Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_F18
         (766 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   188   5e-48
Z96100-7|CAB09531.1|  824|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z79698-2|CAB01976.1|  824|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z79698-1|CAL44963.1|  758|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z70279-6|CAA94244.2|  720|Caenorhabditis elegans Hypothetical pr...    28   6.3  
AL023841-4|CAC42359.1|  720|Caenorhabditis elegans Hypothetical ...    28   6.3  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  188 bits (457), Expect = 5e-48
 Identities = 100/198 (50%), Positives = 125/198 (63%)
 Frame = -1

Query: 718 VVIPAHNTGLRFQRRPXFFQALXIPTQDFKRGTIEIINDVHILKPGDKVGASEATLLNML 539
           V +P  NTG+    +  FFQAL IPT+   RGTIEI+NDVH++K GDKVGASE+ LLNML
Sbjct: 121 VKLPPQNTGMG-PEKTSFFQALQIPTK-IARGTIEILNDVHLIKEGDKVGASESALLNML 178

Query: 538 NISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAP 359
            ++PFSYGLVV+QVYD GT++ PE+LD+  E+LR +F +GV NVA++SLA+ YPT+AS  
Sbjct: 179 GVTPFSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVA 238

Query: 358 HSIANGFKNLLXXXXXXXXXXXXXXTIKEFIKDPSKFXXXXXXXXXXXXXXXXXXXXXXX 179
           HS+ANG +N+L              TIK FI DPSKF                       
Sbjct: 239 HSLANGLQNMLGVAAVTDVSFKEAETIKAFIADPSKF----AAAAPAAAAAPAAAAPAAK 294

Query: 178 XXXXXXXSDDDMGFGLFD 125
                  SDDDMGFGLFD
Sbjct: 295 KEEPKEESDDDMGFGLFD 312


>Z96100-7|CAB09531.1|  824|Caenorhabditis elegans Hypothetical
           protein H15N14.2a protein.
          Length = 824

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 27/102 (26%), Positives = 43/102 (42%)
 Frame = -1

Query: 694 GLRFQRRPXFFQALXIPTQDFKRGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYG 515
           G + Q  P   + L I + DF      + ND+   KP    G S+ +L   L+     +G
Sbjct: 537 GGKAQADPDAIEKLAINSGDFDYA---LENDI---KPA--FGRSDESLNRFLSRGMIVWG 588

Query: 514 LVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLA 389
             V ++ D G++ A  + + +    R    AG A     SLA
Sbjct: 589 PEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTSLA 630


>Z79698-2|CAB01976.1|  824|Caenorhabditis elegans Hypothetical
           protein H15N14.2a protein.
          Length = 824

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 27/102 (26%), Positives = 43/102 (42%)
 Frame = -1

Query: 694 GLRFQRRPXFFQALXIPTQDFKRGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYG 515
           G + Q  P   + L I + DF      + ND+   KP    G S+ +L   L+     +G
Sbjct: 537 GGKAQADPDAIEKLAINSGDFDYA---LENDI---KPA--FGRSDESLNRFLSRGMIVWG 588

Query: 514 LVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLA 389
             V ++ D G++ A  + + +    R    AG A     SLA
Sbjct: 589 PEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTSLA 630


>Z79698-1|CAL44963.1|  758|Caenorhabditis elegans Hypothetical
           protein H15N14.2b protein.
          Length = 758

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 27/102 (26%), Positives = 43/102 (42%)
 Frame = -1

Query: 694 GLRFQRRPXFFQALXIPTQDFKRGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYG 515
           G + Q  P   + L I + DF      + ND+   KP    G S+ +L   L+     +G
Sbjct: 471 GGKAQADPDAIEKLAINSGDFDYA---LENDI---KPA--FGRSDESLNRFLSRGMIVWG 522

Query: 514 LVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLA 389
             V ++ D G++ A  + + +    R    AG A     SLA
Sbjct: 523 PEVTKILDEGSLLAATVKNPENSGFRTVVLAGAAKTGKTSLA 564


>Z70279-6|CAA94244.2|  720|Caenorhabditis elegans Hypothetical
           protein K11E8.1c protein.
          Length = 720

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -2

Query: 732 CPHCQLSFPPTTPAFGSREDLFFSRLFXSLPKISKG-VLLKSST 604
           C H   + P  +P   S++ LFF+ LF   P  S+  +LL+ +T
Sbjct: 366 CVHPFTTHPYYSPKESSKKKLFFTLLFEVCPHTSRSHILLRDNT 409


>AL023841-4|CAC42359.1|  720|Caenorhabditis elegans Hypothetical
           protein K11E8.1c protein.
          Length = 720

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = -2

Query: 732 CPHCQLSFPPTTPAFGSREDLFFSRLFXSLPKISKG-VLLKSST 604
           C H   + P  +P   S++ LFF+ LF   P  S+  +LL+ +T
Sbjct: 366 CVHPFTTHPYYSPKESSKKKLFFTLLFEVCPHTSRSHILLRDNT 409


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,735,033
Number of Sequences: 27780
Number of extensions: 287723
Number of successful extensions: 755
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)