Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_F13
(769 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 42 1e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.026
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.059
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.078
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.10
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 31 0.24
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 29 0.73
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.97
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 0.97
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.97
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 3.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 3.9
SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr 2|... 27 3.9
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 3.9
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 26 6.8
SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces p... 25 9.0
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 41.5 bits (93), Expect = 1e-04
Identities = 28/86 (32%), Positives = 29/86 (33%), Gaps = 3/86 (3%)
Frame = +1
Query: 466 PXSXPXXPXXXXXXXSSXPPPPXIPPXPSXPPPXXPSXSXXPXXPPXXQKXXXLPGQPHX 645
P S P P S PP PP PS PPP S P P P QP
Sbjct: 124 PPSAPAPPTPQ----SELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAA 179
Query: 646 PV---PXWXPLPXXXXPXSPRXXXXP 714
PV P LP P P+ P
Sbjct: 180 PVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 33.5 bits (73), Expect = 0.034
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +1
Query: 454 PXXXPXSXPXXPXXXXXXXSSXPPPPXIPPXPSXPPPXXPS-XSXXPXXPP 603
P P S P P SS PPP P P PP PS S P PP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQ-PAAPVKSPPSAPSLPSAVPPMPP 199
Score = 29.1 bits (62), Expect = 0.73
Identities = 23/96 (23%), Positives = 26/96 (27%), Gaps = 2/96 (2%)
Frame = +1
Query: 367 PPXXXXXPXXXXXXXXXPXXXXPXXXRLXPXXXPXSXPXXPXXXXXXXSSXPPPPX-IPP 543
PP P P P L P P + P S+ PP P +PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Query: 544 XP-SXPPPXXPSXSXXPXXPPXXQKXXXLPGQPHXP 648
P S P S PP P P
Sbjct: 204 PPLSQAPVANTSSRPSSFAPPAGHAPNVTSESPKFP 239
Score = 27.1 bits (57), Expect = 3.0
Identities = 23/104 (22%), Positives = 28/104 (26%), Gaps = 8/104 (7%)
Frame = +1
Query: 367 PPXXXXXPXXXXXXXXXPXXXXPXXXRLXPXXXPXSXPXXPXXXXXXXSSXPPPP----X 534
PP P P P P P S P P PPPP
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Query: 535 IPPXPSXP----PPXXPSXSXXPXXPPXXQKXXXLPGQPHXPVP 654
+ S P PP + + P + +P PVP
Sbjct: 211 VANTSSRPSSFAPPAGHAPNVTSESPKFPNRGPSIPSASVPPVP 254
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.9 bits (74), Expect = 0.026
Identities = 25/88 (28%), Positives = 27/88 (30%)
Frame = +1
Query: 454 PXXXPXSXPXXPXXXXXXXSSXPPPPXIPPXPSXPPPXXPSXSXXPXXPPXXQKXXXLPG 633
P S P P +S PP P P P PP P S P P LP
Sbjct: 393 PAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLP-PSAPPSLPMGAPAAPPLP- 450
Query: 634 QPHXPVPXWXPLPXXXXPXSPRXXXXPP 717
P P+ P P P PP
Sbjct: 451 -PSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 33.1 bits (72), Expect = 0.045
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 2/72 (2%)
Frame = +1
Query: 478 PXXPXXXXXXXSSXPP--PPXIPPXPSXPPPXXPSXSXXPXXPPXXQKXXXLPGQPHXPV 651
P P S PP PP +P PP PS P P LP P P
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP--PAAPA 475
Query: 652 PXWXPLPXXXXP 687
P P P P
Sbjct: 476 PPPAPAPAPAAP 487
Score = 29.5 bits (63), Expect = 0.55
Identities = 14/50 (28%), Positives = 16/50 (32%)
Frame = +1
Query: 454 PXXXPXSXPXXPXXXXXXXSSXPPPPXIPPXPSXPPPXXPSXSXXPXXPP 603
P P + P P P P PP P+ P P P PP
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/63 (25%), Positives = 19/63 (30%)
Frame = +1
Query: 466 PXSXPXXPXXXXXXXSSXPPPPXIPPXPSXPPPXXPSXSXXPXXPPXXQKXXXLPGQPHX 645
P S P S P PP IPP + P+ P P +P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPL 292
Query: 646 PVP 654
P P
Sbjct: 293 PPP 295
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/33 (33%), Positives = 13/33 (39%)
Frame = +1
Query: 466 PXSXPXXPXXXXXXXSSXPPPPXIPPXPSXPPP 564
P S P P ++ P PP P P P P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 25.4 bits (53), Expect = 9.0
Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 4/51 (7%)
Frame = +1
Query: 511 SSXPPPPXIPPXPSX-PPPXXPSXS---XXPXXPPXXQKXXXLPGQPHXPV 651
+S PP P PS PP PS S P PP P P P+
Sbjct: 225 TSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPI 275
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.059
Identities = 19/62 (30%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Frame = +1
Query: 454 PXXXPXSXPXXPXXXXXXXSSXPPPPX-IPPXPSXPP-PXXPSXSXXPXXPPXXQKXXXL 627
P P P + PPPP +PP PS PP P P + P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Query: 628 PG 633
PG
Sbjct: 1746 PG 1747
Score = 29.9 bits (64), Expect = 0.42
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = +1
Query: 448 LXPXXXPXSXPXXPXXXXXXXSSXPPPPXIPPXPSXPPPXXPSXSXXPXXPP 603
+ P + P P S P PP PP S PPP PS P PP
Sbjct: 1681 MAPAHPVSTPPVRPQSAAPPQMSAPTPP--PPPMSVPPP--PSAPPMPAGPP 1728
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +1
Query: 526 PPXIPPXPSXPPPXXPSXSXXPXXPPXXQKXXXLP 630
PP P P+ P P P S PP Q +P
Sbjct: 1355 PPVRPAVPTSPKPQIPDSSNVHAPPPPVQPMNAMP 1389
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/45 (28%), Positives = 14/45 (31%)
Frame = +2
Query: 599 PXXPKKXXXXRASPTXPSXXGXRXPXPXPPXLPGPPXXPXXPXXP 733
P P R P P P P +P PP P P P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGP 1727
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Frame = +2
Query: 572 HPXLXPLAFPXXPKKXXXXRAS-PTXPSXXGXRXPXPXPPXLP-GPPXXPXXP 724
HP P P P+ + S PT P P P P +P GPP P P
Sbjct: 1685 HPVSTP---PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.3 bits (70), Expect = 0.078
Identities = 26/88 (29%), Positives = 26/88 (29%)
Frame = -3
Query: 716 GGXXXXRGEXGXXXXGSGXQXGTGXWGWPGXXXXFWXXGGXXGXXEXDGXXGGGXXGXGG 537
G RG G G G G G PG F GG G GGG G G
Sbjct: 177 GNLFHHRGHNGGGFGGFGGGSGGPPPG-PGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEG 235
Query: 536 MXGGGGXEEXXXXXXXGXXGXXXGXXXG 453
GG G G G G G
Sbjct: 236 GPGGFGGGPGGFGGGLGGFGGGPGGFGG 263
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.9 bits (69), Expect = 0.10
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +1
Query: 529 PXIPPXPSXPPPXXPSXSXXPXXPPXXQKXXXLP--GQPHXPVP 654
P +PP PP PS P PP P G P PVP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 31.1 bits (67), Expect = 0.18
Identities = 32/113 (28%), Positives = 36/113 (31%), Gaps = 13/113 (11%)
Frame = +1
Query: 433 PXXXRLXPXXXPXSXPXXPXXXXXXXSSXPPPPX----IP--PXPSXPPPXXPSXSXXPX 594
P P P S P P S+ PP P IP P PS PP P+ S P
Sbjct: 1035 PVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPV-PAPSGIPP 1093
Query: 595 XPPXXQKXXXLP----GQPHXPVPXWXP---LPXXXXPXSPRXXXXPPXXQXS 732
P +P P P P P P P P PP + S
Sbjct: 1094 VPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPS 1146
Score = 30.3 bits (65), Expect = 0.32
Identities = 24/80 (30%), Positives = 27/80 (33%), Gaps = 9/80 (11%)
Frame = +1
Query: 520 PPPPXIPPXP----SXPPPXXPSXSXXPXXPPXXQKXXXLP--GQPHXPVPXW---XPLP 672
P P IPP P + PP PS + P P P P PVP P P
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Query: 673 XXXXPXSPRXXXXPPXXQXS 732
P P PP + S
Sbjct: 1146 SVAAPPVPAPSGAPPVPKPS 1165
Score = 27.5 bits (58), Expect = 2.2
Identities = 20/88 (22%), Positives = 23/88 (26%)
Frame = +1
Query: 454 PXXXPXSXPXXPXXXXXXXSSXPPPPXIPPXPSXPPPXXPSXSXXPXXPPXXQKXXXLPG 633
P P P P P P PP P P + PP + +P
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPP-VPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 634 QPHXPVPXWXPLPXXXXPXSPRXXXXPP 717
P P P P P PP
Sbjct: 1191 VPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 27.5 bits (58), Expect = 2.2
Identities = 16/58 (27%), Positives = 17/58 (29%)
Frame = +1
Query: 514 SXPPPPXIPPXPSXPPPXXPSXSXXPXXPPXXQKXXXLPGQPHXPVPXWXPLPXXXXP 687
S PP P PP P+ P PP P PVP P P
Sbjct: 1165 SVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/58 (27%), Positives = 18/58 (31%), Gaps = 4/58 (6%)
Frame = +2
Query: 563 PXGHPXLXPLAFPXXPKKXXXXRASPTXPSXXGXRXPXPXP----PXLPGPPXXPXXP 724
P HP PL+ P P P P P P P +P P P P
Sbjct: 987 PKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVP 1044
Score = 27.1 bits (57), Expect = 3.0
Identities = 25/105 (23%), Positives = 29/105 (27%)
Frame = +1
Query: 418 PXXXXPXXXRLXPXXXPXSXPXXPXXXXXXXSSXPPPPXIPPXPSXPPPXXPSXSXXPXX 597
P P +L P P S+ PP P IP S PP S
Sbjct: 1007 PLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVP-IP--TSTPPVPKSSSGAPSAP 1063
Query: 598 PPXXQKXXXLPGQPHXPVPXWXPLPXXXXPXSPRXXXXPPXXQXS 732
PP +P P P P P PP + S
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPS 1108
Score = 25.4 bits (53), Expect = 9.0
Identities = 19/74 (25%), Positives = 22/74 (29%), Gaps = 6/74 (8%)
Frame = +1
Query: 529 PXIPPXPSXPPPXXPSXSXXPXXPPXXQKXXXLPGQPHXPVP------XWXPLPXXXXPX 690
P +P PP PS + P P P PVP P P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 691 SPRXXXXPPXXQXS 732
P PP + S
Sbjct: 1191 VPPPSEAPPVPKPS 1204
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = +1
Query: 511 SSXPPPPXIPPXPSXPPPXXPSXSXXPXXPPXXQKXXXLPGQPHXPVP 654
++ PPPP + + PP P+ + P PP + G P P P
Sbjct: 1880 AAPPPPPPMALPKAGPPSAAPTSALPPAGPPAG--ATAISGNPGMPAP 1925
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 29.1 bits (62), Expect = 0.73
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +1
Query: 523 PPPXIPPXPSXPPPXXPSXSXXPXXPPXXQKXXXLPGQPHXP 648
P P PP P+ P P P P P LPG+P P
Sbjct: 102 PLPREPPLPNEPVPEEP-LPGEPPLPDEPVPEEPLPGEPPLP 142
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 0.97
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +1
Query: 526 PPXIPPXPSXPPPXXPSXSXXPXXPPXXQK 615
PP PP P PP P P PP K
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVK 34
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
Frame = +1
Query: 520 PPPPXIPP---XPSXPPPXXP 573
PPPP PP PS PPP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.7 bits (61), Expect = 0.97
Identities = 22/64 (34%), Positives = 22/64 (34%)
Frame = -3
Query: 716 GGXXXXRGEXGXXXXGSGXQXGTGXWGWPGXXXXFWXXGGXXGXXEXDGXXGGGXXGXGG 537
GG RG G G G G G G G GG G G GG G GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGG-FGGGRGGARGGGRG-GARGGRGGRGGARGGRGGSSGGRGG 66
Query: 536 MXGG 525
GG
Sbjct: 67 AKGG 70
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 28.7 bits (61), Expect = 0.97
Identities = 14/51 (27%), Positives = 19/51 (37%)
Frame = +1
Query: 520 PPPPXIPPXPSXPPPXXPSXSXXPXXPPXXQKXXXLPGQPHXPVPXWXPLP 672
PP P + P PPP + + P PP + + P P P P
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 26.6 bits (56), Expect = 3.9
Identities = 15/52 (28%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Frame = +1
Query: 433 PXXXRLXPXXXPXSXPXXPXXXXXXXSSXPPPPX--IPPXPSXPPPXXPSXS 582
P + P P P P PPPP P PPP P+ S
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVS 786
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/49 (32%), Positives = 17/49 (34%), Gaps = 4/49 (8%)
Frame = +1
Query: 520 PPPPXIPPXPSXP----PPXXPSXSXXPXXPPXXQKXXXLPGQPHXPVP 654
PPP I P P+ PP P P PP P P P P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = +1
Query: 520 PPPPXIPPXPSXPPPXXPSXSXXPXXPPXXQK--XXXLPGQPHXPVPXWXPL 669
P P +P PS P P P+ P P Q+ +P P P P P+
Sbjct: 623 PAVPVVPEAPSVPQP--PAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPV 672
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +1
Query: 520 PPPPXIPPXPSXP-PPXXPSXSXXPXXPPXXQKXXXLPGQPHXPVPXWXPL 669
P P +P PS P PP P P P +P P P P P+
Sbjct: 593 PVAPVVPEAPSVPQPPVAPVAPEVPSV-PQRPAVPVVPEAPSVPQPPAAPV 642
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 520 PPPPXIPPXPSXPPPXXPSXSXXPXXPP 603
PPP PP + P PS P PP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPP 194
>SPBC83.18c |||C2 domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 272
Score = 26.6 bits (56), Expect = 3.9
Identities = 15/55 (27%), Positives = 19/55 (34%)
Frame = +1
Query: 523 PPPXIPPXPSXPPPXXPSXSXXPXXPPXXQKXXXLPGQPHXPVPXWXPLPXXXXP 687
P P P PS P P P PP ++ +P + PLP P
Sbjct: 154 PVPKKPSKPSKPRKKVPVSHPLPPTPPSREEHVSVPRESSLFTYEDDPLPSFPSP 208
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = +1
Query: 520 PPPPXIPPXPSXPPPXXPSXSXXPXXPPXXQKXXXLPGQPHXPVPXWXPLP 672
PP +PP P P + S P PP PG P P P + +P
Sbjct: 500 PPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALP---PGMP-APFPGYPAVP 546
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 25.8 bits (54), Expect = 6.8
Identities = 14/46 (30%), Positives = 17/46 (36%)
Frame = +1
Query: 514 SXPPPPXIPPXPSXPPPXXPSXSXXPXXPPXXQKXXXLPGQPHXPV 651
S P P +PP P P S + P PP L + PV
Sbjct: 574 SRPSPLSLPPEPLLSPTIDYSATPFPLEPPPESPGPSLQIPSNNPV 619
>SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 25.4 bits (53), Expect = 9.0
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = -3
Query: 323 LRSLISNLXNTCDLTPLPEWSCEQSAW 243
+RS+ L D+TP+ +W ++S W
Sbjct: 109 VRSIEQELEQLRDVTPINQWKRKRSLW 135
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,274,145
Number of Sequences: 5004
Number of extensions: 14907
Number of successful extensions: 209
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -