Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_F22
         (1177 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       30   3.1  
07_03_1203 - 24848342-24848885,24849199-24849204,24849648-248499...    29   7.1  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 17/45 (37%), Positives = 17/45 (37%)
 Frame = +3

Query: 423 KGKXTPPPXXXXGGPXXXFWGKKKKXPXPXLGGGGGXXPPXRGGV 557
           KG   PPP      P     G KK  P P    GG   PP   GV
Sbjct: 351 KGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPGV 395


>07_03_1203 -
           24848342-24848885,24849199-24849204,24849648-24849947,
           24852725-24853047,24853076-24853255
          Length = 450

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
 Frame = +3

Query: 477 FWGKKKKXP-XPXLGGGGGXXP--PXRGGV 557
           FWG++ + P  P   GGGG  P  P  GGV
Sbjct: 205 FWGRRPQHPLAPDASGGGGYAPAAPRDGGV 234


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,584,755
Number of Sequences: 37544
Number of extensions: 162944
Number of successful extensions: 316
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 306
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3596576368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)