Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_F07
         (978 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0091 + 13312904-13313647                                         29   4.3  
08_02_1606 - 28194138-28194845                                         29   7.5  
05_03_0039 - 7621613-7622695                                           29   7.5  
07_03_0089 - 13300902-13301645                                         28   9.8  

>07_03_0091 + 13312904-13313647
          Length = 247

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 21/72 (29%), Positives = 25/72 (34%), Gaps = 3/72 (4%)
 Frame = +2

Query: 662 PKXKPRPGXXXEPTTXX---PNKQHXXXXXXXXXXXXXTRKKTPQXGPXKXTRXXAXPTP 832
           PK KP P    +P T     PN Q                K TPQ  P +  +    P P
Sbjct: 42  PKPKPDPTPKPQPETKPSPQPNPQPNPQPDPKPSPQPDP-KPTPQPEPKQDPQPNPQPDP 100

Query: 833 EXPPXXDPPXXP 868
           +  P  DP   P
Sbjct: 101 KQSPQPDPKPTP 112


>08_02_1606 - 28194138-28194845
          Length = 235

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +3

Query: 414 HXREDXGTXEGXERPPPXPTHTXKXRXPXKEXXGSRDKPXXP 539
           H  E  GT  G   P      T + R P     GS++KP  P
Sbjct: 10  HDHEMNGTSAGGGEPKDGAVVTGRNRRPRGRPPGSKNKPKPP 51


>05_03_0039 - 7621613-7622695
          Length = 360

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 19/76 (25%), Positives = 23/76 (30%), Gaps = 3/76 (3%)
 Frame = +2

Query: 662 PKXKPRPGXXXEPTTXXPNKQHXXXXXXXXXXXXXTRKKTPQXGPXKXTRXXAXPTPE-- 835
           PK KP+P    EP      K H               +  P   P    +    P P+  
Sbjct: 284 PKPKPKPDPKLEPKPHPEPKPHPMPEPEPKPKPEPKPEPKPYPEPKPKLKPEPKPGPKPI 343

Query: 836 -XPPXXDPPXXPPXXN 880
             P    PP  PP  N
Sbjct: 344 APPNKHKPPHMPPATN 359


>07_03_0089 - 13300902-13301645
          Length = 247

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 19/69 (27%), Positives = 23/69 (33%)
 Frame = +2

Query: 662 PKXKPRPGXXXEPTTXXPNKQHXXXXXXXXXXXXXTRKKTPQXGPXKXTRXXAXPTPEXP 841
           P  KP P    +PT     KQ                K TPQ  P +  +    P P+  
Sbjct: 98  PDPKPSPQPDPKPTPQPDPKQDPQPNPQPDP------KPTPQPNPKQDPQPNPQPDPKPT 151

Query: 842 PXXDPPXXP 868
           P  DP   P
Sbjct: 152 PQPDPKQDP 160


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.308    0.127    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,920,303
Number of Sequences: 37544
Number of extensions: 153696
Number of successful extensions: 506
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2846681820
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)