SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP15_T7_E14
         (803 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL096764-2|CAM28218.1| 1137|Homo sapiens chromosome X open readi...    33   0.91 
AL049563-1|CAM28289.1| 1137|Homo sapiens chromosome X open readi...    33   0.91 
BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, mem...    33   1.6  
AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, mem...    33   1.6  
AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein pro...    33   1.6  
X67337-1|CAA47752.1|  551|Homo sapiens Human pre-mRNA cleavage f...    31   3.7  
X67336-1|CAA47751.1|  551|Homo sapiens HPBRII-7 protein.               31   3.7  
BC000714-1|AAH00714.1|  588|Homo sapiens CPSF6 protein protein.        31   3.7  
AK223568-1|BAD97288.1|  551|Homo sapiens cleavage and polyadenyl...    31   3.7  
K02575-1|AAA36502.1|  173|Homo sapiens protein ( Human salivary ...    31   4.9  
BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor, argini...    31   4.9  
BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor, argini...    31   4.9  
BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor, argini...    31   4.9  
BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor, argini...    31   4.9  
AL117417-1|CAB55911.1|  667|Homo sapiens hypothetical protein pr...    31   4.9  
AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR pr...    31   4.9  
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.     31   4.9  
AB032998-1|BAA86486.1|  929|Homo sapiens KIAA1172 protein protein.     31   4.9  
AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens ...    30   8.5  

>AL096764-2|CAM28218.1| 1137|Homo sapiens chromosome X open reading
            frame 45 protein.
          Length = 1137

 Score = 33.5 bits (73), Expect = 0.91
 Identities = 15/45 (33%), Positives = 17/45 (37%)
 Frame = +2

Query: 485  PPRAXKXPXGXPPPXXPXXXXXPXXPXSLXXGXRPXXRXPPXXPP 619
            PP     P   PPP  P     P  P +L  G     + PP  PP
Sbjct: 919  PPPPPPPPPPPPPPPPPPPPPPPPPPPALDVGETSNLQPPPPLPP 963


>AL049563-1|CAM28289.1| 1137|Homo sapiens chromosome X open reading
            frame 45 protein.
          Length = 1137

 Score = 33.5 bits (73), Expect = 0.91
 Identities = 15/45 (33%), Positives = 17/45 (37%)
 Frame = +2

Query: 485  PPRAXKXPXGXPPPXXPXXXXXPXXPXSLXXGXRPXXRXPPXXPP 619
            PP     P   PPP  P     P  P +L  G     + PP  PP
Sbjct: 919  PPPPPPPPPPPPPPPPPPPPPPPPPPPALDVGETSNLQPPPPLPP 963


>BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 23/100 (23%), Positives = 28/100 (28%)
 Frame = +2

Query: 482 PPPRAXKXPXGXPPPXXPXXXXXPXXPXSLXXGXRPXXRXPPXXPPXAPXXXXXXXXXXX 661
           P P+    P   PPP  P     P  P  +  G       P   PP +P           
Sbjct: 310 PGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGS------PGTPPPPSPPSFPPHPDFAA 363

Query: 662 XXXXXXXVGSXXPXSPXXPVXXPAXQXXPXEXXXPPVGXP 781
                    +  P  P  P+  P     P     PP G P
Sbjct: 364 PPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPP 403


>AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 23/100 (23%), Positives = 28/100 (28%)
 Frame = +2

Query: 482 PPPRAXKXPXGXPPPXXPXXXXXPXXPXSLXXGXRPXXRXPPXXPPXAPXXXXXXXXXXX 661
           P P+    P   PPP  P     P  P  +  G       P   PP +P           
Sbjct: 310 PGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGS------PGTPPPPSPPSFPPHPDFAA 363

Query: 662 XXXXXXXVGSXXPXSPXXPVXXPAXQXXPXEXXXPPVGXP 781
                    +  P  P  P+  P     P     PP G P
Sbjct: 364 PPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPP 403


>AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein
           protein.
          Length = 498

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 23/100 (23%), Positives = 28/100 (28%)
 Frame = +2

Query: 482 PPPRAXKXPXGXPPPXXPXXXXXPXXPXSLXXGXRPXXRXPPXXPPXAPXXXXXXXXXXX 661
           P P+    P   PPP  P     P  P  +  G       P   PP +P           
Sbjct: 310 PGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGS------PGTPPPPSPPSFPPHPDFAA 363

Query: 662 XXXXXXXVGSXXPXSPXXPVXXPAXQXXPXEXXXPPVGXP 781
                    +  P  P  P+  P     P     PP G P
Sbjct: 364 PPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPPGPP 403


>X67337-1|CAA47752.1|  551|Homo sapiens Human pre-mRNA cleavage
           factor I 68 kDa subunit protein.
          Length = 551

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 24/100 (24%), Positives = 25/100 (25%)
 Frame = +2

Query: 482 PPPRAXKXPXGXPPPXXPXXXXXPXXPXSLXXGXRPXXRXPPXXPPXAPXXXXXXXXXXX 661
           PPP     P    PP        P        G  P    PP  PP  P           
Sbjct: 253 PPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPP 312

Query: 662 XXXXXXXVGSXXPXSPXXPVXXPAXQXXPXEXXXPPVGXP 781
                   G   P  P  P+  P     P     PP G P
Sbjct: 313 QQGPPPPPG-PFPPRPPGPLGPPLTLAPPPHLPGPPPGAP 351


>X67336-1|CAA47751.1|  551|Homo sapiens HPBRII-7 protein.
          Length = 551

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 24/100 (24%), Positives = 25/100 (25%)
 Frame = +2

Query: 482 PPPRAXKXPXGXPPPXXPXXXXXPXXPXSLXXGXRPXXRXPPXXPPXAPXXXXXXXXXXX 661
           PPP     P    PP        P        G  P    PP  PP  P           
Sbjct: 253 PPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPP 312

Query: 662 XXXXXXXVGSXXPXSPXXPVXXPAXQXXPXEXXXPPVGXP 781
                   G   P  P  P+  P     P     PP G P
Sbjct: 313 QQGPPPPPG-PFPPRPPGPLGPPLTLAPPPHLPGPPPGAP 351


>BC000714-1|AAH00714.1|  588|Homo sapiens CPSF6 protein protein.
          Length = 588

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 24/100 (24%), Positives = 25/100 (25%)
 Frame = +2

Query: 482 PPPRAXKXPXGXPPPXXPXXXXXPXXPXSLXXGXRPXXRXPPXXPPXAPXXXXXXXXXXX 661
           PPP     P    PP        P        G  P    PP  PP  P           
Sbjct: 290 PPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPP 349

Query: 662 XXXXXXXVGSXXPXSPXXPVXXPAXQXXPXEXXXPPVGXP 781
                   G   P  P  P+  P     P     PP G P
Sbjct: 350 QQGPPPPPG-PFPPRPPGPLGPPLTLAPPPHLPGPPPGAP 388


>AK223568-1|BAD97288.1|  551|Homo sapiens cleavage and
           polyadenylation specific factor 6, 68 kD subunit variant
           protein.
          Length = 551

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 24/100 (24%), Positives = 25/100 (25%)
 Frame = +2

Query: 482 PPPRAXKXPXGXPPPXXPXXXXXPXXPXSLXXGXRPXXRXPPXXPPXAPXXXXXXXXXXX 661
           PPP     P    PP        P        G  P    PP  PP  P           
Sbjct: 253 PPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPP 312

Query: 662 XXXXXXXVGSXXPXSPXXPVXXPAXQXXPXEXXXPPVGXP 781
                   G   P  P  P+  P     P     PP G P
Sbjct: 313 QQGPPPPPG-PFPPRPPGPLGPPLTLAPPPHLPGPPPGAP 351


>K02575-1|AAA36502.1|  173|Homo sapiens protein ( Human salivary
           proline-rich protein 1 gene, segment 1. ).
          Length = 173

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 24/100 (24%), Positives = 26/100 (26%)
 Frame = +2

Query: 482 PPPRAXKXPXGXPPPXXPXXXXXPXXPXSLXXGXRPXXRXPPXXPPXAPXXXXXXXXXXX 661
           PPP+    P G PPP  P     P           P    P   PP              
Sbjct: 22  PPPQGGNKPQGPPPP--PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGKRSRSPRSPPG 79

Query: 662 XXXXXXXVGSXXPXSPXXPVXXPAXQXXPXEXXXPPVGXP 781
                   G   P  P  P   P  Q  P +    P G P
Sbjct: 80  KPQGPPPQGGNQPQGPPPPPGKP--QGPPPQGGNKPQGPP 117


>BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor,
           arginine/serine-rich 15 protein.
          Length = 1147

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
 Frame = +2

Query: 488 PRAXKXPXGXPPPXX-PXXXXXPXXPXSLXXGXRPXXRXPPXXPPXAP 628
           P A   P G PPP   P     P  P  L  G  P    P   PP  P
Sbjct: 697 PPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPP 744


>BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor,
           arginine/serine-rich 15 protein.
          Length = 1147

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
 Frame = +2

Query: 488 PRAXKXPXGXPPPXX-PXXXXXPXXPXSLXXGXRPXXRXPPXXPPXAP 628
           P A   P G PPP   P     P  P  L  G  P    P   PP  P
Sbjct: 697 PPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPP 744


>BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor,
           arginine/serine-rich 15 protein.
          Length = 1146

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
 Frame = +2

Query: 488 PRAXKXPXGXPPPXX-PXXXXXPXXPXSLXXGXRPXXRXPPXXPPXAP 628
           P A   P G PPP   P     P  P  L  G  P    P   PP  P
Sbjct: 697 PPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPP 744


>BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor,
           arginine/serine-rich 15 protein.
          Length = 1147

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
 Frame = +2

Query: 488 PRAXKXPXGXPPPXX-PXXXXXPXXPXSLXXGXRPXXRXPPXXPPXAP 628
           P A   P G PPP   P     P  P  L  G  P    P   PP  P
Sbjct: 697 PPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPP 744


>AL117417-1|CAB55911.1|  667|Homo sapiens hypothetical protein
           protein.
          Length = 667

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
 Frame = +2

Query: 488 PRAXKXPXGXPPPXX-PXXXXXPXXPXSLXXGXRPXXRXPPXXPPXAP 628
           P A   P G PPP   P     P  P  L  G  P    P   PP  P
Sbjct: 508 PPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPP 555


>AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR
           protein rA4 protein.
          Length = 1157

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
 Frame = +2

Query: 488 PRAXKXPXGXPPPXX-PXXXXXPXXPXSLXXGXRPXXRXPPXXPPXAP 628
           P A   P G PPP   P     P  P  L  G  P    P   PP  P
Sbjct: 707 PPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPP 754


>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
          Length = 1134

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 20/58 (34%), Positives = 20/58 (34%)
 Frame = +2

Query: 455  AXAXXXXXXPPPRAXKXPXGXPPPXXPXXXXXPXXPXSLXXGXRPXXRXPPXXPPXAP 628
            A A      PPP     P   PPP  P     P  P  L    RP    PP  PP  P
Sbjct: 952  ARAPPPPPPPPPHPPLPPPPLPPPPLPLRLP-PLPPPPLP---RPHPPPPPPLPPLLP 1005


>AB032998-1|BAA86486.1|  929|Homo sapiens KIAA1172 protein protein.
          Length = 929

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
 Frame = +2

Query: 488 PRAXKXPXGXPPPXX-PXXXXXPXXPXSLXXGXRPXXRXPPXXPPXAP 628
           P A   P G PPP   P     P  P  L  G  P    P   PP  P
Sbjct: 501 PPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFNPMHLPPGFLPPGPP 548


>AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45135 fis, clone BRAWH3038252, highly  similar
           to Formin 1 isoform IV. ).
          Length = 844

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 15/49 (30%), Positives = 15/49 (30%)
 Frame = +2

Query: 482 PPPRAXKXPXGXPPPXXPXXXXXPXXPXSLXXGXRPXXRXPPXXPPXAP 628
           PPP     P    PP  P     P  P     G  P    PP   P  P
Sbjct: 333 PPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPP 381


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,097,068
Number of Sequences: 237096
Number of extensions: 790173
Number of successful extensions: 3887
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3204
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -