Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP15_T7_F03
(822 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 32 0.57
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 1.7
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 30 1.7
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 30 1.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 1.7
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 4.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.3
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 28 7.0
U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protei... 28 9.3
M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein. 28 9.3
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 28 9.3
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 31.9 bits (69), Expect = 0.57
Identities = 24/91 (26%), Positives = 30/91 (32%)
Frame = +2
Query: 479 ERPPPXTXPTPXGKNXAGXXTXRAPXPPGPXTXGXTTHTXXXNPGXXXRXRXXPXXRXXT 658
+ P P P+P + + P PGP + PG P R
Sbjct: 202 DEPSPSGPPSPGPVDPSEDPKPSEPPSPGPVDPSDEP-SPSDPPGPPGPP--GPPTRRPP 258
Query: 659 XXXXPPTTKRPGXXXXAXPPPRGPPXXPXHH 751
PPT + PG PP R PP HH
Sbjct: 259 GPPGPPTRRPPGPPG---PPTRRPPGHQGHH 286
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/82 (23%), Positives = 23/82 (28%), Gaps = 1/82 (1%)
Frame = +2
Query: 491 PXTXPTPXGKNXAGXXTXRA-PXPPGPXTXGXTTHTXXXNPGXXXRXRXXPXXRXXTXXX 667
P P+P G G P P GP + G + P P
Sbjct: 95 PSDEPSPSGPPSPGPVNPSEDPQPSGPPSPGPVDPSEDPQPSVEPSEDHQPSGPPSPGPV 154
Query: 668 XPPTTKRPGXXXXAXPPPRGPP 733
P +P P P GPP
Sbjct: 155 DPSEDPQPSVEPSEDPQPSGPP 176
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/82 (25%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Frame = +2
Query: 491 PXTXPTPX-GKNXAGXXTXRAPXPPGPXTXGXTTHTXXXNPGXXXRXRXXPXXRXXTXXX 667
P P P G +G P PP P + PG R P
Sbjct: 241 PGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPP 300
Query: 668 XPPTTKRPGXXXXAXPPPRGPP 733
PP + PG PP PP
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPP 322
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/91 (27%), Positives = 27/91 (29%), Gaps = 2/91 (2%)
Frame = +2
Query: 485 PPPXTXPTPXGKNXAGXXTXRAPXPPGPXTXGXTTHTXXXNPGXXXRXRXXPXXRXXTXX 664
PPP P P G+ P PP P G P P R
Sbjct: 297 PPPP--PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP-------PPPGMRYPGGM 347
Query: 665 XXPPTTKRP--GXXXXAXPPPRGPPXXPXHH 751
PP + P G PPP PP P H
Sbjct: 348 PPPPPPRYPSAGPGMYPPPPPSRPPAPPSGH 378
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +2
Query: 446 PETAGXSRTXXERPPPXTXPTPXGKNXAGXXTXRAPXPPGPXTXG 580
P++ G + PPP P P G G P PP P G
Sbjct: 617 PQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAG 661
Score = 25.0 bits (52), Expect(2) = 4.5
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +2
Query: 485 PPPXTXPTPXGKNXAGXXTXRAPXPPGPXTXG 580
PPP P P A + P PP P G
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMG 640
Score = 22.2 bits (45), Expect(2) = 4.5
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +2
Query: 671 PPTTKRPGXXXXAXPPPRGPP 733
PP P A PPP PP
Sbjct: 636 PPPMGLPAVGAGAPPPPPPPP 656
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +2
Query: 446 PETAGXSRTXXERPPPXTXPTPXGKNXAGXXTXRAPXPPGPXTXG 580
P++ G + PPP P P G G P PP P G
Sbjct: 443 PQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAG 487
Score = 25.0 bits (52), Expect(2) = 4.6
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +2
Query: 485 PPPXTXPTPXGKNXAGXXTXRAPXPPGPXTXG 580
PPP P P A + P PP P G
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMG 466
Score = 22.2 bits (45), Expect(2) = 4.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +2
Query: 671 PPTTKRPGXXXXAXPPPRGPP 733
PP P A PPP PP
Sbjct: 462 PPPMGLPAVGAGAPPPPPPPP 482
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/82 (25%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Frame = +2
Query: 491 PXTXPTPX-GKNXAGXXTXRAPXPPGPXTXGXTTHTXXXNPGXXXRXRXXPXXRXXTXXX 667
P P P G +G P PP P + PG R P
Sbjct: 251 PGYQPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPP 310
Query: 668 XPPTTKRPGXXXXAXPPPRGPP 733
PP + PG PP PP
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPP 332
Score = 29.9 bits (64), Expect = 2.3
Identities = 25/91 (27%), Positives = 27/91 (29%), Gaps = 2/91 (2%)
Frame = +2
Query: 485 PPPXTXPTPXGKNXAGXXTXRAPXPPGPXTXGXTTHTXXXNPGXXXRXRXXPXXRXXTXX 664
PPP P P G+ P PP P G P P R
Sbjct: 307 PPPP--PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPP-------PPPGMRYPGGM 357
Query: 665 XXPPTTKRP--GXXXXAXPPPRGPPXXPXHH 751
PP + P G PPP PP P H
Sbjct: 358 PPPPPPRYPSAGPGMYPPPPPSRPPAPPSGH 388
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/87 (22%), Positives = 23/87 (26%), Gaps = 1/87 (1%)
Frame = +2
Query: 485 PPPXTXPTPXGKNXAGXXTXRAPXPPGPXTXGXTTHTXXXNPGXXXRXRXXPXXRXXTXX 664
P P P P + G P P GP G + PG +
Sbjct: 936 PKPNPGPGPGPPSPNGPSDPNKPSPNGPSPNGPNGPSDPNKPGPSGPNGPSDPNKPSPNG 995
Query: 665 XXPPTTKRPGXXXXAXPPPRGP-PXXP 742
P P P P GP P P
Sbjct: 996 PSDPVKPSPSGPSPNGPSPNGPSPNGP 1022
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 5.3
Identities = 17/63 (26%), Positives = 24/63 (38%)
Frame = +2
Query: 386 NPADGSHXNTGRAXXCXNQXPETAGXSRTXXERPPPXTXPTPXGKNXAGXXTXRAPXPPG 565
N G+ NT ++ ++ SR+ PPP P P + T P PP
Sbjct: 1305 NNRRGNRRNTNEHIQANHEDSDSFSTSRSSSPSPPPPPPPPPP---PSDDLTPVPPPPPP 1361
Query: 566 PXT 574
P T
Sbjct: 1362 PPT 1364
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 28.3 bits (60), Expect = 7.0
Identities = 24/98 (24%), Positives = 33/98 (33%), Gaps = 4/98 (4%)
Frame = +2
Query: 281 KPHGSEPPDSRGSXA-EHILARIRXGXPRXPQAFXXNP-ADGSHXNTGRAXXCXNQXPET 454
KP G +P A + + + G P P+ +P A S A +
Sbjct: 105 KPRGGDPAGKPNPPAGDPSKTKPQGGDPAKPKPQTGDPYATNSTVKPATAPVTPEPTVKN 164
Query: 455 AGXSRTXXERPPPXTX--PTPXGKNXAGXXTXRAPXPP 562
+ E PPP T P P T +AP PP
Sbjct: 165 TTAAEPTTEAPPPPTTKAPPPPTTKAPPPPTTKAPPPP 202
>U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protein 8
protein.
Length = 282
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +2
Query: 671 PPTTKRPGXXXXAXPP-PRGPP 733
P T RPG A PP PRGPP
Sbjct: 200 PGTEYRPGQAGRAGPPGPRGPP 221
>M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein.
Length = 282
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +2
Query: 671 PPTTKRPGXXXXAXPP-PRGPP 733
P T RPG A PP PRGPP
Sbjct: 200 PGTEYRPGQAGRAGPPGPRGPP 221
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/89 (24%), Positives = 25/89 (28%), Gaps = 3/89 (3%)
Frame = +2
Query: 485 PPPXTXPTPXGKNXAGXXTXRAPXPP---GPXTXGXTTHTXXXNPGXXXRXRXXPXXRXX 655
PPP P + G + R P PP G T + R P
Sbjct: 43 PPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKG 102
Query: 656 TXXXXPPTTKRPGXXXXAXPPPRGPPXXP 742
T PP T P R PP P
Sbjct: 103 TGTPPPPPTGEPQDLSGEGNASRRPPPPP 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,181,405
Number of Sequences: 27780
Number of extensions: 232233
Number of successful extensions: 679
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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