Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_F14
         (740 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr...    30   2.0  
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical...    29   4.6  
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical...    29   4.6  
Z81593-10|CAI94504.1|  349|Caenorhabditis elegans Hypothetical p...    28   8.0  

>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
           protein ZK287.4 protein.
          Length = 1208

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
 Frame = -3

Query: 675 PDHQIPDSXHQPPPDLTSISINPL--------TPX*KEFA-PGLKPPLSSEAPSAYLTPS 523
           P H I  S   PPPD   IS NP+        TP    +  P L PP ++ +P   L P 
Sbjct: 652 PTHYIVPSQSSPPPDPYVIS-NPIPTLSPTAGTPSFNIYPYPSLPPPTTTISPLPTLLPP 710

Query: 522 SLGMXKGVSPPYFQVNDESQASRLISRHST 433
           ++      SPP    N++S  SR I   +T
Sbjct: 711 NISYV--TSPP---DNNDSPCSRSIYGDAT 735


>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18b protein.
          Length = 1459

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
 Frame = -3

Query: 723  PXXIKPPXPXDXGYINPDHQIPDSXHQPPP-DLTSISINPLTPX*KEFAPGLKPPLSSEA 547
            P  +KPP P      +P    P     PPP  +     NP+           + P+++EA
Sbjct: 1157 PNLVKPP-PVQVVAPSPSVIPPPILPPPPPAGVIGQQRNPI-------GGARQVPVAAEA 1208

Query: 546  PSAYLTPSSLGMXKGVSPP 490
            P+A   PS   + +G SPP
Sbjct: 1209 PAAAAAPSRARVPRGPSPP 1227


>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
            protein Y57A10A.18a protein.
          Length = 1456

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
 Frame = -3

Query: 723  PXXIKPPXPXDXGYINPDHQIPDSXHQPPP-DLTSISINPLTPX*KEFAPGLKPPLSSEA 547
            P  +KPP P      +P    P     PPP  +     NP+           + P+++EA
Sbjct: 1157 PNLVKPP-PVQVVAPSPSVIPPPILPPPPPAGVIGQQRNPI-------GGARQVPVAAEA 1208

Query: 546  PSAYLTPSSLGMXKGVSPP 490
            P+A   PS   + +G SPP
Sbjct: 1209 PAAAAAPSRARVPRGPSPP 1227


>Z81593-10|CAI94504.1|  349|Caenorhabditis elegans Hypothetical
           protein T20B3.15 protein.
          Length = 349

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = -1

Query: 269 VFDPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEVYRQLVDPRHV-SSD 93
           ++D +C F+   +  + YD I T  +      LS S  AS+ S    R L+    V S  
Sbjct: 235 IYDETCVFNYDNYCYIPYDQINTSKQGQSICELSGSNLASIRSGNENRFLMSTVSVFSIF 294

Query: 92  SFGVYVKS*SLIL 54
           + G +  S  LIL
Sbjct: 295 AIGGFAFSDDLIL 307


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,102,731
Number of Sequences: 27780
Number of extensions: 305932
Number of successful extensions: 927
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 927
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)