BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_F05
(829 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 25 3.8
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 24 6.6
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 23 8.7
AJ441131-3|CAD29632.1| 568|Anopheles gambiae putative apyrase/n... 23 8.7
AJ439398-2|CAD28125.1| 568|Anopheles gambiae putative 5' nucleo... 23 8.7
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 23 8.7
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 24.6 bits (51), Expect = 3.8
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 19 GLPRTNHPGAGLSLNRSQHDAALPSTTP 102
GLP+ P AG SLN S A + P
Sbjct: 594 GLPQVPQPPAGSSLNLSHPSAGMVPQPP 621
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
FGF-signaling promoter protein.
Length = 1197
Score = 23.8 bits (49), Expect = 6.6
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 408 TGPLGXXXEPXVRXRRPPSGTDPXXPTA 491
T LG +R PSGT+P PT+
Sbjct: 349 TDILGKALRQQTVLQRTPSGTEPKTPTS 376
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 23.4 bits (48), Expect = 8.7
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +1
Query: 22 LPRTNHPGAGLSLNRSQHDAALPSTTPRQERKSSTDYP 135
L ++H GA LN +Q + + + T R D P
Sbjct: 94 LKNSSHSGASSGLNTTQVNTTISAGTQNHLRLPKVDLP 131
>AJ441131-3|CAD29632.1| 568|Anopheles gambiae putative
apyrase/nucleotidase protein.
Length = 568
Score = 23.4 bits (48), Expect = 8.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 48 RAESQQIAARRCSTEHNTPPGTEVVYRLS 134
R S + R CS H P E VYR++
Sbjct: 485 RVVSVSLRCRYCSVPHYEPLDPERVYRVA 513
>AJ439398-2|CAD28125.1| 568|Anopheles gambiae putative 5'
nucleotidase protein.
Length = 568
Score = 23.4 bits (48), Expect = 8.7
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 48 RAESQQIAARRCSTEHNTPPGTEVVYRLS 134
R S + R CS H P E VYR++
Sbjct: 485 RVVSVSLRCRYCSVPHYEPLDPEHVYRVA 513
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 23.4 bits (48), Expect = 8.7
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 109 PGGVLCSVEQRRAAIC*DSALRQG 38
PGG+LCS +C R+G
Sbjct: 598 PGGLLCSGPDHGRCVCGQCECREG 621
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.310 0.130 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,281
Number of Sequences: 2352
Number of extensions: 9678
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
- SilkBase 1999-2023 -