Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_G01
(780 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 33 0.34
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.44
01_03_0005 + 11568545-11569119,11569179-11569191 32 0.44
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 0.78
02_04_0232 + 21130122-21130454,21130895-21131053,21131424-211315... 31 0.78
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 1.0
06_03_1055 - 27234824-27234838,27236087-27236125,27236322-272373... 31 1.4
01_06_0695 - 31292622-31293317 29 4.1
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 7.2
05_01_0494 - 4120996-4121011,4121152-4121483,4122560-4122706,412... 28 7.2
02_01_0083 - 566201-567127,567223-567464,567623-567880,568173-56... 28 7.2
08_02_1081 + 24215323-24215335,24215450-24215572,24216241-242164... 28 9.6
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 9.6
07_03_1136 + 24218601-24218734,24218769-24219906 28 9.6
03_05_0951 + 29093962-29094373,29095291-29095388,29095689-290960... 28 9.6
01_06_0723 + 31501900-31502808,31502846-31503295 28 9.6
>02_04_0179 +
20682852-20684510,20684593-20684661,20684741-20684809,
20686779-20688206
Length = 1074
Score = 32.7 bits (71), Expect = 0.34
Identities = 22/72 (30%), Positives = 25/72 (34%)
Frame = +3
Query: 537 AXPPXAPXXVGXNPNXPPDPXAXXXTXXRGEXGSXXXXPPPATWXGCXQXXGXGPPGXPP 716
A PP P G PP P A + + PPPAT + G G P PP
Sbjct: 21 AVPPPPPLLTGTA--VPPPPPAAAQPQPQQATVAEGDPPPPAT-GSAEEVAGNGEPPQPP 77
Query: 717 PXGXXSXXXXPP 752
S PP
Sbjct: 78 ATDPASEPTAPP 89
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.3 bits (70), Expect = 0.44
Identities = 27/108 (25%), Positives = 31/108 (28%), Gaps = 2/108 (1%)
Frame = +3
Query: 435 AAXPSSXLEHXXIPXGRXQGXGXKKNPGXXXGXRAXPPXAPXX--VGXNPNXPPDPXAXX 608
AA P+S +P GR + A PP P P PP A
Sbjct: 278 AARPASPSPSLPLPPGRESPSRPQSIAAAAVASPAPPPPPPPKPAAAAPPPPPPPKAAPP 337
Query: 609 XTXXRGEXGSXXXXPPPATWXGCXQXXGXGPPGXPPPXGXXSXXXXPP 752
+G PP G PP PPP G PP
Sbjct: 338 PPPPKGPPPPPPAKGPPPP----PPPKGPSPPPPPPPGGKKGGPPPPP 381
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 32.3 bits (70), Expect = 0.44
Identities = 20/63 (31%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Frame = +3
Query: 543 PPXAPXXVGXNPNXPPDPXAXXXTXXRGEXGS--XXXXPPPATWXGCXQXXGXGPPGXPP 716
PP P V P PP P G G+ PPP + G G G PP
Sbjct: 56 PPPPPPVVTPTPQCPPPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPP 115
Query: 717 PXG 725
P G
Sbjct: 116 PTG 118
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 31.5 bits (68), Expect = 0.78
Identities = 22/80 (27%), Positives = 24/80 (30%)
Frame = +3
Query: 513 PGXXXGXRAXPPXAPXXVGXNPNXPPDPXAXXXTXXRGEXGSXXXXPPPATWXGCXQXXG 692
PG G P P +P P P G GS PPP + G
Sbjct: 310 PGAGAGAGTGAPPPPPA---HPAAPAPPPPAPSPSAAGA-GSGPPPPPPPAAPAAPRPPG 365
Query: 693 XGPPGXPPPXGXXSXXXXPP 752
GP PPP PP
Sbjct: 366 PGPGPPPPPGAAGRGGGGPP 385
>02_04_0232 +
21130122-21130454,21130895-21131053,21131424-21131582,
21132420-21132512,21133321-21133437,21133623-21133697,
21133878-21134104,21134200-21135073
Length = 678
Score = 31.5 bits (68), Expect = 0.78
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +1
Query: 70 PSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKIFSID 198
PS TP ER S+D PR Y R+RD K+ S D
Sbjct: 365 PSDTPHLERSQSSDRRRPRSSDPRYTPSRTRDEDAHKQHSSRD 407
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.1 bits (67), Expect = 1.0
Identities = 25/94 (26%), Positives = 26/94 (27%), Gaps = 1/94 (1%)
Frame = +3
Query: 474 PXGRXQGXGXKKNPGXXXGXRAXPPXAPXX-VGXNPNXPPDPXAXXXTXXRGEXGSXXXX 650
P G G P G PP P +G P PP T G
Sbjct: 1126 PIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPP 1185
Query: 651 PPPATWXGCXQXXGXGPPGXPPPXGXXSXXXXPP 752
PPP G PPG P P PP
Sbjct: 1186 PPPPRGHG-GVGGPPTPPGAPAPPMPPGVPGGPP 1218
Score = 28.3 bits (60), Expect = 7.2
Identities = 22/77 (28%), Positives = 24/77 (31%), Gaps = 7/77 (9%)
Frame = +3
Query: 543 PPXAPXXVGXNPNXPPDPXAXXXTXXRGEXGSXXXXPPPATWX----GCXQXX---GXGP 701
P P VG P+ P P G G PPP G G G
Sbjct: 1049 PHYLPGEVGGAPSPPSPPPPQRENTSVGIQGGIPPLPPPLPPTLGDYGVAPPPPSIGAGA 1108
Query: 702 PGXPPPXGXXSXXXXPP 752
P PPP G + PP
Sbjct: 1109 PPPPPPPGGITGVPPPP 1125
>06_03_1055 -
27234824-27234838,27236087-27236125,27236322-27237388,
27237422-27237630,27237650-27238053
Length = 577
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = -2
Query: 338 ASXAESGKDMLTVEPRESGGSKQCDFTSRVSHSKRETRRRSPFGS 204
A+ A +GK + E E S+QCD T + +S RE ++R+P+ +
Sbjct: 430 AAAAAAGKPISEHEAIEHLWSRQCDLTEILQNSSRE-KKRNPYAA 473
>01_06_0695 - 31292622-31293317
Length = 231
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/47 (34%), Positives = 19/47 (40%)
Frame = +1
Query: 16 LSPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLR 156
+ P L Q D PS++ SST S P HR L P R
Sbjct: 1 MEPSTKQLLPMPQQDPNSPSSSTSSSSSSSTSPSHPHHRAPLPPSPR 47
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/74 (24%), Positives = 18/74 (24%)
Frame = +3
Query: 543 PPXAPXXVGXNPNXPPDPXAXXXTXXRGEXGSXXXXPPPATWXGCXQXXGXGPPGXPPPX 722
PP P PP P PPP C PP PP
Sbjct: 553 PPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPIL 612
Query: 723 GXXSXXXXPPXXXP 764
S PP P
Sbjct: 613 PNRSVPPPPPPPPP 626
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/64 (29%), Positives = 23/64 (35%), Gaps = 5/64 (7%)
Frame = +3
Query: 543 PPXAPXXVGXNPNXPPDPXAXXXTXXRGEXGSXXXX-----PPPATWXGCXQXXGXGPPG 707
PP AP +G PP P + R G+ PPP + G G P
Sbjct: 652 PPPAPG-IGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPS 710
Query: 708 XPPP 719
PPP
Sbjct: 711 APPP 714
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/74 (24%), Positives = 20/74 (27%)
Frame = +3
Query: 543 PPXAPXXVGXNPNXPPDPXAXXXTXXRGEXGSXXXXPPPATWXGCXQXXGXGPPGXPPPX 722
PP + +P PP P S PPP PP PPP
Sbjct: 552 PPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPI 611
Query: 723 GXXSXXXXPPXXXP 764
PP P
Sbjct: 612 LPNRSVPPPPPPPP 625
>05_01_0494 -
4120996-4121011,4121152-4121483,4122560-4122706,
4122818-4122871,4123203-4123367,4125516-4125827,
4125992-4126078,4126202-4126411
Length = 440
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 607 SXAXGSGGXFGLXPTXXGAXGGLAR 533
S A +GG FG+ P G GG AR
Sbjct: 170 SSAAAAGGRFGMKPRGVGVVGGAAR 194
>02_01_0083 -
566201-567127,567223-567464,567623-567880,568173-568298,
568420-568489
Length = 540
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -3
Query: 319 ARICSLWSPESREALNNVTSLVAFRIQNARRDVEA 215
AR C W PESR ++ V ++A ++R+ A
Sbjct: 449 ARECLQWEPESRPTMSEVVQILATIAPSSRKHAAA 483
>08_02_1081 +
24215323-24215335,24215450-24215572,24216241-24216489,
24218517-24218720,24218864-24218993,24219610-24219679,
24219766-24219900,24219996-24220209,24220314-24220455,
24220630-24220851,24220997-24221195
Length = 566
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 287 SGGSKQCDFTSRVSHSKRETRRRSPFGSRRSMLK 186
S G+ Q T R HS E RRRS R +L+
Sbjct: 212 SAGTDQMPNTPRSKHSATEQRRRSKINDRFQLLR 245
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +3
Query: 576 PNXPPDPXAXXXTXXRGEXGSXXXXPPPATWXGCXQXXGXGPPGXPPPXGXXSXXXXPPX 755
P PP P G PPP + PP PPP G S PP
Sbjct: 59 PPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQ--------PPPPPPPYGVNSSQPPPPP 110
Query: 756 XXP 764
P
Sbjct: 111 PPP 113
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 27.9 bits (59), Expect = 9.6
Identities = 24/76 (31%), Positives = 24/76 (31%), Gaps = 5/76 (6%)
Frame = -3
Query: 724 PXGGGXPGGPXPXXWXHPXQVAGGGXXXXXPXSP--RXLVXSXAXGSGGXFGLXPTXXGA 551
P GGG GP P GGG P A G GG G G
Sbjct: 91 PPGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGG 150
Query: 550 XGG---LARXPXXXPG 512
GG LAR P G
Sbjct: 151 GGGGGALARPPGGGRG 166
>03_05_0951 +
29093962-29094373,29095291-29095388,29095689-29096087,
29096999-29097724,29097802-29097968,29098046-29098311,
29098396-29098581,29099072-29099346,29099435-29099683
Length = 925
Score = 27.9 bits (59), Expect = 9.6
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = -2
Query: 347 KAEASXAESGKDMLTVEP-RESGGSKQCDFTSRVSHSKRETR-RRSPFGSRRSMLKIFFL 174
K+ AS A G D P R GG K+ S + SKR + R + F +L L
Sbjct: 4 KSSASAAHQGGDAPAEAPRRRGGGGKRKSGGSSFTPSKRHAKERNAAFHVPPHLLHSGPL 63
Query: 173 TRASR 159
TRA+R
Sbjct: 64 TRAAR 68
>01_06_0723 + 31501900-31502808,31502846-31503295
Length = 452
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 16 LSPGAGLSLNRSQHDAALPSTTPRQERKS-STDYSEP 123
L PG L + DAA +TT +++R++ DYS P
Sbjct: 91 LLPGRALGFFHKEQDAAAVATTRKRKRRAIIVDYSTP 127
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.136 0.436
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,168,584
Number of Sequences: 37544
Number of extensions: 369519
Number of successful extensions: 1061
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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