Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_E21
         (785 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0515 - 3864796-3865425                                           30   1.8  
12_02_1174 - 26696869-26698191                                         29   3.2  
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866...    28   7.3  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    28   9.7  

>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/58 (27%), Positives = 16/58 (27%)
 Frame = +2

Query: 563 PPPPXXGXRXXPPLXXRXXXXXXXXXXXPXXSPXPXXXPXXPXPXXXPXXXXXXXXPP 736
           PPPP  G    PP               P   P P   P  P P   P        PP
Sbjct: 61  PPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPP 118



 Score = 29.1 bits (62), Expect = 4.2
 Identities = 13/36 (36%), Positives = 13/36 (36%)
 Frame = +1

Query: 559 PXPPPXXXXSAXPPXLXPXXXXXXXXXXXPXXXPPP 666
           P PPP    S  PP L P           P   PPP
Sbjct: 73  PPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPP 108


>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 17/67 (25%), Positives = 17/67 (25%)
 Frame = +2

Query: 557 PXPPPPXXGXRXXPPLXXRXXXXXXXXXXXPXXSPXPXXXPXXPXPXXXPXXXXXXXXPP 736
           P PPPP    R  PP               P   P P   P  P     P        PP
Sbjct: 124 PPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPP 183

Query: 737 XXXXXXP 757
                 P
Sbjct: 184 SLQPPSP 190



 Score = 28.3 bits (60), Expect = 7.3
 Identities = 17/75 (22%), Positives = 17/75 (22%)
 Frame = +1

Query: 559 PXPPPXXXXSAXPPXLXPXXXXXXXXXXXPXXXPPPXXXXXXPXXXXGPXXXXXXXXPXX 738
           P PPP       PP   P           P   PPP      P     P        P  
Sbjct: 125 PPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPS 184

Query: 739 XXXXXPXXXXXXXPP 783
                P       PP
Sbjct: 185 LQPPSPPPPPPTRPP 199


>09_06_0277 -
           21983049-21983080,21983250-21984788,21986619-21986655,
           21987612-21987665,21987781-21987893,21988272-21988660,
           21988783-21988903,21989245-21989342,21989963-21990153
          Length = 857

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 16/67 (23%), Positives = 17/67 (25%)
 Frame = +2

Query: 557 PXPPPPXXGXRXXPPLXXRXXXXXXXXXXXPXXSPXPXXXPXXPXPXXXPXXXXXXXXPP 736
           P PPPP       PP+              P   P P      P P   P        PP
Sbjct: 378 PPPPPPMSPSCLLPPIIPAPTFTYSSPPPPPLYYPPPPDISPSPPPSVTPLPPVVYPSPP 437

Query: 737 XXXXXXP 757
                 P
Sbjct: 438 EVTPSPP 444


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 16/60 (26%), Positives = 16/60 (26%)
 Frame = +2

Query: 557 PXPPPPXXGXRXXPPLXXRXXXXXXXXXXXPXXSPXPXXXPXXPXPXXXPXXXXXXXXPP 736
           P PPP        PP               P  SP P   P  P P   P        PP
Sbjct: 82  PPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPREAQLAPP 141


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,244,888
Number of Sequences: 37544
Number of extensions: 216634
Number of successful extensions: 853
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)