Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_F24
(999 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.007
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.036
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.19
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.25
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.59
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.59
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.78
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 1.4
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 28 1.8
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 28 2.4
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 3.1
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 4.1
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.3 bits (80), Expect = 0.007
Identities = 23/73 (31%), Positives = 24/73 (32%)
Frame = +2
Query: 680 PPXPXXXPLXXGXXPXPPPXXPPXXPPPXSXPXAGPXXXXXXAXPPPPXXXFXPXXXXPS 859
PP P L P PP PP P P A P PP P P+
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSL--PMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPA 472
Query: 860 XPXXPPPXXXPXP 898
P PPP P P
Sbjct: 473 AP-APPPAPAPAP 484
Score = 34.3 bits (75), Expect = 0.027
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = +3
Query: 723 PXPXXXXPXXPPPPXXXXPPGPPXGXXXXAPPPP--XXSSXXXXXXHXXPPXPPRXPXPX 896
P P P PP PP P G P PP + PP PP P P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Query: 897 P 899
P
Sbjct: 478 P 478
Score = 31.1 bits (67), Expect = 0.25
Identities = 23/70 (32%), Positives = 23/70 (32%), Gaps = 4/70 (5%)
Frame = +2
Query: 680 PPXPXXXPLXXGXXPXPPPXXP-PXXPPPXSXPXAG---PXXXXXXAXPPPPXXXFXPXX 847
PP P G P PP P PPP S P G P A PP P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAP--PPAI 395
Query: 848 XXPSXPXXPP 877
S P PP
Sbjct: 396 PGRSAPALPP 405
Score = 29.9 bits (64), Expect = 0.59
Identities = 39/182 (21%), Positives = 42/182 (23%), Gaps = 10/182 (5%)
Frame = +2
Query: 410 KKXPPPXXXGXXXXXXXXKKXXVXXXXGGGXPPPXPPXXPXXXKKKKXXXWGGGGXPPPX 589
KK PPP K PPP PP G PPP
Sbjct: 308 KKRPPPPPP--PSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Query: 590 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP--PXPXXXPLXXGXXPXPPPXXPPXXPPP 763
P P PL PP P PP
Sbjct: 366 PRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP 425
Query: 764 XSXPXAGP-----XXXXXXAXPP-PPXXXFXP--XXXXPSXPXXPPPXXXPXPXXSXXXX 919
+ P P A PP PP P P+ P PP P P +
Sbjct: 426 SAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPA 485
Query: 920 XP 925
P
Sbjct: 486 AP 487
Score = 29.9 bits (64), Expect = 0.59
Identities = 21/81 (25%), Positives = 21/81 (25%), Gaps = 3/81 (3%)
Frame = +3
Query: 744 PXXPPPPXXXXPPGPPXGXXXX---APPPPXXSSXXXXXXHXXPPXPPRXPXPXPXXXXX 914
P PPPP PP G PPPP PP P P P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 915 XXXXXXPXXPXSYXXXRXPXP 977
P S P P
Sbjct: 371 STGRQPPPLSSSRAVSNPPAP 391
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.9 bits (74), Expect = 0.036
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = +3
Query: 723 PXPXXXXPXXPPPPXXXXPPGPPXGXXXXAPPPPXXSSXXXXXXHXXPPXPPRXP 887
P P P P P PP P G PPPP + PP PP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGA------GPPPPPPPPP 783
Score = 32.7 bits (71), Expect = 0.083
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +2
Query: 728 PPPXXPPXXPPPXSXPXAGPXXXXXXAXPPPPXXXFXPXXXXPSXPXXPPP 880
PPP P P P P PPPP P P PPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.9 bits (69), Expect = 0.15
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = +2
Query: 680 PPXPXXXPLXXGXXPXPPPXXPPXXPPPXSXPXAGPXXXXXXAXPPPPXXXFXPXXXXPS 859
PP P + P P P PP P P P A PPPP S
Sbjct: 732 PPPPPPAVIVPTPAPAPIP-VPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGS 790
Query: 860 XPXXPPPXXXPXP 898
P P P P
Sbjct: 791 RYYAPAPQAEPEP 803
Score = 26.6 bits (56), Expect = 5.5
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 2/47 (4%)
Frame = +1
Query: 811 PPPPRXXLPXXXXXXIXPXPXPP--GXXPXPPXXXXXAXXXXXPXXP 945
PPPP +P I P P G P PP A P P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.19
Identities = 20/72 (27%), Positives = 20/72 (27%), Gaps = 1/72 (1%)
Frame = +1
Query: 688 PXXXPPXXRXXPPXPXXXPPXXPPPXVXPXRRAXXXGXXXXPPPPRXXLPXXXXXXIXPX 867
P P P P PP P P A G P P P P
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPV 1200
Query: 868 PXPP-GXXPXPP 900
P P G P PP
Sbjct: 1201 PKPSVGVPPVPP 1212
Score = 30.3 bits (65), Expect = 0.44
Identities = 17/66 (25%), Positives = 17/66 (25%)
Frame = +3
Query: 702 PSXXXXXPXPXXXXPXXPPPPXXXXPPGPPXGXXXXAPPPPXXSSXXXXXXHXXPPXPPR 881
PS P P P P P P P PPP P PP
Sbjct: 1155 PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPS 1214
Query: 882 XPXPXP 899
P P
Sbjct: 1215 TAPPVP 1220
Score = 30.3 bits (65), Expect = 0.44
Identities = 20/83 (24%), Positives = 21/83 (25%)
Frame = +1
Query: 688 PXXXPPXXRXXPPXPXXXPPXXPPPXVXPXRRAXXXGXXXXPPPPRXXLPXXXXXXIXPX 867
P P P P P PPP P G PPP + P
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPV 1229
Query: 868 PXPPGXXPXPPXXXXXAXXXXXP 936
P P P P A P
Sbjct: 1230 PVPTAKAPPVPAPSSEAPSVSTP 1252
Score = 29.9 bits (64), Expect = 0.59
Identities = 20/66 (30%), Positives = 20/66 (30%)
Frame = +2
Query: 701 PLXXGXXPXPPPXXPPXXPPPXSXPXAGPXXXXXXAXPPPPXXXFXPXXXXPSXPXXPPP 880
P G P P P P P P A P A PP P P PS P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVA--APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVP 1134
Query: 881 XXXPXP 898
P
Sbjct: 1135 VPSGAP 1140
Score = 29.5 bits (63), Expect = 0.78
Identities = 20/76 (26%), Positives = 20/76 (26%)
Frame = +2
Query: 680 PPXPXXXPLXXGXXPXPPPXXPPXXPPPXSXPXAGPXXXXXXAXPPPPXXXFXPXXXXPS 859
PP P P P P PP P P PPP P
Sbjct: 1150 PPVPA--PSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGV 1207
Query: 860 XPXXPPPXXXPXPXXS 907
P PP P P S
Sbjct: 1208 PPVPPPSTAPPVPTPS 1223
Score = 28.7 bits (61), Expect = 1.4
Identities = 22/77 (28%), Positives = 23/77 (29%), Gaps = 4/77 (5%)
Frame = +2
Query: 680 PPXPXXX---PLXXGXXPXPPPXXPPXXPPPXSXP-XAGPXXXXXXAXPPPPXXXFXPXX 847
PP P P+ PP P PP P A P A PP P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 848 XXPSXPXXPPPXXXPXP 898
PS P P P
Sbjct: 1143 PKPSVAAPPVPAPSGAP 1159
Score = 28.3 bits (60), Expect = 1.8
Identities = 22/88 (25%), Positives = 23/88 (26%), Gaps = 3/88 (3%)
Frame = +2
Query: 683 PXPXXXPLXXGXXPXPPPXXPPXXPPPXSXPXAG--PXXXXXXAXPPPPXXXFXPXXXXP 856
P P P PP P PP P P A P P P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 857 S-XPXXPPPXXXPXPXXSXXXXXPXXXP 937
S P P P P + P P
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 27.9 bits (59), Expect = 2.4
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +2
Query: 683 PXPXXXPLXXGXXPXPPPXXPPXXPPPXSXPXAG-PXXXXXXAXPPP 820
P P P PP PP PP P AG P A PP
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 27.5 bits (58), Expect = 3.1
Identities = 20/68 (29%), Positives = 21/68 (30%)
Frame = +2
Query: 722 PXPPPXXPPXXPPPXSXPXAGPXXXXXXAXPPPPXXXFXPXXXXPSXPXXPPPXXXPXPX 901
P P P P P P S P + PPP P PS P P P P
Sbjct: 1033 PIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVP---APSSEIPSIP--APSGAPPVPA 1087
Query: 902 XSXXXXXP 925
S P
Sbjct: 1088 PSGIPPVP 1095
Score = 27.1 bits (57), Expect = 4.1
Identities = 18/71 (25%), Positives = 20/71 (28%), Gaps = 2/71 (2%)
Frame = +2
Query: 701 PLXXGXXPXPPPXX--PPXXPPPXSXPXAGPXXXXXXAXPPPPXXXFXPXXXXPSXPXXP 874
P+ G P P P PP P + P P P P P P
Sbjct: 1134 PVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Query: 875 PPXXXPXPXXS 907
P P P S
Sbjct: 1194 PSEAPPVPKPS 1204
Score = 26.6 bits (56), Expect = 5.5
Identities = 20/74 (27%), Positives = 23/74 (31%), Gaps = 4/74 (5%)
Frame = +1
Query: 688 PXXXPPXXRXXPPXPXXXPPXXPPPXVXPXRRAXXXGXXXXPPP---PRXXLP-XXXXXX 855
P P P P PP P P ++ G PPP P +P
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKS-SSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Query: 856 IXPXPXPPGXXPXP 897
P P P G P P
Sbjct: 1082 APPVPAPSGIPPVP 1095
Score = 26.6 bits (56), Expect = 5.5
Identities = 22/90 (24%), Positives = 25/90 (27%), Gaps = 4/90 (4%)
Frame = +2
Query: 680 PPXPXXXPLXXGXXPXPPPXX-PPXXPPPXSXPXAG-PXXXXXXAXPPPPXXXFXPXXXX 853
P P+ P P P PPP P + P PP P P
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPK 1096
Query: 854 PS--XPXXPPPXXXPXPXXSXXXXXPXXXP 937
PS P P P P + P P
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 26.2 bits (55), Expect = 7.2
Identities = 23/89 (25%), Positives = 23/89 (25%), Gaps = 4/89 (4%)
Frame = +2
Query: 683 PXPXXXPLXXGXXPXPPPXXPPXXPPPXSXP--XAGPXXXXXXAXPPPPXXXFXPXXXXP 856
P P P PP P PP P A P A P P P P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Query: 857 S--XPXXPPPXXXPXPXXSXXXXXPXXXP 937
S P P P P P P
Sbjct: 1175 SSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 25.8 bits (54), Expect = 9.5
Identities = 21/89 (23%), Positives = 21/89 (23%)
Frame = +3
Query: 729 PXXXXPXXPPPPXXXXPPGPPXGXXXXAPPPPXXSSXXXXXXHXXPPXPPRXPXPXPXXX 908
P P PP PP PP P SS P PP P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGA-------PSAPPPVPAPSSEIP 1074
Query: 909 XXXXXXXXPXXPXSYXXXRXPXPXXXXXP 995
P P P P P
Sbjct: 1075 SIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 31.1 bits (67), Expect = 0.25
Identities = 19/67 (28%), Positives = 20/67 (29%)
Frame = +1
Query: 700 PPXXRXXPPXPXXXPPXXPPPXVXPXRRAXXXGXXXXPPPPRXXLPXXXXXXIXPXPXPP 879
PP P PP PPP + P P P R I P P P
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQST----NTSQLPMPSRNVNNLGSQVNIPPPPATP 279
Query: 880 GXXPXPP 900
P PP
Sbjct: 280 SQPPRPP 286
Score = 26.6 bits (56), Expect = 5.5
Identities = 17/63 (26%), Positives = 18/63 (28%)
Frame = +2
Query: 689 PXXXPLXXGXXPXPPPXXPPXXPPPXSXPXAGPXXXXXXAXPPPPXXXFXPXXXXPSXPX 868
P P P PPP PP PP + P P PS P
Sbjct: 225 PTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLP-MPSRNVNNLGSQVNIPPPPATPSQPP 283
Query: 869 XPP 877
PP
Sbjct: 284 RPP 286
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.9 bits (64), Expect = 0.59
Identities = 23/72 (31%), Positives = 24/72 (33%)
Frame = -1
Query: 897 GXGXXXGGGXXGXDGXXXXGXKXXXGGGGXAXXXXXXGPAXGXDXGGGXXGGXXGGGXGX 718
G G G G G +G G GGG G G GG GG GGG G
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGH-GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGF-GGGPGG 260
Query: 717 XPXXRGXXXGXG 682
G G G
Sbjct: 261 FGGGPGGHGGPG 272
Score = 25.8 bits (54), Expect = 9.5
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 759 GGXXGGXXGGGXGXXPXXRGXXXGXGG 679
GG GG GGG G P G G GG
Sbjct: 187 GGGFGG-FGGGSGGPPPGPGGFGGFGG 212
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.9 bits (64), Expect = 0.59
Identities = 24/100 (24%), Positives = 25/100 (25%), Gaps = 1/100 (1%)
Frame = +2
Query: 680 PPXPXXXPLXXGXXPXPPPXXPPXXPPPXSXPXAGPXXXXXXAXPPPPXXXFXPXXXXPS 859
PP P P P P P PP + PPPP P S
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQ-APVANTSS 216
Query: 860 XP-XXPPPXXXPXPXXSXXXXXPXXXPXXXXXXXXPXPXS 976
P PP S P P P P S
Sbjct: 217 RPSSFAPPAGHAPNVTSESPKFPNRGPSIPSASVPPVPPS 256
Score = 29.1 bits (62), Expect = 1.0
Identities = 23/81 (28%), Positives = 23/81 (28%), Gaps = 8/81 (9%)
Frame = +2
Query: 680 PPXPXXX---PLXXGXXPXPPPXXPPXXPPPXSXPXAGPXXXXXXAXP-----PPPXXXF 835
PP P P P PP P PP S P A P PP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPS 189
Query: 836 XPXXXXPSXPXXPPPXXXPXP 898
P P P PPP P
Sbjct: 190 LPSAVPPMPPKVPPPPLSQAP 210
Score = 29.1 bits (62), Expect = 1.0
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +1
Query: 682 PXPXXXPPXXRXXPPXPXXXPPXXPPPXVXPXRRAXXXGXXXXPPPPRXXLP 837
P P PP PP P PP A PPPP P
Sbjct: 159 PIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 25.8 bits (54), Expect = 9.5
Identities = 17/72 (23%), Positives = 17/72 (23%)
Frame = +3
Query: 729 PXXXXPXXPPPPXXXXPPGPPXGXXXXAPPPPXXSSXXXXXXHXXPPXPPRXPXPXPXXX 908
P P P PP P A PP S PP P P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 909 XXXXXXXXPXXP 944
P P
Sbjct: 188 PSLPSAVPPMPP 199
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 0.78
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +2
Query: 704 LXXGXXPXPPPXXPPXXPPPXSXPXAGPXXXXXXAXPPPPXXXFXPXXXXPSXPXXPPPX 883
L G P P PP P + P PPPP P P P PP
Sbjct: 1677 LFGGMAPAHPVSTPPVRPQSAAPPQMS------APTPPPPPMSVPPPPSAPPMPAGPPSA 1730
Query: 884 XXP 892
P
Sbjct: 1731 PPP 1733
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = +2
Query: 680 PPXPXXXPLXXGXXPXPPPXXPPXXPPPXSXPXAGPXXXXXXAXPPPPXXXFXPXXXXPS 859
P P P PP P PPP P A PP P PS
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPS 1742
Query: 860 XP 865
P
Sbjct: 1743 VP 1744
Score = 27.5 bits (58), Expect = 3.1
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +2
Query: 680 PPXPXXXPLXXGXXPXPPPXXPPXXPPPXSXP 775
PP P P+ G PPP P P P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 26.6 bits (56), Expect = 5.5
Identities = 20/72 (27%), Positives = 21/72 (29%)
Frame = +1
Query: 721 PPXPXXXPPXXPPPXVXPXRRAXXXGXXXXPPPPRXXLPXXXXXXIXPXPXPPGXXPXPP 900
P P PP P P A PPPP +P P P P P PP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPT------PPPPPMSVP--PPPSAPPMPAGPPSAPPPP 1734
Query: 901 XXXXXAXXXXXP 936
A P
Sbjct: 1735 LPASSAPSVPNP 1746
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.7 bits (61), Expect = 1.4
Identities = 20/62 (32%), Positives = 20/62 (32%)
Frame = -3
Query: 886 GXRGGXGGXXWXXXXXXEXXXGGGGAXXXXPXGGPGGXXXXGGGGXXGXXXXGXGXXXXX 707
G RGG GG G GG GG GG GG G G G G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGG--ARGGRGGRGGARGGRGGSSGG 63
Query: 706 EG 701
G
Sbjct: 64 RG 65
Score = 27.1 bits (57), Expect = 4.1
Identities = 19/59 (32%), Positives = 20/59 (33%)
Frame = -1
Query: 876 GGXXGXDGXXXXGXKXXXGGGGXAXXXXXXGPAXGXDXGGGXXGGXXGGGXGXXPXXRG 700
GG G G G GG G A G A G G G G GG G +G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGG-ARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 27.1 bits (57), Expect = 4.1
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = -3
Query: 898 GXGXGXRGGXGGXXWXXXXXXEXXXGGGGAXXXXPXGGPGGXXXXGGGGXXG 743
G G RGG G GGG GG GG GG G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 25.8 bits (54), Expect = 9.5
Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 1/48 (2%)
Frame = -1
Query: 819 GGGXAXXXXXXGPAXGXDXG-GGXXGGXXGGGXGXXPXXRGXXXGXGG 679
GG G G G GG GG GG G G G GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 28.3 bits (60), Expect = 1.8
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +3
Query: 753 PPPPXXXXPPGPPXGXXXXAPPPPXXSSXXXXXXHXXPPXPPRXPXPXP 899
P PP PPG P AP P + PP P P P
Sbjct: 492 PLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFP 540
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 27.9 bits (59), Expect = 2.4
Identities = 15/49 (30%), Positives = 17/49 (34%)
Frame = +2
Query: 728 PPPXXPPXXPPPXSXPXAGPXXXXXXAXPPPPXXXFXPXXXXPSXPXXP 874
PPP P PP + A P A PP + P P P P
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAY-PPQQAPYPPVQAYPQAPQQP 253
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.5 bits (58), Expect = 3.1
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 759 PPXXXXPPGPPXGXXXXAPPPP 824
PP PP PP G + PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPP 26
Score = 26.6 bits (56), Expect = 5.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 729 PXXXXPXXPPPPXXXXPPGPPXGXXXXAPPPP 824
P P PPPP P PP PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPP------PPPPP 30
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 812 PPPPXXXFXPXXXXPSXPXXPPP 880
PPPP F P PS P PPP
Sbjct: 11 PPPPPPGFEP----PSQPPPPPP 29
Score = 25.8 bits (54), Expect = 9.5
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 688 PXXXPPXXRXXPPXPXXXPPXXPPPXVXP 774
P PP PP P PP PPP P
Sbjct: 5 PPGNPPPP---PPPPGFEPPSQPPPPPPP 30
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.1 bits (57), Expect = 4.1
Identities = 17/67 (25%), Positives = 20/67 (29%), Gaps = 2/67 (2%)
Frame = +2
Query: 683 PXPXXXPLXXGXXPXPPPXXPPXXP--PPXSXPXAGPXXXXXXAXPPPPXXXFXPXXXXP 856
P P P+ P P P P P A P + P PP P
Sbjct: 635 PQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQPPAVPVVPEAGQL 694
Query: 857 SXPXXPP 877
+ P PP
Sbjct: 695 NEPVVPP 701
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,262,252
Number of Sequences: 5004
Number of extensions: 39881
Number of successful extensions: 362
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 517271174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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