identities = 18/52 (34%), Positives = 20/52 (38%), Gaps = 4/52 (7%)
Frame = +2
Query: 653 PPPQXXXRXPTXQGPXGXTPPQXRTPP----XXTQNQDXPXPXQPPXTXPXP 796
PPP R P + P PP TPP + P P PP T P P
Sbjct: 141 PPPPRVPRTPPPRSPPPRRPPM--TPPSPQRRPPRTPPSPEPRNPPRTPPSP 190
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/69 (28%), Positives = 23/69 (33%)
Frame = +2
Query: 653 PPPQXXXRXPTXQGPXGXTPPQXRTPPXXTQNQDXPXPXQPPXTXPXPXTXXXKPTRXXX 832
PPP R P P RTPP + P P +PP T P P +
Sbjct: 125 PPPPRKSRAGGSSPPPPPPPRVPRTPPPRS-----PPPRRPPMTPPSPQRRPPRTPPSPE 179
Query: 833 XRGXAATXP 859
R T P
Sbjct: 180 PRNPPRTPP 188
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 31.1 bits (67), Expect = 1.3
Identities = 35/169 (20%), Positives = 43/169 (25%), Gaps = 5/169 (2%)
Frame = +2
Query: 371 TPAPXXRAQAXTXXXEERRXPRTAPXXXPRTPXXPPXKN----PXXPQRGEXXXTPRTXP 538
T AP T + P+T PR P PP N P P+ P P
Sbjct: 182 TSAPHSSPNNRTSLYNPQPPPKTGYPTNPRVPYNPPQPNYTRQPTYPEDNRAPYKPTRSP 241
Query: 539 -XXNAKDPNXTADXXXXXXXXXXXXXXRXXPXXRXQXXXPPPQXXXRXPTXQGPXGXTPP 715
+ P+ D P P P G P
Sbjct: 242 NTPPPRQPSGGYDSDGQTPPSSPRIYNTRRPNNHGPGY--PEDQVPTAPPVPGQQRVPPT 299
Query: 716 QXRTPPXXTQNQDXPXPXQPPXTXPXPXTXXXKPTRXXXXRGXAATXPG 862
Q R PP T + P P T P+ G + PG
Sbjct: 300 QTRNPPNPTNTRQPSRPVPPTSDGHIEATTPYNPS-AQYPTGKRGSHPG 347
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 30.7 bits (66), Expect = 1.7
Identities = 26/104 (25%), Positives = 31/104 (29%), Gaps = 4/104 (3%)
Frame = +2
Query: 626 PXXRXQXXXPPPQXXXRXPTXQGPXGXTPPQXRTPPXXTQNQD----XPXPXQPPXTXPX 793
P + PP PT + P PP + PP T N++ P P P T P
Sbjct: 176 PPPTTKAPPPPTTKAPPPPTTKAPP---PPTTKAPPPPTTNKEVTTVAPVPKPAPVTAPA 232
Query: 794 PXTXXXKPTRXXXXRGXAATXPGXTXAXXAXPPAXRXSPXXPXP 925
P P T A A P P P P
Sbjct: 233 P-----NPPAPENTTAKVETTKPTKAAPPAPTPVPNPVPSPPPP 271
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/55 (36%), Positives = 21/55 (38%), Gaps = 6/55 (10%)
Frame = +2
Query: 626 PXXRXQXXXPPPQXXXRX----PTXQ--GPXGXTPPQXRTPPXXTQNQDXPXPXQ 772
P Q PPPQ P Q GP G PPQ + PP Q P P Q
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQ 727
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 30.7 bits (66), Expect = 1.7
Identities = 20/55 (36%), Positives = 21/55 (38%), Gaps = 6/55 (10%)
Frame = +2
Query: 626 PXXRXQXXXPPPQXXXRX----PTXQ--GPXGXTPPQXRTPPXXTQNQDXPXPXQ 772
P Q PPPQ P Q GP G PPQ + PP Q P P Q
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQ 727
>Z54236-6|CAA90981.3| 465|Caenorhabditis elegans Hypothetical
protein C27B7.6 protein.
Length = 465
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 653 PPPQXXXRXPTXQGPXGXTPPQXRTPPXXTQN 748
PPP R P+ P +PP R+PP T+N
Sbjct: 436 PPPP---RTPSPDAPLAQSPPIPRSPPSSTEN 464
>AF068719-7|AAO21425.1| 399|Caenorhabditis elegans Uncoordinated
protein 23, isoform b protein.
Length = 399
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/62 (27%), Positives = 21/62 (33%), Gaps = 3/62 (4%)
Frame = +2
Query: 641 QXXXPPPQXXXRXPTXQGPXGXTPPQXRT---PPXXTQNQDXPXPXQPPXTXPXPXTXXX 811
Q PPQ + P TPP + PP T+ P + P P P
Sbjct: 96 QQNQAPPQYSQQQPQQAQQRQTTPPSTKASSRPPSRTREPKEPEVPERPAVIPLPYEKKE 155
Query: 812 KP 817
KP
Sbjct: 156 KP 157
>AF068719-6|AAV58864.1| 457|Caenorhabditis elegans Uncoordinated
protein 23, isoform c protein.
Length = 457
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/62 (27%), Positives = 21/62 (33%), Gaps = 3/62 (4%)
Frame = +2
Query: 641 QXXXPPPQXXXRXPTXQGPXGXTPPQXRT---PPXXTQNQDXPXPXQPPXTXPXPXTXXX 811
Q PPQ + P TPP + PP T+ P + P P P
Sbjct: 154 QQNQAPPQYSQQQPQQAQQRQTTPPSTKASSRPPSRTREPKEPEVPERPAVIPLPYEKKE 213
Query: 812 KP 817
KP
Sbjct: 214 KP 215
>AF068719-5|AAC17781.1| 458|Caenorhabditis elegans Uncoordinated
protein 23, isoform a protein.
Length = 458
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/62 (27%), Positives = 21/62 (33%), Gaps = 3/62 (4%)
Frame = +2
Query: 641 QXXXPPPQXXXRXPTXQGPXGXTPPQXRT---PPXXTQNQDXPXPXQPPXTXPXPXTXXX 811
Q PPQ + P TPP + PP T+ P + P P P
Sbjct: 155 QQNQAPPQYSQQQPQQAQQRQTTPPSTKASSRPPSRTREPKEPEVPERPAVIPLPYEKKE 214
Query: 812 KP 817
KP
Sbjct: 215 KP 216
>AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical
protein Y50D4C.3 protein.
Length = 605
Score = 29.1 bits (62), Expect = 5.2
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 5/84 (5%)
Frame = +1
Query: 139 QRXKRAXXNXTAQXHGXTNHRXWRQXGPRXKXXGSRXE-----PXRSSRQXRXEKXRGAP 303
Q R+ + Q H N + ++Q P G++ P R + ++ G P
Sbjct: 422 QNSPRSFNQNSNQGHPRGNQKSFQQGAPHQTPRGNQGNFQQQGPPRGTGNYFFQQ--GPP 479
Query: 304 RTRRXXXSTXXGPPHXPPXXHXHP 375
R + + GPP PP H HP
Sbjct: 480 RGGQFHGGSQQGPPPPPPSQH-HP 502
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.8
Identities = 26/123 (21%), Positives = 31/123 (25%), Gaps = 3/123 (2%)
Frame = +2
Query: 431 PRTAPXXXPRTPXXPPXKNPXXPQRGEXXXTPRTXPXXNAKDPNXTADXXXXXXXXXXXX 610
P T P P P + Q E P A P +A
Sbjct: 401 PDTVPKQTPPPTPNAPSHSHQVDQFAEFKLVEPKTPTRVAPPPPPSAPPTIKFPISTGPS 460
Query: 611 XXRXXPXXRXQXXXPPPQXXXRXPTXQGPXGXT---PPQXRTPPXXTQNQDXPXPXQPPX 781
P + PPP P + PP PP T + P P PP
Sbjct: 461 YSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPP 520
Query: 782 TXP 790
P
Sbjct: 521 PPP 523
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.7 bits (61), Expect = 6.8
Identities = 38/194 (19%), Positives = 44/194 (22%), Gaps = 9/194 (4%)
Frame = +2
Query: 365 TXTPAPXXRAQAXTXXXEERRXPRTAPXXXPRT--PXXPPXKNPXXPQ-RGEXXXTPRTX 535
T TP P + EE R P T P PP P G P
Sbjct: 71 TGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPP 130
Query: 536 PXXNAKDPNXTADXXXXXXXXXXXXXXRXXPXXRXQXXXPPPQXXXRXPTXQGPXGXTPP 715
P P P PPP + + +G PP
Sbjct: 131 PKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPP 190
Query: 716 QXRT------PPXXTQNQDXPXPXQPPXTXPXPXTXXXKPTRXXXXRGXAATXPGXTXAX 877
PP + QD P P PT + G
Sbjct: 191 PPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTGEPQDLSGEGNASRR 250
Query: 878 XAXPPAXRXSPXXP 919
PP SP P
Sbjct: 251 PPPPPKGTGSPPPP 264
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 9.1
Identities = 23/92 (25%), Positives = 24/92 (26%), Gaps = 2/92 (2%)
Frame = +2
Query: 680 PTXQGPXGXTPPQXRTPPXXTQNQDXPXPXQPPXTXPXPXTXXXKPTRXXXXRGXAATXP 859
PT P P PP + P P QPP P P P G
Sbjct: 684 PTSSTPSDTPAPSTSVPPPTSVQP--PQPQQPPQGPPGPPGPQQHPGPYPGYPGYGPPGA 741
Query: 860 GXTXAXXAXPPAXRXS--PXXPXPKXXRXXQP 949
A A PP P P P P
Sbjct: 742 MRPPAGFAPPPGAPYGYPPGAPPPAGFHPSHP 773
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 9.1
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +2
Query: 653 PPPQXXXRXPTXQGPXGXTPPQXRTPPXXTQNQDXPXPXQPPXTXPXP 796
PPP P P PPQ PP P P PP P P
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCPPPPMC--PPPPPPPPPPMCPPPP 78
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.307 0.127 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,747,624
Number of Sequences: 27780
Number of extensions: 155137
Number of successful extensions: 549
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2615559500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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