Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_F05
(829 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 24 3.1
U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin prote... 29 5.4
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 29 5.4
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 28 7.1
DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homo... 28 7.1
AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditi... 28 7.1
AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditi... 28 7.1
AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein. 28 7.1
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 28 9.4
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 24.2 bits (50), Expect(2) = 3.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 813 GXGXGGGXGFGXXPXGXCG 757
G G GGG G G G CG
Sbjct: 30 GCGGGGGCGGGGGCGGGCG 48
Score = 23.8 bits (49), Expect(2) = 3.1
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2
Query: 648 GXSWXXGGGXGFGPGXGXWCP 586
G + GGG G+G G G P
Sbjct: 46 GCGYGGGGGCGYGGGYGCGIP 66
>U00032-1|AAM48523.1| 1106|Caenorhabditis elegans Rabphilin protein
1, isoform d protein.
Length = 1106
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 28 RTNHPGAGLSLNRSQHDAALPSTT-PRQERKSSTDY 132
RT+ G+ SLNR Q DA PST+ +R+ ST +
Sbjct: 106 RTSKRGSSKSLNRPQIDADEPSTSGTNPDRRPSTHF 141
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/57 (24%), Positives = 19/57 (33%)
Frame = +2
Query: 473 PXXPNGXRPTPPSXXXNPTLGATKGXXXXXXXXXLXXRGHQXPXPGPKPXPPPXXQE 643
P P + P+ P+ +T+ R P P P P PPP E
Sbjct: 262 PPTPTSRPTSAPTIPPQPSANSTRAPDIGKTLSTQPPRRTPQPHPKPPPPPPPPIHE 318
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 822 RGXGXGXGGGXGFGXXPXGXCGR 754
RG G G GGG G+G G GR
Sbjct: 40 RGGGYGGGGGGGYGGGGYGGGGR 62
>DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homolog
protein.
Length = 578
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 93 HN-TPPGTEVVYRLSRAPTSN*VISGPSEP*CTCXXXNR*HRSPRSKXASTSRLAF 257
HN +P G EV + N VI+GPSE CTC + S +SK + + A+
Sbjct: 168 HNYSPDGPEV----GISKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform a protein.
Length = 578
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 93 HN-TPPGTEVVYRLSRAPTSN*VISGPSEP*CTCXXXNR*HRSPRSKXASTSRLAF 257
HN +P G EV + N VI+GPSE CTC + S +SK + + A+
Sbjct: 168 HNYSPDGPEV----GISKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform b protein.
Length = 550
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 93 HN-TPPGTEVVYRLSRAPTSN*VISGPSEP*CTCXXXNR*HRSPRSKXASTSRLAF 257
HN +P G EV + N VI+GPSE CTC + S +SK + + A+
Sbjct: 168 HNYSPDGPEV----GISKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein.
Length = 550
Score = 28.3 bits (60), Expect = 7.1
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 93 HN-TPPGTEVVYRLSRAPTSN*VISGPSEP*CTCXXXNR*HRSPRSKXASTSRLAF 257
HN +P G EV + N VI+GPSE CTC + S +SK + + A+
Sbjct: 168 HNYSPDGPEV----GISKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 819 GXGXGXGGGXGFGXXPXGXC 760
G G G GGG G G P G C
Sbjct: 236 GGGYGMGGGGGGGGCPNGEC 255
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.310 0.130 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,443,326
Number of Sequences: 27780
Number of extensions: 221943
Number of successful extensions: 866
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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