Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_F15
         (739 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p pro...   138   6e-33
AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA...   138   6e-33
X13382-1|CAA31759.1|  407|Drosophila melanogaster protein ( Dros...   138   1e-32
AY070560-1|AAL48031.1|  712|Drosophila melanogaster LD33051p pro...    38   0.019
AF173549-1|AAL29184.1|  712|Drosophila melanogaster mystery 45A ...    38   0.019
AE013599-787|AAF58986.2|  712|Drosophila melanogaster CG8070-PA ...    38   0.019
AY089218-1|AAL89956.1|  305|Drosophila melanogaster AT01821p pro...    31   2.2  
AF045470-1|AAF18568.1|  305|Drosophila melanogaster Gom protein.       31   2.2  
AE013599-3345|AAF46808.2|  305|Drosophila melanogaster CG6727-PA...    31   2.2  
M35889-1|AAA28448.1| 1589|Drosophila melanogaster defective chor...    29   5.0  
AE014298-1066|AAF46278.2| 1590|Drosophila melanogaster CG2175-PA...    29   5.0  
BT021245-1|AAX33393.1| 1823|Drosophila melanogaster RE64082p pro...    29   8.7  
AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic ...    29   8.7  
AE014296-703|AAF47799.2| 1818|Drosophila melanogaster CG10847-PB...    29   8.7  
AE014296-702|AAS64963.1| 1823|Drosophila melanogaster CG10847-PA...    29   8.7  

>AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p
           protein.
          Length = 401

 Score =  138 bits (335), Expect = 6e-33
 Identities = 70/123 (56%), Positives = 86/123 (69%)
 Frame = -1

Query: 544 AGLTPYSGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 365
           A L    G+WK PS  KK +NLPQPKMANTDL+RLLKS+EIRKVLR P KRV R+ R+LN
Sbjct: 261 ARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLN 320

Query: 364 PLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRER 185
           PLTN + ++KLNPYA VLKR+A L   +R   K LA A+K  ++L+K + A  A K    
Sbjct: 321 PLTNVRQLIKLNPYAEVLKRRAALAAEKRTVAKVLAKAKKQNVELAKSHFANVATKAAAN 380

Query: 184 RRK 176
           R K
Sbjct: 381 RAK 383



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = -3

Query: 644 PGVGFLNVNKLTFLKLVPGGHLGRFVIWTQSAFGRLDPLFG 522
           PG+  +NV+KL  LKL PGGH+GRFVIWT+SAF RL+ LFG
Sbjct: 228 PGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFG 268


>AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA
           protein.
          Length = 401

 Score =  138 bits (335), Expect = 6e-33
 Identities = 70/123 (56%), Positives = 86/123 (69%)
 Frame = -1

Query: 544 AGLTPYSGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 365
           A L    G+WK PS  KK +NLPQPKMANTDL+RLLKS+EIRKVLR P KRV R+ R+LN
Sbjct: 261 ARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLN 320

Query: 364 PLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRER 185
           PLTN + ++KLNPYA VLKR+A L   +R   K LA A+K  ++L+K + A  A K    
Sbjct: 321 PLTNVRQLIKLNPYAEVLKRRAALAAEKRTVAKVLAKAKKQNVELAKSHFANVATKAAAN 380

Query: 184 RRK 176
           R K
Sbjct: 381 RAK 383



 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = -3

Query: 644 PGVGFLNVNKLTFLKLVPGGHLGRFVIWTQSAFGRLDPLFG 522
           PG+  +NV+KL  LKL PGGH+GRFVIWT+SAF RL+ LFG
Sbjct: 228 PGIETINVDKLNLLKLAPGGHVGRFVIWTESAFARLNDLFG 268


>X13382-1|CAA31759.1|  407|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for put. ribosomal protein
           L1. ).
          Length = 407

 Score =  138 bits (333), Expect = 1e-32
 Identities = 69/118 (58%), Positives = 85/118 (72%)
 Frame = -1

Query: 544 AGLTPYSGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLN 365
           A L    G+WK PS  KK +NLPQPKMANTDL+RLLKS+EIRKVLR P KRV R+ R+LN
Sbjct: 261 ARLNDLFGTWKKPSTLKKGYNLPQPKMANTDLSRLLKSEEIRKVLRDPRKRVFRSVRRLN 320

Query: 364 PLTNNKAMLKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLR 191
           PLTN + ++KLNPYA VLKR+A L   +R   K LA A+K  ++L+K + A  A K R
Sbjct: 321 PLTNVRQLIKLNPYAEVLKRRAALAAEKRTVAKVLAKAKKQNVELAKSHFANVATKAR 378



 Score = 66.9 bits (156), Expect = 3e-11
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = -3

Query: 644 PGVGFLNVNKLTFLKLVPGGHLGRFVIWTQSAFGRLDPLFG 522
           PG+  +NV+KL  LKL PGGH+GRFVIWT+SAF RL+ LFG
Sbjct: 228 PGIETINVDKLNVLKLAPGGHVGRFVIWTESAFARLNDLFG 268


>AY070560-1|AAL48031.1|  712|Drosophila melanogaster LD33051p
           protein.
          Length = 712

 Score = 37.5 bits (83), Expect = 0.019
 Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
 Frame = -1

Query: 502 KQKKNFNLPQPKMANTDL--TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA-MLKL 332
           K+KK+  +   K A  +L  TR+   ++ +++  A  K+ + + RK  PL  ++A  +KL
Sbjct: 566 KEKKDMRILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKL 624

Query: 331 NPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAMKAEKLRERRRKN 173
           N    + K++   +  R + ++A   D E+ G K  + N         +R+ KN
Sbjct: 625 NSIEMIYKKRKHDKESRLETVQAGRQDRERFGWKDGRVNEHCSKTNREKRKTKN 678


>AF173549-1|AAL29184.1|  712|Drosophila melanogaster mystery 45A
           protein.
          Length = 712

 Score = 37.5 bits (83), Expect = 0.019
 Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
 Frame = -1

Query: 502 KQKKNFNLPQPKMANTDL--TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA-MLKL 332
           K+KK+  +   K A  +L  TR+   ++ +++  A  K+ + + RK  PL  ++A  +KL
Sbjct: 566 KEKKDMRILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKL 624

Query: 331 NPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAMKAEKLRERRRKN 173
           N    + K++   +  R + ++A   D E+ G K  + N         +R+ KN
Sbjct: 625 NSIEMIYKKRKHDKESRLETVQAGRQDRERFGWKDGRVNEHCSKTNREKRKTKN 678


>AE013599-787|AAF58986.2|  712|Drosophila melanogaster CG8070-PA
           protein.
          Length = 712

 Score = 37.5 bits (83), Expect = 0.019
 Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
 Frame = -1

Query: 502 KQKKNFNLPQPKMANTDL--TRLLKSDEIRKVLRAPNKRVIRATRKLNPLTNNKA-MLKL 332
           K+KK+  +   K A  +L  TR+   ++ +++  A  K+ + + RK  PL  ++A  +KL
Sbjct: 566 KEKKDMRILNQKEAAQELALTRIFTDEDFKRINAANLKKTVTSARK-RPLEQDRAEFVKL 624

Query: 331 NPYAAVLKRKAILELRRRKNLKA-LADAEKSGLKLSKRNPAMKAEKLRERRRKN 173
           N    + K++   +  R + ++A   D E+ G K  + N         +R+ KN
Sbjct: 625 NSIEMIYKKRKHDKESRLETVQAGRQDRERFGWKDGRVNEHCSKTNREKRKTKN 678


>AY089218-1|AAL89956.1|  305|Drosophila melanogaster AT01821p
           protein.
          Length = 305

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -1

Query: 337 KLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERRRK 176
           +L+    +   +   EL  +  LK L + EK   K+ K    +KAE+ +ER +K
Sbjct: 204 ELDELQRLAAEREAFELWEKDELKRLEEQEKEREKIRKEKAKVKAERDKEREKK 257


>AF045470-1|AAF18568.1|  305|Drosophila melanogaster Gom protein.
          Length = 305

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -1

Query: 337 KLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERRRK 176
           +L+    +   +   EL  +  LK L + EK   K+ K    +KAE+ +ER +K
Sbjct: 204 ELDELQRLAAEREAFELWEKDELKRLEEQEKEREKIRKEKAKVKAERDKEREKK 257


>AE013599-3345|AAF46808.2|  305|Drosophila melanogaster CG6727-PA
           protein.
          Length = 305

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -1

Query: 337 KLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNPAMKAEKLRERRRK 176
           +L+    +   +   EL  +  LK L + EK   K+ K    +KAE+ +ER +K
Sbjct: 204 ELDELQRLAAEREAFELWEKDELKRLEEQEKEREKIRKEKAKVKAERDKEREKK 257


>M35889-1|AAA28448.1| 1589|Drosophila melanogaster defective chorion-1
            fc177 proteinprecursor protein.
          Length = 1589

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
 Frame = -1

Query: 535  TPYSGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLT 356
            +PY+   K   ++     +P PK+        ++S    K+ + P K + +  ++ + +T
Sbjct: 1450 SPYAMRGKFVRRRSTARRVPIPKIGKASDEVWVRSPRQAKMPQRPKKSMSKPKKQSSQVT 1509

Query: 355  NNKAM--LKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNP-AMKAEKLRER 185
                +   KL+    VLK    L++++ K    L     +   LSK  P ++K  K+ +R
Sbjct: 1510 TQATVSSTKLDSLVDVLKDLVRLQIQKEKKSSLLRTQSNN---LSKTKPKSIKPVKVIKR 1566

Query: 184  RR 179
            +R
Sbjct: 1567 KR 1568


>AE014298-1066|AAF46278.2| 1590|Drosophila melanogaster CG2175-PA,
            isoform A protein.
          Length = 1590

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
 Frame = -1

Query: 535  TPYSGSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRAPNKRVIRATRKLNPLT 356
            +PY+   K   ++     +P PK+        ++S    K+ + P K + +  ++ + +T
Sbjct: 1451 SPYAMRGKFVRRRSTARRVPIPKIGKASDEVWVRSPRQAKMPQRPKKSMSKPKKQSSQVT 1510

Query: 355  NNKAM--LKLNPYAAVLKRKAILELRRRKNLKALADAEKSGLKLSKRNP-AMKAEKLRER 185
                +   KL+    VLK    L++++ K    L     +   LSK  P ++K  K+ +R
Sbjct: 1511 TQATVSSTKLDSLVDVLKDLVRLQIQKEKKSSLLRTQSNN---LSKTKPKSIKPVKVIKR 1567

Query: 184  RR 179
            +R
Sbjct: 1568 KR 1569


>BT021245-1|AAX33393.1| 1823|Drosophila melanogaster RE64082p
           protein.
          Length = 1823

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -1

Query: 523 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRA 404
           G W+   +Q+K    P+PK  N  + ++  S E R  +R+
Sbjct: 598 GGWEQQQQQQKQSQPPRPKRPNGKMLQMQNSTESRDGMRS 637


>AF243382-1|AAF68440.1| 1548|Drosophila melanogaster cytoplasmic
           protein encore protein.
          Length = 1548

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -1

Query: 523 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRA 404
           G W+   +Q+K    P+PK  N  + ++  S E R  +R+
Sbjct: 449 GGWEQQQQQQKQSQPPRPKRPNGKMLQMQNSTESRDGMRS 488


>AE014296-703|AAF47799.2| 1818|Drosophila melanogaster CG10847-PB,
           isoform B protein.
          Length = 1818

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -1

Query: 523 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRA 404
           G W+   +Q+K    P+PK  N  + ++  S E R  +R+
Sbjct: 593 GGWEQQQQQQKQSQPPRPKRPNGKMLQMQNSTESRDGMRS 632


>AE014296-702|AAS64963.1| 1823|Drosophila melanogaster CG10847-PA,
           isoform A protein.
          Length = 1823

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -1

Query: 523 GSWKTPSKQKKNFNLPQPKMANTDLTRLLKSDEIRKVLRA 404
           G W+   +Q+K    P+PK  N  + ++  S E R  +R+
Sbjct: 598 GGWEQQQQQQKQSQPPRPKRPNGKMLQMQNSTESRDGMRS 637


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,471,111
Number of Sequences: 53049
Number of extensions: 536099
Number of successful extensions: 1727
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1727
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)